Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0301
(562 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021... 97 8e-21
06_01_0671 - 4899611-4899829,4900870-4901448 62 3e-10
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957... 58 6e-09
07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080 56 1e-08
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700... 38 2e-07
02_01_0691 - 5167260-5167937 41 6e-04
01_03_0105 + 12604125-12604583 33 0.12
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 31 0.63
03_03_0101 - 14431327-14432390,14432599-14432731 31 0.63
06_01_0182 + 1413551-1413794,1413883-1414139,1414241-1414387,141... 31 0.83
09_02_0453 - 9502060-9502773,9502795-9503367 30 1.1
05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524 30 1.5
01_06_0448 + 29462920-29463052,29463220-29463349,29463608-294637... 30 1.5
01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820 30 1.5
01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496 30 1.5
07_03_0575 - 19637277-19637681 29 1.9
02_03_0131 - 15576422-15577021 29 1.9
01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710 29 1.9
03_05_0214 + 22040356-22040886 29 2.5
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 29 3.4
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 29 3.4
03_05_0276 + 22646416-22646760,22646858-22647090,22647184-226472... 29 3.4
03_02_0602 + 9759055-9759223,9759305-9759455,9759548-9759593,975... 29 3.4
07_03_1139 + 24254662-24255306 28 4.4
02_03_0183 + 16106205-16106474 28 4.4
02_02_0154 + 7263707-7263782,7263908-7264248 28 4.4
06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764 28 5.9
12_01_0357 + 2720860-2721066,2721169-2721384,2721481-2723608,272... 27 7.7
10_07_0187 - 13919143-13919901 27 7.7
09_02_0245 - 6198271-6198437,6198496-6198559,6199011-6199259,619... 27 7.7
07_03_1461 - 26700613-26700621,26700784-26700851,26701778-267019... 27 7.7
07_01_0478 - 3605306-3605614,3605766-3605906 27 7.7
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 27 7.7
01_07_0192 - 41888998-41890632 27 7.7
01_01_1145 + 9073973-9074281,9075440-9075998,9076088-9076241,907... 27 7.7
>02_04_0116 +
19901546-19901737,19901825-19901899,19902034-19902115,
19902219-19902298,19903279-19903482,19903625-19903750,
19903872-19903985,19904802-19904918
Length = 329
Score = 97.1 bits (231), Expect = 8e-21
Identities = 53/100 (53%), Positives = 66/100 (66%), Gaps = 1/100 (1%)
Frame = +2
Query: 41 SKASHSPVLSVFVYYSKVFSFNKMPLQMTKPAPQFKATAVVNGEFKDISLSDYKGK-YVV 217
+ +S S S FV ++ + PL K AP F A AV + EF ++ LSDY GK YV+
Sbjct: 46 ASSSRSARASSFV--ARAGGVDDAPLVGNK-APDFDAEAVFDQEFINVKLSDYIGKKYVI 102
Query: 218 LFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDS 337
LFFYPLDFTFVCPTEI AFS++ DEF K+ E+LG S DS
Sbjct: 103 LFFYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVSIDS 142
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +2
Query: 341 FTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQ 520
F+HLAW+ T RK GGLG + PLISD + IS+ +GVL + GI RGLFIID + ++
Sbjct: 212 FSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQGIALRGLFIIDKEGVIQH 271
Query: 521 ITINDLPVG 547
TIN+L +G
Sbjct: 272 STINNLAIG 280
>06_01_0671 - 4899611-4899829,4900870-4901448
Length = 265
Score = 62.1 bits (144), Expect = 3e-10
Identities = 39/119 (32%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = +2
Query: 182 ISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAWI 361
+SLS +KG+ VV++FYP D T C + AF + ++F+K G EV+G S D +H +
Sbjct: 137 VSLSKFKGRPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDAASHKEF- 195
Query: 362 NTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETG-IPFRGLFIIDDKQNLRQITIND 535
+K+ L P L+SD+ +++ +++GV + G +P R +++ DK + Q N+
Sbjct: 196 ---KKKYKL-PFT--LLSDEGNKVRKEWGVPADLFGTLPGRQTYVL-DKNGVVQYIYNN 247
>07_03_1427 +
26495072-26495148,26495323-26495468,26495581-26495729,
26495829-26496224
Length = 255
Score = 57.6 bits (133), Expect = 6e-09
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Frame = +2
Query: 182 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 358
I + D+ G YV+LF +P DFT VC TE+ A + A EF K G ++LG S D +H W
Sbjct: 57 IRIHDFVGDTYVILFSHPGDFTPVCTTELAAMAGYAKEFDKRGVKLLGISCDDVQSHKDW 116
Query: 359 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEE 463
I + P+++D S + ++D +
Sbjct: 117 IKDIEAYKPGNRVTYPIMADPSREAIKQLNMVDPD 151
>07_03_1428 + 26498201-26498318,26498422-26498570,26498685-26499080
Length = 220
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 182 ISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHLAW 358
I L D+ G YV++F +P DFT VC TE+ + A EF K G ++LG S D +H W
Sbjct: 22 IRLHDFVGDAYVIIFSHPADFTPVCTTELSEMAGYAGEFDKRGVKLLGFSCDDVESHKDW 81
Query: 359 INTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEE 463
I + P+++D R ++D +
Sbjct: 82 IKDIEAYKPGRRVGFPIVADPDREAIRQLNMIDAD 116
>04_03_0889 +
20568984-20569037,20569271-20569345,20569981-20570088,
20572066-20572179,20572393-20572509
Length = 155
Score = 38.3 bits (85), Expect(2) = 2e-07
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 245 FVCPTEIIAFSEKADEFRKIGCEVLGASTDS 337
FV EI AFS++ +EF KI EVLG S DS
Sbjct: 48 FVSSAEITAFSDRYEEFEKINTEVLGVSIDS 78
Score = 34.3 bits (75), Expect(2) = 2e-07
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +2
Query: 446 GVLDEETGIPFRGLFIIDDKQNLRQITINDLPVG 547
GV + GI RGLFIID + ++ TIN+L +G
Sbjct: 73 GVSIDSVGIALRGLFIIDKEGVIQHSTINNLAIG 106
>02_01_0691 - 5167260-5167937
Length = 225
Score = 41.1 bits (92), Expect = 6e-04
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Frame = +2
Query: 164 NGEFKDISLSDYK-GKYVVLFFYPLDFTFVCPTEII-AFSEKADEFRKIGCEVLGA-STD 334
+GE K +++++ G+ VLF P FT C + + F EKA E G + + S +
Sbjct: 81 DGELKTVTVAELTAGRKAVLFAVPGAFTPTCSQKHLPGFIEKAGELHAKGVDAIACVSVN 140
Query: 335 SHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGV 451
F AW ++ GLG ++ L+SD + ++R GV
Sbjct: 141 DAFVMRAW----KESLGLGDADVLLLSDGNLELTRALGV 175
>01_03_0105 + 12604125-12604583
Length = 152
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 391 SHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPA 540
SH+H Q +P ++LR GR DG H RRQ Q + +PA
Sbjct: 62 SHQHKLFYSQPSPPRAKLRLVGRIDGRKEEAAHHSRRQPSLQKEAAAKPA 111
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 479 GRGCPSPRPALRSRERCGATCRL 411
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>03_03_0101 - 14431327-14432390,14432599-14432731
Length = 398
Score = 31.1 bits (67), Expect = 0.63
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 479 GRGCPSPRPALRSRERCGATCRL 411
G GC S P L ERCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLERCGKSCRL 55
>06_01_0182 +
1413551-1413794,1413883-1414139,1414241-1414387,
1414487-1414804
Length = 321
Score = 30.7 bits (66), Expect = 0.83
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = +1
Query: 457 RGDGHPLPRTLHHR---RQAEPQA-DHHQRPARGGGRW 558
R G L HH RQ + QA HHQ+PA G RW
Sbjct: 239 RKSGEKLTSKQHHHPPARQQQQQAHQHHQQPAAGQTRW 276
>09_02_0453 - 9502060-9502773,9502795-9503367
Length = 428
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 445 RSAGRGDGHPLPRTLHHRRQAEPQADHHQRPARGGG 552
R G G G P HRR P H+ P RG G
Sbjct: 50 RIIGAGGGSPCRAVEFHRRGRNPIVGHYYYPGRGSG 85
>05_01_0288 + 2253005-2253137,2253269-2253398,2253504-2254524
Length = 427
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 479 GRGCPSPRPALRSRERCGATCRL 411
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPKLAGLQRCGKSCRL 55
>01_06_0448 +
29462920-29463052,29463220-29463349,29463608-29463732,
29463923-29464458
Length = 307
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 479 GRGCPSPRPALRSRERCGATCRL 411
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSSVPRLAGLQRCGKSCRL 55
>01_05_0267 - 20237001-20237802,20238257-20238386,20238679-20238820
Length = 357
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -3
Query: 479 GRGCPSPRPALRSRERCGATCRL 411
G GC S P L ERCG +CRL
Sbjct: 36 GVGCWSSVPKLAGLERCGKSCRL 58
>01_02_0017 - 10215995-10217018,10217120-10217249,10217364-10217496
Length = 428
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 479 GRGCPSPRPALRSRERCGATCRL 411
G GC S P L +RCG +CRL
Sbjct: 33 GHGCWSTVPKLAGLQRCGKSCRL 55
>07_03_0575 - 19637277-19637681
Length = 134
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -2
Query: 420 LSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQPILRNSSAFSENAMISVGHT 247
+ + G P C R V + K ESV A + +L N F NA VG T
Sbjct: 49 IKFLSNKLSGHEPTCKRIVAVGTGSSKSESVVAVDKVESMLCNLDRFEANAQHEVGPT 106
>02_03_0131 - 15576422-15577021
Length = 199
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 367 AAQAGRTRSHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRPARG 546
A ++ R SH HS R +P R R DG P H+ +P+A + A G
Sbjct: 70 ADRSHRRHSHSHSHRGRS-SPSPDAGRHKRRRDGSPAAAATDHKDDKKPEAPVVPKSAAG 128
Query: 547 GG 552
G
Sbjct: 129 DG 130
>01_01_0288 - 2373764-2373923,2374016-2374398,2375426-2375710
Length = 275
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 371 RKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 529
+K+ G G N+P D R ++DY +DE+ +P F I D++ + + +
Sbjct: 65 KKKKGSGAGNLPGAIDAEIREAQDYLAIDEQEPVPENFPFEILDEEGMSVVIL 117
>03_05_0214 + 22040356-22040886
Length = 176
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 5/73 (6%)
Frame = +1
Query: 358 DQHAAQAGRTRSHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRR-----QAEPQAD 522
D +Q R R + + +R SAG GDG P RR EP++
Sbjct: 65 DAGTSQRWRRRRWQQGTGRRGERVTTRAPPSAGDGDGECPPHASRRRRARRRLDREPESS 124
Query: 523 HHQRPARGGGRWR 561
HQ+ GGG R
Sbjct: 125 LHQQRFDGGGGGR 137
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 463 DGHPLPRTLHHRRQAEPQADHHQRPARGGG 552
D H R HHRR+ + D H+R RGGG
Sbjct: 15 DRHHRSRDDHHRRRHDAD-DDHRRHKRGGG 43
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 28.7 bits (61), Expect = 3.4
Identities = 19/60 (31%), Positives = 22/60 (36%), Gaps = 2/60 (3%)
Frame = +1
Query: 385 TRSHEHSSDKRQVAPHLSRLRSAGRG--DGHPLPRTLHHRRQAEPQADHHQRPARGGGRW 558
T+ H H + S GRG G + QA ADH P RG GRW
Sbjct: 120 TQQHHHRGRGQASPSSADHAASRGRGRCGGDANSSSPRVAGQASRFADHAASPGRGCGRW 179
>03_05_0276 +
22646416-22646760,22646858-22647090,22647184-22647259,
22647383-22647459,22647559-22647592,22647699-22647848,
22647935-22648069,22648156-22648227
Length = 373
Score = 28.7 bits (61), Expect = 3.4
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -1
Query: 517 PEVLLVVDDEESSEGDARLLVQHS 446
P V++VVDD+E EGD +L ++
Sbjct: 81 PAVVVVVDDDEEGEGDPQLCAPYA 104
>03_02_0602 +
9759055-9759223,9759305-9759455,9759548-9759593,
9759974-9760033,9760519-9760555,9761268-9761347,
9761413-9761516,9761613-9761673,9762962-9763019,
9763866-9763918,9764357-9765320,9766131-9766185,
9767223-9768786
Length = 1133
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 2/85 (2%)
Frame = -2
Query: 483 PRKGMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTSQ- 307
P P +ST S D + RG+ G PP L C++C SV A +
Sbjct: 369 PSAAAPTGFASTDRSGGAGRDRAFARGICFGDPPPALS----PQYCLRCLSVAAKELADG 424
Query: 306 -PILRNSSAFSENAMISVGHTNVKS 235
P R ++ +++ S T+ S
Sbjct: 425 CPAKRRAAVWTDGCFASFADTSALS 449
>07_03_1139 + 24254662-24255306
Length = 214
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Frame = +1
Query: 358 DQHAAQAGRTRSHEHSSDKRQVAPHL---------SRLRSAGRGDGHPLPRTLHHRRQAE 510
D A +T H D PHL S L +AG P P HHR ++
Sbjct: 140 DSSALCCPKTPPPAHRPDPATAVPHLPPLGRDPSPSPLPTAGENSTSPTPEREHHRGESP 199
Query: 511 PQADHHQRPARGGGR 555
A +RPA R
Sbjct: 200 ADAFLARRPALPAAR 214
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 404 PLISDKSHRISRDYGVLDEETGIP 475
PL S HR SR +G L E +G P
Sbjct: 59 PLASSHEHRFSRLHGCLPESSGFP 82
>02_02_0154 + 7263707-7263782,7263908-7264248
Length = 138
Score = 28.3 bits (60), Expect = 4.4
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 474 GMPVSSSSTP*SREMRCDLSLIRGMFMGPSPPCLRGVLIQARCVKCESVEAPSTS 310
G+ +S +T S + C LSL + PS CL+ A + C + AP S
Sbjct: 25 GVIATSKATSKSYKAACTLSLATCLPSLPSDKCLKAAFAAATSLLCLTAGAPPPS 79
>06_01_1135 - 9379361-9381018,9381356-9381665,9381811-9382764
Length = 973
Score = 27.9 bits (59), Expect = 5.9
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -1
Query: 544 HGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVARDAVRLVAYQRNVHG 392
+G+VVD L + ++DD E +L +H AR +R + R+V G
Sbjct: 848 NGRVVDAVLGALCTLMDDAVDVERGVAVLAEHD-AARHVLRALRQHRDVGG 897
>12_01_0357 +
2720860-2721066,2721169-2721384,2721481-2723608,
2723699-2724124,2724242-2724546,2724660-2724823,
2724899-2724980
Length = 1175
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 466 GHPLPRTLHHRRQAEPQADHH 528
G PL R+LH +Q P A HH
Sbjct: 481 GAPLQRSLHVSQQQMPSAQHH 501
>10_07_0187 - 13919143-13919901
Length = 252
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -1
Query: 496 DDEESSEGDARLLVQHSVVAR 434
DDEE GDA +L H +VAR
Sbjct: 188 DDEELLRGDAAMLPPHEMVAR 208
>09_02_0245 -
6198271-6198437,6198496-6198559,6199011-6199259,
6199796-6199864,6199956-6200006,6200967-6201014,
6201175-6201255,6202793-6202831,6203045-6203128,
6204524-6204728,6205041-6205143,6205224-6205353,
6206059-6206250
Length = 493
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 415 RQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQAD 522
RQ AP L+ +A G+G+P P + + PQ D
Sbjct: 48 RQSAPELTAATTATEGEGNPTPTKKNIQEIPTPQFD 83
>07_03_1461 -
26700613-26700621,26700784-26700851,26701778-26701919,
26702011-26702318,26702415-26702481,26702543-26702664,
26702763-26702815,26702924-26703006,26703092-26703160,
26703235-26703633
Length = 439
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 358 DQHAAQAGRTRSHEHSSDKRQ-VAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQR 534
+Q A + R + + + Q +A L+R + G G P PRT H+ + Q
Sbjct: 305 EQSAMRQSRPQELSNGQTREQFIAAMLARPSNPESGPGRPQPRTKQHQDASPAQGRSQPM 364
Query: 535 PA 540
P+
Sbjct: 365 PS 366
>07_01_0478 - 3605306-3605614,3605766-3605906
Length = 149
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 454 GRGDGHPLPRTLHHR 498
G DGH LPRTL HR
Sbjct: 4 GGDDGHGLPRTLSHR 18
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 490 HHRRQAEPQADHHQRPARGGGRWR 561
HH Q + HHQR R G R R
Sbjct: 141 HHHHQRQRHHHHHQRQQRRGSRTR 164
>01_07_0192 - 41888998-41890632
Length = 544
Score = 27.5 bits (58), Expect = 7.7
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +1
Query: 388 RSHEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQA 519
R HE S R P + G GDG+ R +H+ A +A
Sbjct: 351 RVHEEVSSSRHADPRRADAGEDGHGDGYDELRRMHYLHAAISEA 394
>01_01_1145 +
9073973-9074281,9075440-9075998,9076088-9076241,
9077475-9077565,9077722-9077793,9077879-9078390,
9078854-9078923,9079514-9079579,9080266-9080570,
9080872-9081006,9081141-9081204,9081429-9081574,
9081669-9081773,9082310-9082490
Length = 922
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 466 GHPLPRTLHHRRQAEPQADHHQR 534
G P+PR H+R + Q+ H QR
Sbjct: 651 GQPIPRRRHNRGNRKAQSSHKQR 673
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,333,473
Number of Sequences: 37544
Number of extensions: 300141
Number of successful extensions: 1224
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1220
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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