Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0305
         (469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   2.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    24   2.3  
AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding pr...    24   3.0  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    24   3.0  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    24   3.0  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    23   5.3  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   7.0  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    22   9.3  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +1

Query: 145 NKYGLLRD---DCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKY 315
           N YG+L       +HE   + E  R   + + +E   R  R   +  +K    +E+  + 
Sbjct: 424 NLYGMLPGMGMQSIHERMKLEEEHRA--ARLREEERAREAREAAIEREKERELREQRERE 481

Query: 316 EEDSLYLTPIVEQVEKERLEREQWEKE 396
           + +        EQ EKE  ER+Q EKE
Sbjct: 482 QREKEQREK--EQREKEERERQQREKE 506



 Score = 24.2 bits (50), Expect = 2.3
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +1

Query: 349 EQVEKERLEREQWEKE 396
           +Q EKE+ EREQ EKE
Sbjct: 501 QQREKEQREREQREKE 516


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 262 WHVQYGSFSRQQHGMEVCGVLQ 197
           WHV++GS    + G E+   +Q
Sbjct: 128 WHVEWGSERNSEKGEELLSAIQ 149


>AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP51 protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 13/52 (25%), Positives = 21/52 (40%)
 Frame = -3

Query: 335 KYRESSSYFVHSSLGRIVFCMESCMARTIRKFLSSTTWDGSLRSASVTSGVS 180
           ++RE    F  S  G      + C+     +   +  WD S+    V SGV+
Sbjct: 122 EFREQEK-FTKSECGMFALKFQGCIMVESMRNCPAERWDSSVLCEKVRSGVA 172


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = +1

Query: 295 KEEWT----KYEEDSLYLTPIVEQVEKERLERE 381
           KE+W     KY+ ++LY+    E+ +KE ++ E
Sbjct: 95  KEQWDALQKKYDPENLYVEKYREEAKKEGIKLE 127


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = +1

Query: 295 KEEWT----KYEEDSLYLTPIVEQVEKERLERE 381
           KE+W     KY+ ++LY+    E+ +KE ++ E
Sbjct: 95  KEQWDALQKKYDPENLYVEKYREEAKKEGIKLE 127


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 262 WHVQYGSFSRQQHGMEVCGVLQ 197
           WH ++GS    Q G ++  ++Q
Sbjct: 147 WHTEWGSARNSQRGEDLLQLIQ 168


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = -2

Query: 129 VGPFAEAVTSVNSRGSESHHGSCSKSHFIDSQI 31
           +G F  AV   N R S   HG     H++  ++
Sbjct: 139 LGGFGSAVQLPNGRDSVETHGRVGCPHYMAPEV 171


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 9/34 (26%), Positives = 21/34 (61%)
 Frame = +1

Query: 262 IQLSMQKTILPKEEWTKYEEDSLYLTPIVEQVEK 363
           ++ S +K+   ++ W K+E+D   L   +E+++K
Sbjct: 796 LKRSKKKSEESRKNWKKHEQDFETLKLEIEELQK 829


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 424,013
Number of Sequences: 2352
Number of extensions: 7491
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)