Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0282
(730 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 117 2e-26
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 98 9e-21
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 81 2e-15
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 81 2e-15
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 79 6e-15
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 79 6e-15
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 79 6e-15
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 79 6e-15
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 79 6e-15
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 79 6e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 79 8e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 78 1e-14
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 78 1e-14
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 72 7e-13
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 72 7e-13
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 72 7e-13
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 72 7e-13
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 71 2e-12
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 71 2e-12
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 69 9e-12
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 66 3e-11
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 59 5e-09
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 47 2e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 46 7e-05
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 42 7e-04
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 117 bits (281), Expect = 2e-26
Identities = 57/116 (49%), Positives = 71/116 (61%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D + N +K LPV+ I+ LA I+NA + FP WK A ++ IHKPGKP+ P SY
Sbjct: 455 PGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMAAILMIHKPGKPEESPESY 514
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL S D ++ + IL D QFGFR HS V+QVHRLT+HIL
Sbjct: 515 RPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGHSTVEQVHRLTKHIL 570
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 98.3 bits (234), Expect = 9e-21
Identities = 49/116 (42%), Positives = 63/116 (54%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I N +K LP Q I+ + +FNA + FP WK + IHKPGKP+ P SY
Sbjct: 454 PGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISMIHKPGKPEREPASY 513
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL S + ++GI + QFGFR H V+Q+HR+ E IL
Sbjct: 514 RPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVEQLHRVVEQIL 569
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 80.6 bits (190), Expect = 2e-15
Identities = 45/116 (38%), Positives = 58/116 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+N++IK LP + + L I+N+ + +P WK A V I KPGK N P SY
Sbjct: 499 PGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSY 558
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 559 RPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEHGSEQQIARVTQFIL 614
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 80.6 bits (190), Expect = 2e-15
Identities = 45/116 (38%), Positives = 58/116 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+N++IK LP + + L I+N+ + +P WK A V I KPGK N P SY
Sbjct: 511 PGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSY 570
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 571 RPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 626
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 79.0 bits (186), Expect = 6e-15
Identities = 45/116 (38%), Positives = 58/116 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+N++IK LP + + L I+N+ + +P WK A V I KPGK N P SY
Sbjct: 383 PGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSY 442
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 443 RPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 498
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 79.0 bits (186), Expect = 6e-15
Identities = 45/116 (38%), Positives = 58/116 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+N++IK LP + + L I+N+ + +P WK A V I KPGK N P SY
Sbjct: 499 PGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSY 558
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 559 RPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 614
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 79.0 bits (186), Expect = 6e-15
Identities = 44/116 (37%), Positives = 54/116 (46%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D + NR I+LLP Q + L IFN+ + FP WK A +I IHK GK SY
Sbjct: 258 PGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSY 317
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL S + QFGFR H +Q+HR+ L
Sbjct: 318 RPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 373
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 79.0 bits (186), Expect = 6e-15
Identities = 45/116 (38%), Positives = 58/116 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+N++IK LP + + L I+N+ + +P WK A V I KPGK N P SY
Sbjct: 499 PGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSY 558
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 559 RPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 614
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 79.0 bits (186), Expect = 6e-15
Identities = 45/116 (38%), Positives = 58/116 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+N++IK LP + + L I+N+ + +P WK A V I KPGK N P SY
Sbjct: 461 PGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSY 520
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 521 RPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 576
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 79.0 bits (186), Expect = 6e-15
Identities = 45/116 (38%), Positives = 58/116 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+N++IK LP + + L I+N+ + +P WK A V I KPGK N P SY
Sbjct: 499 PGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSY 558
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL K + QFGFR H QQ+ R+T+ IL
Sbjct: 559 RPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEHGTEQQIARVTQFIL 614
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 78.6 bits (185), Expect = 8e-15
Identities = 44/116 (37%), Positives = 54/116 (46%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D + NR I+LLP Q + LA IFN+ + FP WK A +I IHK GK SY
Sbjct: 456 PGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSY 515
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RP SLL S + QFGFR H +Q+HR+ L
Sbjct: 516 RPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNFAL 571
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 78.2 bits (184), Expect = 1e-14
Identities = 42/115 (36%), Positives = 58/115 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+ R++ LP I+ + +FNA FP WK++ ++ I KPGK K P+SY
Sbjct: 450 PGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSY 509
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 727
RPISLL + L QFGFR H ++QV+R+T I
Sbjct: 510 RPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEI 564
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 78.2 bits (184), Expect = 1e-14
Identities = 42/115 (36%), Positives = 58/115 (50%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+ R++ LP I+ + +FNA FP WK++ ++ I KPGK K P+SY
Sbjct: 450 PGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPSSY 509
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 727
RPISLL + L QFGFR H ++QV+R+T I
Sbjct: 510 RPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFREKHGTIEQVNRITSEI 564
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 72.1 bits (169), Expect = 7e-13
Identities = 41/116 (35%), Positives = 55/116 (47%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG+D ++N+ I LP + + L I+N + FP WK A + I KPGK SY
Sbjct: 55 PGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSY 114
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 115 RPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 170
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 7e-13
Identities = 41/116 (35%), Positives = 55/116 (47%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG+D ++N+ I LP + + L I+N + FP WK A + I KPGK SY
Sbjct: 502 PGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSY 561
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 562 RPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 617
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 7e-13
Identities = 41/116 (35%), Positives = 55/116 (47%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG+D ++N+ I LP + + L I+N + FP WK A + I KPGK SY
Sbjct: 502 PGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSY 561
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 562 RPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 617
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 72.1 bits (169), Expect = 7e-13
Identities = 41/116 (35%), Positives = 55/116 (47%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG+D ++N+ I LP + + L I+N + FP WK A + I KPGK SY
Sbjct: 502 PGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSY 561
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHIL 730
RPISLL D S + QFGFR +H Q+ R+T+ IL
Sbjct: 562 RPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFIL 617
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 70.5 bits (165), Expect = 2e-12
Identities = 40/115 (34%), Positives = 54/115 (46%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG DGI N +K LP I + +I N + FP WK A ++ I KPGKP ++P SY
Sbjct: 479 PGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESY 538
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 727
RPISLL F+ L Q+GFR + + +L +I
Sbjct: 539 RPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYI 593
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 70.5 bits (165), Expect = 2e-12
Identities = 40/115 (34%), Positives = 54/115 (46%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG DGI N +K LP I + +I N + FP WK A ++ I KPGKP ++P SY
Sbjct: 427 PGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPPDNPESY 486
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 727
RPISLL F+ L Q+GFR + + +L +I
Sbjct: 487 RPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNYI 541
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 68.5 bits (160), Expect = 9e-12
Identities = 40/115 (34%), Positives = 54/115 (46%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG D I+ +I LP + + +FNA FP WK +I I KPGK +SY
Sbjct: 452 PGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVASSY 511
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 727
RPISLL + I+ QFGFR +H ++QV+R+T I
Sbjct: 512 RPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRESHGTIEQVNRITTEI 566
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 66.5 bits (155), Expect = 3e-11
Identities = 36/114 (31%), Positives = 53/114 (46%)
Frame = +2
Query: 374 GFDPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHP 553
G PG+D +S ++K L L L IFN + +P W+ A +I I KP KP +
Sbjct: 451 GKSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDI 510
Query: 554 TSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRL 715
SYRPISLL F+ ++ Q F++NHS + + R+
Sbjct: 511 NSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHSTMDALLRI 564
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 59.3 bits (137), Expect = 5e-09
Identities = 34/102 (33%), Positives = 48/102 (47%)
Frame = +2
Query: 422 LPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSYRPISLLMSXXXXX 601
LP+ ++ + +FNA FP WK++ +I I KP K K P SYRPISLL
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCLSKLF 63
Query: 602 XXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHI 727
+ + L QF F H ++QV+R+T I
Sbjct: 64 EKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEI 105
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/113 (25%), Positives = 46/113 (40%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHPTSY 562
PG DGI ++K + F + + +FP WK+ ++ + K P N P SY
Sbjct: 420 PGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGVFPKRWKKMKLVLLLKGKGPANVPRSY 479
Query: 563 RPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHSCVQQVHRLTE 721
RP+ LL S L +Q+GFR S + + +T+
Sbjct: 480 RPLCLLDIVGKLFERILYARIELITESPTGLQGQQYGFRKGKSTLDALKSVTD 532
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 45.6 bits (103), Expect = 7e-05
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +2
Query: 383 PGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHK-PGKPKNHPTS 559
PG DGI+ + K + + LAS+F+ + FPA WK V+ + K P K K P+S
Sbjct: 452 PGLDGINGTICKAVWRAIPEHLASLFSRCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSS 511
Query: 560 YRPISLL 580
YR I LL
Sbjct: 512 YRGICLL 518
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 42.3 bits (95), Expect = 7e-04
Identities = 31/106 (29%), Positives = 45/106 (42%)
Frame = +2
Query: 374 GFDPGSDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNHP 553
G PG + IS ++IK + +FN N P +K + +I I KP K
Sbjct: 447 GCAPGLNRISYQMIKNSSHTTKNRITKLFNEIF-NSHIPQAYKTSLIIPILKPNTDKTKT 505
Query: 554 TSYRPISLLMSXXXXXXXXXXXXXXDFVSSKGILIDEQFGFRTNHS 691
+SYRPISL V+ ++ D+QFGF+ S
Sbjct: 506 SSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGKS 551
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,759,778
Number of Sequences: 53049
Number of extensions: 627064
Number of successful extensions: 1615
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1603
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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