Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0301
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...    88   2e-19
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    27   0.56 
AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein p...    25   2.2  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   6.8  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   6.8  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   6.8  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   9.0  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score = 88.2 bits (209), Expect = 2e-19
 Identities = 44/66 (66%), Positives = 50/66 (75%)
 Frame = +2

Query: 350 LAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQITI 529
           LAWINTPRK GGLG +  PL++D + RIS DYGVL  + GI  RGLFIID    +RQITI
Sbjct: 1   LAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPD-GISLRGLFIIDPAGVVRQITI 59

Query: 530 NDLPVG 547
           NDLPVG
Sbjct: 60  NDLPVG 65


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 26.6 bits (56), Expect = 0.56
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = +1

Query: 403 SSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHHQRP 537
           S  +RQ+     + +   +G+ +  P+    R+Q +PQ    QRP
Sbjct: 429 SQRQRQLQQQQQQQQQQQQGERYVPPQLRQQRQQQQPQQQQQQRP 473


>AB090823-1|BAC57921.1|  429|Anopheles gambiae gag-like protein
           protein.
          Length = 429

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 482 LGRGCPSPRPALRSRERCGATCRLSEECS 396
           + R C SP    ++  RCGA   L+++C+
Sbjct: 373 IARECRSPVDRQKACIRCGAEGHLAKDCN 401


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/34 (29%), Positives = 14/34 (41%)
 Frame = +1

Query: 427 PHLSRLRSAGRGDGHPLPRTLHHRRQAEPQADHH 528
           PHL  ++       HP    LH++  A     HH
Sbjct: 126 PHLPHVQQHHPSVHHPAHHPLHYQPAAAAAMHHH 159


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 476 FRGLFIIDDKQNLRQITIND 535
           F  +F+I D + ++QIT+ D
Sbjct: 79  FTPMFVIRDPELIKQITVKD 98


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 482 LGRGCPSPRPALRSRERCGATCRLSEECS 396
           L R C SP    ++  RCGA    ++ C+
Sbjct: 399 LARDCQSPVDRQQACIRCGADGHYAKSCT 427


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 23/89 (25%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
 Frame = -2

Query: 501 SSMMKSPRKGMPVSSSSTP*SREMRC-DLSLIRGMFMGPSPPCLRGVLIQARCVKCESVE 325
           +S +KSP K   ++      S E R    S  R     P  P  + ++ +    K +   
Sbjct: 594 ASPLKSPSKIPGLARRPENISSESRSRSTSKQRANAKTPETPSDQPLIKEVPMNKIQVGG 653

Query: 324 APSTSQPILRNSSAFSENAMISVGHTNVK 238
           APS +  ++++     ENA    G  NVK
Sbjct: 654 APSPNLKVVKSKIGSLENASHKPGGGNVK 682


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 490 HHRRQAEPQADHHQR 534
           HH  Q +PQ  H Q+
Sbjct: 311 HHHHQHQPQQQHQQQ 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,134
Number of Sequences: 2352
Number of extensions: 10477
Number of successful extensions: 35
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)