Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0304
(678 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical pr... 147 5e-36
AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans Na/Ca,K-excha... 147 5e-36
Z71185-14|CAA94912.1| 591|Caenorhabditis elegans Hypothetical p... 142 2e-34
AL021475-4|CAA16315.1| 591|Caenorhabditis elegans Hypothetical ... 142 2e-34
AF016420-4|AAB65308.1| 703|Caenorhabditis elegans Na/ca exchang... 48 8e-06
Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 44 1e-04
Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchanger... 36 0.020
U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchanger... 36 0.020
U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchanger... 36 0.020
AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calciu... 36 0.020
X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium ... 36 0.035
AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical... 36 0.035
AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical... 36 0.035
U97000-9|AAC47998.1| 345|Caenorhabditis elegans Seven tm recept... 29 4.0
U39851-15|AAF99876.1| 145|Caenorhabditis elegans Hypothetical p... 29 4.0
Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical pr... 28 7.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 9.3
>Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical
protein F35C12.2a protein.
Length = 596
Score = 147 bits (357), Expect = 5e-36
Identities = 71/187 (37%), Positives = 112/187 (59%), Gaps = 5/187 (2%)
Frame = +2
Query: 83 RNCTPPAID-----DFPAGLFTELQRQHGAIVLHALISIYLFLALAVVCDKYFVPAVEKI 247
R+ PPA D FP F+ QRQ+G +VLH IY+F++LA+VCD++FVP+++ +
Sbjct: 72 RSLAPPAPDVNDDGQFPPDPFSLEQRQNGFVVLHMCGLIYMFVSLAIVCDEFFVPSLDVL 131
Query: 248 CHALNMTNDVXXXXXXXXXXXXPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCG 427
L++++DV PE F +VIG FI + ++G+GTIVGSA FNIL V A C
Sbjct: 132 TEKLSLSDDVAGATFMAAGGSAPEFFTSVIGVFIAQNNVGIGTIVGSATFNILCVLAFCT 191
Query: 428 IGAGMVVPLDWWPLTRDCLAYGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYYDK 607
+ + ++ L WWPL RD Y + +++L+ DE + + EA + S+Y VY +M ++
Sbjct: 192 LFSKSILDLTWWPLFRDVSIYMLALAMLVFFFMDEMITFPEALAMFSIYIVYCTVMKFNG 251
Query: 608 PIQNFAK 628
++ K
Sbjct: 252 QLEQLVK 258
>AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans
Na/Ca,K-exchanger protein.
Length = 596
Score = 147 bits (357), Expect = 5e-36
Identities = 71/187 (37%), Positives = 112/187 (59%), Gaps = 5/187 (2%)
Frame = +2
Query: 83 RNCTPPAID-----DFPAGLFTELQRQHGAIVLHALISIYLFLALAVVCDKYFVPAVEKI 247
R+ PPA D FP F+ QRQ+G +VLH IY+F++LA+VCD++FVP+++ +
Sbjct: 72 RSLAPPAPDVNDDGQFPPDPFSLEQRQNGFVVLHMCGLIYMFVSLAIVCDEFFVPSLDVL 131
Query: 248 CHALNMTNDVXXXXXXXXXXXXPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCG 427
L++++DV PE F +VIG FI + ++G+GTIVGSA FNIL V A C
Sbjct: 132 TEKLSLSDDVAGATFMAAGGSAPEFFTSVIGVFIAQNNVGIGTIVGSATFNILCVLAFCT 191
Query: 428 IGAGMVVPLDWWPLTRDCLAYGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYYDK 607
+ + ++ L WWPL RD Y + +++L+ DE + + EA + S+Y VY +M ++
Sbjct: 192 LFSKSILDLTWWPLFRDVSIYMLALAMLVFFFMDEMITFPEALAMFSIYIVYCTVMKFNG 251
Query: 608 PIQNFAK 628
++ K
Sbjct: 252 QLEQLVK 258
>Z71185-14|CAA94912.1| 591|Caenorhabditis elegans Hypothetical
protein Y32F6B.2 protein.
Length = 591
Score = 142 bits (344), Expect = 2e-34
Identities = 64/164 (39%), Positives = 101/164 (61%)
Frame = +2
Query: 113 FPAGLFTELQRQHGAIVLHALISIYLFLALAVVCDKYFVPAVEKICHALNMTNDVXXXXX 292
FPA +F+ R+ G +++H + IY+F+ALAVVCD++FVP++ I L +++DV
Sbjct: 19 FPADIFSLQTRRRGGVIVHIGLLIYMFVALAVVCDEFFVPSLSVITEVLAISDDVAGATF 78
Query: 293 XXXXXXXPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMVVPLDWWPLT 472
PE F ++ G F+ + ++GVGTIVGSA FNIL V A C + + V+ L WWPL
Sbjct: 79 MAAGGSAPEFFTSLFGVFVAQDNVGVGTIVGSATFNILCVLAFCTLFSRQVLHLTWWPLF 138
Query: 473 RDCLAYGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYYD 604
RD Y +++ +L+ DE ++W EA ++ S+Y Y M ++
Sbjct: 139 RDMSFYTLSLFLLLIFFGDEVIEWQEALVMFSMYIAYGFFMKFN 182
>AL021475-4|CAA16315.1| 591|Caenorhabditis elegans Hypothetical
protein Y32F6B.2 protein.
Length = 591
Score = 142 bits (344), Expect = 2e-34
Identities = 64/164 (39%), Positives = 101/164 (61%)
Frame = +2
Query: 113 FPAGLFTELQRQHGAIVLHALISIYLFLALAVVCDKYFVPAVEKICHALNMTNDVXXXXX 292
FPA +F+ R+ G +++H + IY+F+ALAVVCD++FVP++ I L +++DV
Sbjct: 19 FPADIFSLQTRRRGGVIVHIGLLIYMFVALAVVCDEFFVPSLSVITEVLAISDDVAGATF 78
Query: 293 XXXXXXXPELFVNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMVVPLDWWPLT 472
PE F ++ G F+ + ++GVGTIVGSA FNIL V A C + + V+ L WWPL
Sbjct: 79 MAAGGSAPEFFTSLFGVFVAQDNVGVGTIVGSATFNILCVLAFCTLFSRQVLHLTWWPLF 138
Query: 473 RDCLAYGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYYD 604
RD Y +++ +L+ DE ++W EA ++ S+Y Y M ++
Sbjct: 139 RDMSFYTLSLFLLLIFFGDEVIEWQEALVMFSMYIAYGFFMKFN 182
>AF016420-4|AAB65308.1| 703|Caenorhabditis elegans Na/ca exchangers
protein 8 protein.
Length = 703
Score = 47.6 bits (108), Expect = 8e-06
Identities = 31/147 (21%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Frame = +2
Query: 158 IVLHALISIYLFLALAVVCDKYFVPAVEKICHALNMTNDVXXXXXXXXXXXXPELF---V 328
I++ + I+LF+ ++ + D +F P++ I L M+ + P++F
Sbjct: 105 IIVGIIYLIFLFVVMSTIADDFFCPSISGIVTHLKMSESIAGVTFLAFGNGAPDVFGSIS 164
Query: 329 NVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMVVPLDWWPLTRDCLAYGITVS- 505
+V+ T + + +G + G+++F V A V + P RD + Y IT++
Sbjct: 165 SVLSTPKPKAALALGDLFGTSIFVTTVVLAIIIFTKSFKVAI--IPTLRDLIFYMITLAF 222
Query: 506 ILICIIHDEYVQWYEAFLLVSLYGVYI 586
I C + + ++ + + +Y VY+
Sbjct: 223 ITFCFLKFDKIEVWMPATFLGIYAVYL 249
>Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 326 VNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAG-MVVPLDWWPLTRDCLAYG--- 493
+ ++G GD+G GTIVGSA FN+ ++A C G ++ + + +G
Sbjct: 112 IEIVGNGFKAGDLGPGTIVGSAAFNLFCISAICVFAVGTQTKRIELYRVFVVTAFFGTFA 171
Query: 494 -ITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMY 598
I V +++ +I V +EA L + + + + + Y
Sbjct: 172 YIWVFLVLIVITPNVVDVWEAILTLLFFIILVVVSY 207
>Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 44.0 bits (99), Expect = 1e-04
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +2
Query: 326 VNVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAG-MVVPLDWWPLTRDCLAYG--- 493
+ ++G GD+G GTIVGSA FN+ ++A C G ++ + + +G
Sbjct: 112 IEIVGNGFKAGDLGPGTIVGSAAFNLFCISAICVFAVGTQTKRIELYRVFVVTAFFGTFA 171
Query: 494 -ITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMY 598
I V +++ +I V +EA L + + + + + Y
Sbjct: 172 YIWVFLVLIVITPNVVDVWEAILTLLFFIILVVVSY 207
>Z29094-2|CAA82339.3| 590|Caenorhabditis elegans Hypothetical
protein C07A9.4 protein.
Length = 590
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/158 (17%), Positives = 68/158 (43%), Gaps = 4/158 (2%)
Frame = +2
Query: 158 IVLHALISIYLFLALAVVCDKYFVPAVEKICHALNMTNDVXXXXXXXXXXXXPELF---V 328
I+ + + LF+ ++ D +F P++ I L ++ V P++F
Sbjct: 100 IITGVIYMLVLFIMVSSAADDFFSPSISSIVAHLRISESVAGVTFMAFGNGAPDVFGAIA 159
Query: 329 NVIGTFITEGDIGVGTIVGSAVFNILAVAACCGIGAGMVVPLDWWPLTRDCLAYGITVSI 508
+V+ + + D+ +G + G+ +F V A + + RD Y + ++
Sbjct: 160 SVLSSPTPKADLALGELFGAGLFVTTMVLAVTIFTRPFKAEV--FSSIRDIAFYLVALAF 217
Query: 509 L-ICIIHDEYVQWYEAFLLVSLYGVYICIMYYDKPIQN 619
L C ++ ++V+ + + +Y +Y+C + + + N
Sbjct: 218 LAFCFVYYDHVEIWMPITFLGVYLIYVCTVILSQILHN 255
>U70857-3|AAN84873.1| 950|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformd protein.
Length = 950
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Frame = +2
Query: 161 VLHALISIYLFLALAVVCDKYFV----------------PAVEKICHALNMTND-VXXXX 289
VL+ + Y+FL +++V D++ P ++ + + + ND V
Sbjct: 60 VLYFFVIAYMFLGISIVADRFMSSIEVITSMERTIVVKRPGLDPMAVQVRIWNDTVSNLT 119
Query: 290 XXXXXXXXPELFVNVIGTF---ITEGDIGVGTIVGSAVFNILAVAACC 424
PE+ +++I GD+G TIVGSA FN+ + A C
Sbjct: 120 LMALGSSAPEILLSIIEVIARGFEAGDLGPNTIVGSAAFNLFMIIAIC 167
>U70857-2|AAM29660.1| 975|Caenorhabditis elegans Na/ca exchangers
protein 2, isoforma protein.
Length = 975
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Frame = +2
Query: 161 VLHALISIYLFLALAVVCDKYFV----------------PAVEKICHALNMTND-VXXXX 289
VL+ + Y+FL +++V D++ P ++ + + + ND V
Sbjct: 60 VLYFFVIAYMFLGISIVADRFMSSIEVITSMERTIVVKRPGLDPMAVQVRIWNDTVSNLT 119
Query: 290 XXXXXXXXPELFVNVIGTF---ITEGDIGVGTIVGSAVFNILAVAACC 424
PE+ +++I GD+G TIVGSA FN+ + A C
Sbjct: 120 LMALGSSAPEILLSIIEVIARGFEAGDLGPNTIVGSAAFNLFMIIAIC 167
>U70857-1|AAM29661.1| 925|Caenorhabditis elegans Na/ca exchangers
protein 2, isoformb protein.
Length = 925
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Frame = +2
Query: 161 VLHALISIYLFLALAVVCDKYFV----------------PAVEKICHALNMTND-VXXXX 289
VL+ + Y+FL +++V D++ P ++ + + + ND V
Sbjct: 60 VLYFFVIAYMFLGISIVADRFMSSIEVITSMERTIVVKRPGLDPMAVQVRIWNDTVSNLT 119
Query: 290 XXXXXXXXPELFVNVIGTF---ITEGDIGVGTIVGSAVFNILAVAACC 424
PE+ +++I GD+G TIVGSA FN+ + A C
Sbjct: 120 LMALGSSAPEILLSIIEVIARGFEAGDLGPNTIVGSAAFNLFMIIAIC 167
>AJ001181-1|CAA04574.1| 925|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 925
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 20/108 (18%)
Frame = +2
Query: 161 VLHALISIYLFLALAVVCDKYFV----------------PAVEKICHALNMTND-VXXXX 289
VL+ + Y+FL +++V D++ P ++ + + + ND V
Sbjct: 60 VLYFFVIAYMFLGISIVADRFMSSIEVITSMERTIVVKRPGLDPMAVQVRIWNDTVSNLT 119
Query: 290 XXXXXXXXPELFVNVIGTF---ITEGDIGVGTIVGSAVFNILAVAACC 424
PE+ +++I GD+G TIVGSA FN+ + A C
Sbjct: 120 LMALGSSAPEILLSIIEVIARGFEAGDLGPNTIVGSAAFNLFMIIAIC 167
>X91803-1|CAA62913.1| 880|Caenorhabditis elegans sodium-calcium
exchanger protein.
Length = 880
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 314 PELFVNVI---GTFITEGDIGVGTIVGSAVFNILAVAACC 424
PE+ ++VI G G++G TIVGSA FN+ + A C
Sbjct: 143 PEILLSVIEICGNNFEAGELGPSTIVGSAAFNLFIIIAVC 182
>AL132858-14|CAJ90511.1| 873|Caenorhabditis elegans Hypothetical
protein Y113G7A.4b protein.
Length = 873
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 314 PELFVNVI---GTFITEGDIGVGTIVGSAVFNILAVAACC 424
PE+ ++VI G G++G TIVGSA FN+ + A C
Sbjct: 143 PEILLSVIEICGNNFEAGELGPSTIVGSAAFNLFIIIAVC 182
>AL132858-13|CAB60477.1| 880|Caenorhabditis elegans Hypothetical
protein Y113G7A.4a protein.
Length = 880
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Frame = +2
Query: 314 PELFVNVI---GTFITEGDIGVGTIVGSAVFNILAVAACC 424
PE+ ++VI G G++G TIVGSA FN+ + A C
Sbjct: 143 PEILLSVIEICGNNFEAGELGPSTIVGSAAFNLFIIIAVC 182
>U97000-9|AAC47998.1| 345|Caenorhabditis elegans Seven tm receptor
protein 135 protein.
Length = 345
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/59 (25%), Positives = 23/59 (38%)
Frame = +2
Query: 479 CLAYGITVSILICIIHDEYVQWYEAFLLVSLYGVYICIMYYDKPIQNFAKGSWEMGIKH 655
C+ G S+L C Y+ LV L G+ +C+++ F W G H
Sbjct: 100 CVLSGFVASLLACQFIFRYLAVCRTHFLVHLQGINLCLLFIP---SIFVFAVWHFGFFH 155
>U39851-15|AAF99876.1| 145|Caenorhabditis elegans Hypothetical
protein C23G10.10 protein.
Length = 145
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +2
Query: 521 IHDEYVQWYEAFLLVSLYGVYICIMYYDKPIQNFAKGSWEMGIKHVQR 664
+ D+ + W+EAF+ +++ + Y +Q K + E G ++ +R
Sbjct: 70 VRDKLIHWHEAFITFAMFSIAQAEARYFDAVQVLEKTNAEYGSRYPKR 117
>Z74475-3|CAA98957.2| 567|Caenorhabditis elegans Hypothetical
protein R04F11.4 protein.
Length = 567
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +2
Query: 428 IGAGMVVP--LDWWPLTRDCLAYGITVSIL-ICIIHDEYVQ 541
IG G +VP +DW P T + +G+ ++ + I ++ EY++
Sbjct: 380 IGFGDIVPANVDWLPATLAYIVFGLIITTMCIDLVGSEYIR 420
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -2
Query: 458 SPKEQPFPHQYHNKPPQLIY*RQPNPLWSPLRYHPP 351
+P P P+ H P Y +QP P P Y PP
Sbjct: 109 APAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPP 144
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,149,394
Number of Sequences: 27780
Number of extensions: 341548
Number of successful extensions: 950
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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