Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0285
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like ...    30   2.8  
AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz prote...    30   2.8  
AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz produ...    30   2.8  
AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB...    30   2.8  
AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball p...    29   6.4  
AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA...    29   6.4  

>X73154-1|CAA51678.1| 2515|Drosophila melanogaster tenascin-like
            protein protein.
          Length = 2515

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 437  LNDIVYLATDNGVYKYKDD-GSIQLYAALREDVMYLAVSNDGGTMYIATWPQNRVHKLS 610
            LN+I Y      VY +KD  GS+ L         YL   +D G +   T P+  +H  S
Sbjct: 1652 LNEIKYGDGSTMVYAFKDMFGSLPLKVTTPRRSDYLLQYDDAGALQSLTTPRGHIHAFS 1710


>AF008228-1|AAB88281.1| 2731|Drosophila melanogaster odd Oz protein
            protein.
          Length = 2731

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 437  LNDIVYLATDNGVYKYKDD-GSIQLYAALREDVMYLAVSNDGGTMYIATWPQNRVHKLS 610
            LN+I Y      VY +KD  GS+ L         YL   +D G +   T P+  +H  S
Sbjct: 1868 LNEIKYGDGSTMVYAFKDMFGSLPLKVTTPRRSDYLLQYDDAGALQSLTTPRGHIHAFS 1926


>AF008227-1|AAC05080.1| 2731|Drosophila melanogaster odd Oz product
            protein.
          Length = 2731

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 437  LNDIVYLATDNGVYKYKDD-GSIQLYAALREDVMYLAVSNDGGTMYIATWPQNRVHKLS 610
            LN+I Y      VY +KD  GS+ L         YL   +D G +   T P+  +H  S
Sbjct: 1868 LNEIKYGDGSTMVYAFKDMFGSLPLKVTTPRRSDYLLQYDDAGALQSLTTPRGHIHAFS 1926


>AE014296-3669|AAF51824.2| 2731|Drosophila melanogaster CG5723-PB
            protein.
          Length = 2731

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +2

Query: 437  LNDIVYLATDNGVYKYKDD-GSIQLYAALREDVMYLAVSNDGGTMYIATWPQNRVHKLS 610
            LN+I Y      VY +KD  GS+ L         YL   +D G +   T P+  +H  S
Sbjct: 1868 LNEIKYGDGSTMVYAFKDMFGSLPLKVTTPRRSDYLLQYDDAGALQSLTTPRGHIHAFS 1926


>AF346730-1|AAK50884.1|  942|Drosophila melanogaster cannonball
            protein.
          Length = 942

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/89 (19%), Positives = 38/89 (42%)
 Frame = +2

Query: 185  LIKQINTQHFCANILKINNFYYSLAERKNLSGIPADISIHWKTGNIFFTKISEEMKMSLQ 364
            ++K +  + F  +  +I    YS+  R  +SG   ++ + W T N    +  +  K S+ 
Sbjct: 739  IVKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASIN 798

Query: 365  VLRPSGEFETIKVAGLSQSTTVDNLNDIV 451
             +  S +   + V G     T+ +   ++
Sbjct: 799  TMEISLDNNILVVGGQDCQLTLWDFEQVI 827


>AE014296-1810|AAF50162.1|  942|Drosophila melanogaster CG6577-PA
            protein.
          Length = 942

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 17/89 (19%), Positives = 38/89 (42%)
 Frame = +2

Query: 185  LIKQINTQHFCANILKINNFYYSLAERKNLSGIPADISIHWKTGNIFFTKISEEMKMSLQ 364
            ++K +  + F  +  +I    YS+  R  +SG   ++ + W T N    +  +  K S+ 
Sbjct: 739  IVKAVQVRIFRGHKSRITALIYSICGRYLVSGGDDNLIMIWDTANEILMQFFDHHKASIN 798

Query: 365  VLRPSGEFETIKVAGLSQSTTVDNLNDIV 451
             +  S +   + V G     T+ +   ++
Sbjct: 799  TMEISLDNNILVVGGQDCQLTLWDFEQVI 827


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,599,448
Number of Sequences: 53049
Number of extensions: 614481
Number of successful extensions: 1649
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1647
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)