Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0285
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   1.9  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    22   5.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.7  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.7  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = +2

Query: 158 SSPVMTRESLIKQINTQHFCANILKINNFYYSLAERKNLSGI 283
           S+P+M    ++    +  F  N+L I N  Y+  E   + G+
Sbjct: 261 SNPIMWDRVMLLTFWSAFFIVNVLYICNQCYNTVEESRIFGL 302


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 8   LTPHIVLVFPYLIQCIE 58
           + P +VL+F Y   CIE
Sbjct: 213 MVPLVVLIFTYTSICIE 229


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +2

Query: 311 TGNIFFTKISEEMKMSLQVLRPSGEFETIKVAGLSQSTTVDNLNDI 448
           T  I   K ++     ++  RP    + IK    S   TVD  NDI
Sbjct: 153 TLKILLGKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDI 198


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +2

Query: 311 TGNIFFTKISEEMKMSLQVLRPSGEFETIKVAGLSQSTTVDNLNDI 448
           T  I   K ++     ++  RP    + IK    S   TVD  NDI
Sbjct: 153 TLKILLGKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDI 198


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +2

Query: 311 TGNIFFTKISEEMKMSLQVLRPSGEFETIKVAGLSQSTTVDNLNDI 448
           T  I   K ++     ++  RP    + IK    S   TVD  NDI
Sbjct: 473 TLKILLGKYTQLKACLMEEKRPMVSLQVIKAQIYSLRETVDVFNDI 518


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,942
Number of Sequences: 336
Number of extensions: 3615
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)