Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0285
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    25   3.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   4.2  
AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA fact...    23   9.6  

>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -1

Query: 654 PFGIGAKISCFCPSFDSL*TRFCGHVAMYIVPPSF 550
           PF +  K++C  P   S+    C  +  ++  P++
Sbjct: 6   PFSVVGKLTCLSPFLQSIKVASCCQLEAFLTLPTY 40


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -2

Query: 605 VYERDSVATSLCT*FRRHSKQPSTLRPLLKPRKAVSSR 492
           ++ RD     LC     + K     RPL+KP K + S+
Sbjct: 130 LWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLVSQ 167


>AJ404478-1|CAC16182.1|   77|Anopheles gambiae putative GATA factor
           protein.
          Length = 77

 Score = 23.0 bits (47), Expect = 9.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 682 VSSVNCQTMPVRYWREN 632
           V+  NCQT     WR N
Sbjct: 59  VTCANCQTTTTTLWRRN 75


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,573
Number of Sequences: 2352
Number of extensions: 14413
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)