Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0288
(622 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q11TG0 Cluster: CHU large protein; candidate polyfuncti... 35 1.4
UniRef50_Q3J1P4 Cluster: Putative uncharacterized protein; n=2; ... 34 2.4
UniRef50_A7SZ29 Cluster: Predicted protein; n=1; Nematostella ve... 34 2.4
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L... 34 3.1
UniRef50_Q9RGN5 Cluster: Mucus binding protein precursor; n=1; L... 33 4.2
UniRef50_Q4DWM8 Cluster: Putative uncharacterized protein; n=2; ... 33 5.5
UniRef50_Q21QJ8 Cluster: Type IV secretory pathway VirB4 compone... 33 7.3
>UniRef50_Q11TG0 Cluster: CHU large protein; candidate
polyfunctional acetylxylan esterase/b-
xylosidase/a-L-arabinofuranosidase, CBM9 module,
Glycoside Hydrolase Family 43 protein and Carbohydrate
Esterase Family 6 protein; n=6; Bacteroidetes|Rep: CHU
large protein; candidate polyfunctional acetylxylan
esterase/b- xylosidase/a-L-arabinofuranosidase, CBM9
module, Glycoside Hydrolase Family 43 protein and
Carbohydrate Esterase Family 6 protein - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 1585
Score = 35.1 bits (77), Expect = 1.4
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = -2
Query: 372 PIVRVGP*MGSLELFGATMTSEKPIPTHEGVVKANLGGL*LGITD 238
PIVR +G L+ FG TM S P GVV +GG + + D
Sbjct: 83 PIVRCNTGLGPLDYFGRTMVSNLPANIKVGVVPVAIGGCDIALFD 127
>UniRef50_Q3J1P4 Cluster: Putative uncharacterized protein; n=2;
Rhodobacter sphaeroides|Rep: Putative uncharacterized
protein - Rhodobacter sphaeroides (strain ATCC 17023 /
2.4.1 / NCIB 8253 / DSM158)
Length = 135
Score = 34.3 bits (75), Expect = 2.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = -1
Query: 343 VARTLWSHHDFRETDSYTRGSGQGQLGWTLVGHNRFIIAVIRNSFITPCRQS*PAL 176
VAR+ W DF + Y+ G + +GH F++A++ SF+ + PAL
Sbjct: 76 VARSAWRQWDFLDDHDYSHAGGNNEDRHEFLGHAAFLLAIV--SFVGTVYTALPAL 129
>UniRef50_A7SZ29 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 723
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 119 NVCSSAYKGNKKKLPILTS*GWLRLSARSNKAISYNGNDKS--VMPN*SPPKLALTTPSC 292
+V AY GN+ + + +S GW+R+ +S+++I+ G + + ++ + PP + P C
Sbjct: 150 DVDQDAYCGNRTRFNVTSSCGWVRIRFKSDESITGRGFNATYRIIRDRKPPVITCLGPDC 209
>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
hornworm)
Length = 248
Score = 33.9 bits (74), Expect = 3.1
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +3
Query: 87 MGDGNHSPSDGTYARLLTRAIKK 155
MGDGNHSPS YA L TRA K
Sbjct: 1 MGDGNHSPSGRPYASLPTRAKMK 23
>UniRef50_Q9RGN5 Cluster: Mucus binding protein precursor; n=1;
Lactobacillus reuteri|Rep: Mucus binding protein
precursor - Lactobacillus reuteri
Length = 3269
Score = 33.5 bits (73), Expect = 4.2
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 1472 ALTSPTIAGYAPSEAVVKRSSNSDAEQGPTLTV 1504
Score = 33.5 bits (73), Expect = 4.2
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 1840 ALTSPTIAGYAPSEAVVKRSSNSDAEQGPTLTV 1872
Score = 33.5 bits (73), Expect = 4.2
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 2208 ALTSPTIAGYAPSEAVVKRSSNSDAEQGPTLTV 2240
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 1656 ALTSPTIAGYTPSEAVVKRSSNSDAEQGPTLTV 1688
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 2024 ALTSPTIAGYTPSEAVVKRSSNSDAEQGPTLTV 2056
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 2392 ALTSPTIAGYTPSEAVVKRSSNSDAEQGPTLTV 2424
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 2576 ALTSPTIAGYTPSEAVVKRSSNSDAEQGPTLTV 2608
Score = 32.7 bits (71), Expect = 7.3
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 272 ALTTPSCVGIGFSEVMVAPKSSSDPIYGPTLTI 370
ALT+P+ G SE +V S+SD GPTLT+
Sbjct: 2760 ALTSPTIAGYTPSEAVVKRSSNSDAEQGPTLTV 2792
>UniRef50_Q4DWM8 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 2120
Score = 33.1 bits (72), Expect = 5.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 213 LFLITAMINRLCPTKVHPSWP*PLPRV*ESVSLKS 317
LFL ++ +L P +HP WP LP V +S+ S
Sbjct: 1901 LFLFRVLVTKLDPALLHPFWPVVLPTVFRVISIPS 1935
>UniRef50_Q21QJ8 Cluster: Type IV secretory pathway VirB4
components-like; n=1; Rhodoferax ferrireducens T118|Rep:
Type IV secretory pathway VirB4 components-like -
Rhodoferax ferrireducens (strain DSM 15236 / ATCC
BAA-621 / T118)
Length = 831
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -1
Query: 388 ALYINADSQSGAIDGVARTLWSHHDFRETDSYTRG 284
+L +NA Q+ + G T+WS+ D R+TD+Y RG
Sbjct: 60 SLAVNAFEQAFSGFGSGSTVWSYVDRRKTDAYPRG 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,091,423
Number of Sequences: 1657284
Number of extensions: 12310151
Number of successful extensions: 26073
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26062
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -