Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0304
(678 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.43
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.43
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 25 0.57
AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine 3-mon... 25 0.57
AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine 3-mon... 25 0.57
AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine 3-mon... 25 0.57
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 24 1.3
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 24 1.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 4.0
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 7.0
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 9.3
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.43
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 368 VGTIVG-SAVFNILAVAACCGIGAGMVVPLDWWPLTRDCLAYGITVSILICIIHDEYVQW 544
+GT++G +F +L A G LD W L I V IL+C +Q
Sbjct: 891 IGTVIGPGTIFLMLVGAFVAAFG------LDQWSSFYWNLL-PIAVFILVCATCSSDIQL 943
Query: 545 YEAFLLVSLYGVYICIMYYDKPIQ 616
+ A L+ ++YG+ + ++ +Q
Sbjct: 944 FFAGLISAIYGLIMMAVFVGVMLQ 967
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 25.4 bits (53), Expect = 0.43
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 368 VGTIVG-SAVFNILAVAACCGIGAGMVVPLDWWPLTRDCLAYGITVSILICIIHDEYVQW 544
+GT++G +F +L A G LD W L I V IL+C +Q
Sbjct: 891 IGTVIGPGTIFLMLVGAFVAAFG------LDQWSSFYWNLL-PIAVFILVCATCSSDIQL 943
Query: 545 YEAFLLVSLYGVYICIMYYDKPIQ 616
+ A L+ ++YG+ + ++ +Q
Sbjct: 944 FFAGLISAIYGLIMMAVFVGVMLQ 967
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 25.0 bits (52), Expect = 0.57
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 329 NVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGM 442
+ + F+T GD+ + G VF L + A + AGM
Sbjct: 372 HAVACFLTRGDLWLSWEEGMKVFEELLLDADWSVNAGM 409
>AY052624-1|AAL15472.1| 212|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 212
Score = 25.0 bits (52), Expect = 0.57
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 447 FLWTGGLLLEIVWLMGLQ 500
FLWTGGL+ ++ GL+
Sbjct: 191 FLWTGGLVTSALFAYGLR 208
>AY052393-1|AAL15467.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.57
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 447 FLWTGGLLLEIVWLMGLQ 500
FLWTGGL+ ++ GL+
Sbjct: 424 FLWTGGLVTSALFAYGLR 441
>AY052391-1|AAL15465.1| 445|Tribolium castaneum kynurenine
3-monooxygenase protein.
Length = 445
Score = 25.0 bits (52), Expect = 0.57
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 447 FLWTGGLLLEIVWLMGLQ 500
FLWTGGL+ ++ GL+
Sbjct: 424 FLWTGGLVTSALFAYGLR 441
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 458 WWPLTRDCLAYGITVSIL 511
WWPLTR+ L I + L
Sbjct: 51 WWPLTRNALLVLILLGAL 68
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 23.8 bits (49), Expect = 1.3
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 458 WWPLTRDCLAYGITVSIL 511
WWPLTR+ L I + L
Sbjct: 51 WWPLTRNALLVLILLGAL 68
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2
Query: 383 PLWSPLRYHPP 351
P W P +HPP
Sbjct: 1367 PEWQPTEWHPP 1377
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.4 bits (43), Expect = 7.0
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2
Query: 446 QPFPHQYHNKPPQ 408
QP+P Q + PPQ
Sbjct: 43 QPYPRQKKSHPPQ 55
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 170 ALISIYLFLALAVVCDK 220
A + I LALA +CDK
Sbjct: 274 AFLQILEILALAYLCDK 290
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,604
Number of Sequences: 336
Number of extensions: 3721
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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