Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0283
(697 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 26 0.26
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 25 0.59
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 3.2
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 22 4.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 5.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.5
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 5.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.5
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 5.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.5
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 7.3
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.3
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 9.6
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 9.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 9.6
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 26.2 bits (55), Expect = 0.26
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 478 RCTRPVVPPVS-CWTPATVSPTPCPSTRDTHSP 573
R R VVPP C P+T+ P P D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 25.0 bits (52), Expect = 0.59
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 279 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 374
+VT+W + E+I++ +L V PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.6 bits (46), Expect = 3.2
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 395 GQQREDDPDHVRNIQHARHVRRHPSRA 475
GQ DP+ V + H+ HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 248 PDPQIPHRTRNRH 286
PD +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 83 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.5
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 445 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 582
PP ++PS + + + P+S T P ++++ SP S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.3
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -2
Query: 363 RGVPRGRHAAHCRRYDAKSSP 301
RG P AA C + KS P
Sbjct: 33 RGTPLAMLAAQCNKLSNKSPP 53
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 317 MPNLLHVIPVSDDSVFD 267
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 317 MPNLLHVIPVSDDSVFD 267
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 317 MPNLLHVIPVSDDSVFD 267
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.3
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -3
Query: 317 MPNLLHVIPVSDDSVFD 267
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -3
Query: 545 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 447
HG V G+ ++ +H LD D G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 590 QTQDGVGECVSLVDGH 543
Q+ D +G C S+ D H
Sbjct: 652 QSDDNLGSCGSMGDAH 667
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 590 QTQDGVGECVSLVDGH 543
Q+ D +G C S+ D H
Sbjct: 544 QSDDNLGSCGSMGDAH 559
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,524
Number of Sequences: 336
Number of extensions: 4456
Number of successful extensions: 22
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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