Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0277
(667 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 145 2e-35
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 142 2e-34
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 106 1e-23
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 93 1e-19
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 86 2e-17
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 85 3e-17
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 85 4e-17
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 85 4e-17
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 85 4e-17
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 85 5e-17
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 84 9e-17
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 83 1e-16
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 83 2e-16
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 81 5e-16
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 81 9e-16
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 80 2e-15
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 80 2e-15
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 79 3e-15
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 78 6e-15
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 78 6e-15
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 77 1e-14
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 77 1e-14
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 77 1e-14
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 77 1e-14
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 77 1e-14
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 75 3e-14
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 75 3e-14
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 75 3e-14
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 75 6e-14
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 74 7e-14
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 73 1e-13
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 73 1e-13
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 72 4e-13
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 71 5e-13
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 71 5e-13
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 70 1e-12
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 70 2e-12
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 69 4e-12
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 69 4e-12
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 68 5e-12
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 66 1e-11
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 66 2e-11
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 66 2e-11
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 66 2e-11
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 65 5e-11
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 64 6e-11
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 64 8e-11
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 64 1e-10
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 64 1e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 64 1e-10
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 63 2e-10
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 63 2e-10
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 63 2e-10
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 62 2e-10
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 62 4e-10
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 61 6e-10
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 61 6e-10
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 61 7e-10
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 60 1e-09
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 59 2e-09
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 59 2e-09
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 59 3e-09
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 59 3e-09
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 59 3e-09
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 57 9e-09
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 57 1e-08
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 56 3e-08
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 56 3e-08
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 55 4e-08
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 55 4e-08
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 55 4e-08
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 55 4e-08
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 55 4e-08
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 55 4e-08
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 55 5e-08
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 54 6e-08
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 54 6e-08
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 54 6e-08
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 54 9e-08
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 54 1e-07
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 54 1e-07
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 54 1e-07
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 54 1e-07
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 54 1e-07
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 53 1e-07
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 53 1e-07
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 53 2e-07
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 53 2e-07
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 53 2e-07
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 52 3e-07
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 52 3e-07
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 52 3e-07
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 52 3e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 52 5e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 52 5e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 52 5e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 52 5e-07
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 52 5e-07
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 51 6e-07
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 51 6e-07
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 51 6e-07
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 51 6e-07
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 51 6e-07
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 50 1e-06
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 50 1e-06
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 50 2e-06
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 49 2e-06
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 49 2e-06
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 49 3e-06
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 49 3e-06
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 49 3e-06
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 49 3e-06
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 48 4e-06
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 48 4e-06
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 48 6e-06
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 48 6e-06
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 48 7e-06
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 48 7e-06
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 48 7e-06
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 47 1e-05
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 47 1e-05
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 47 1e-05
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 47 1e-05
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 47 1e-05
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 47 1e-05
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 47 1e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 47 1e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 46 2e-05
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 46 2e-05
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 46 2e-05
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 46 2e-05
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 46 2e-05
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 46 2e-05
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 45 4e-05
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 45 4e-05
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 45 4e-05
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 45 4e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 45 4e-05
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 45 5e-05
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 45 5e-05
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 44 7e-05
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 44 7e-05
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 44 7e-05
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 44 7e-05
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 44 9e-05
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 44 1e-04
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 44 1e-04
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 43 2e-04
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 43 2e-04
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 43 2e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 43 2e-04
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 42 3e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 42 3e-04
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 42 3e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 42 4e-04
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 42 4e-04
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 42 4e-04
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 42 5e-04
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 42 5e-04
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 41 6e-04
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 41 6e-04
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 41 6e-04
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 41 9e-04
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 41 9e-04
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 41 9e-04
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 40 0.001
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 40 0.001
At4g21530.1 68417.m03111 transducin family protein / WD-40 repea... 40 0.001
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 40 0.001
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 40 0.001
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 40 0.002
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 40 0.002
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 39 0.003
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 39 0.003
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 39 0.003
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 39 0.003
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 39 0.003
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 38 0.005
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 38 0.006
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 38 0.006
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 38 0.006
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 38 0.006
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 38 0.008
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 38 0.008
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 38 0.008
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 38 0.008
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 38 0.008
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 38 0.008
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 37 0.010
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 37 0.010
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 37 0.010
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 37 0.010
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 37 0.010
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 37 0.014
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 37 0.014
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 36 0.018
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 36 0.024
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 36 0.024
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 36 0.024
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 36 0.024
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 36 0.024
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 36 0.024
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 36 0.024
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 36 0.024
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 36 0.029
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 36 0.032
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 35 0.042
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 35 0.042
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 35 0.042
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 35 0.042
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 35 0.042
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 35 0.056
At3g49400.1 68416.m05400 transducin family protein / WD-40 repea... 35 0.056
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 35 0.056
At3g26480.1 68416.m03301 transducin family protein / WD-40 repea... 34 0.074
At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3 ... 34 0.098
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 34 0.098
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 34 0.098
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 33 0.13
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 33 0.23
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 33 0.23
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 33 0.23
At3g08850.1 68416.m01029 transducin family protein / WD-40 repea... 32 0.30
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 27 0.31
At1g30750.1 68414.m03758 expressed protein 32 0.39
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 31 0.91
At4g16280.3 68417.m02471 flowering time control protein / FCA ga... 30 1.2
At4g16280.2 68417.m02470 flowering time control protein / FCA ga... 30 1.2
At4g16280.1 68417.m02469 flowering time control protein / FCA ga... 30 1.2
At3g50590.1 68416.m05533 transducin family protein / WD-40 repea... 30 1.2
At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 compone... 30 1.6
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 30 1.6
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 30 1.6
At4g31160.1 68417.m04423 transducin family protein / WD-40 repea... 29 2.1
At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,... 29 2.1
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 2.8
At3g26640.1 68416.m03329 transducin family protein / WD-40 repea... 29 2.8
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 29 2.8
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 29 3.7
At1g12910.1 68414.m01499 flower pigmentation protein (AN11) cont... 28 4.9
At5g51270.1 68418.m06356 protein kinase family protein contains ... 28 6.4
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 28 6.4
At3g20620.1 68416.m02609 F-box family protein-related contains w... 28 6.4
At1g65030.1 68414.m07371 transducin family protein / WD-40 repea... 27 8.5
At1g59453.1 68414.m06679 transcription factor-related weak simil... 27 8.5
At1g59077.1 68414.m06670 hypothetical protein 27 8.5
At1g58766.1 68414.m06659 hypothetical protein 27 8.5
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 27 8.5
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 145 bits (352), Expect = 2e-35
Identities = 75/149 (50%), Positives = 95/149 (63%), Gaps = 1/149 (0%)
Frame = +2
Query: 224 GPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSAD 403
G S ++ NS + N + KP LK TL GHT A+S VKFS +G LAS+S D
Sbjct: 7 GTSNGVANANSTGNAGTSGNVP-IYKPYRHLK-TLEGHTAAISCVKFSNDGNLLASASVD 64
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG-KCLKTL 580
K + +W A + GH GISD+AWSSDS SASDD TL++W+ S +CLK L
Sbjct: 65 KTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVL 124
Query: 581 KGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+GH+N+VFC NFNP SNLIVS SFDE++R
Sbjct: 125 RGHTNFVFCVNFNPPSNLIVSGSFDETIR 153
Score = 85.0 bits (201), Expect = 4e-17
Identities = 46/125 (36%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Frame = +2
Query: 296 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
A+ Y L GHT V V F+P + S S D+ I+IW GK + I H M I
Sbjct: 114 ARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPI 173
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSSSF 652
S V ++ D LIVSAS D + K+W+ G CLKTL S V F+P I+ ++
Sbjct: 174 SSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATL 233
Query: 653 DESVR 667
D +++
Sbjct: 234 DSTLK 238
Score = 70.5 bits (165), Expect = 9e-13
Identities = 50/161 (31%), Positives = 84/161 (52%), Gaps = 9/161 (5%)
Frame = +2
Query: 212 QTHGGPSASL--SGPNSLSQSAPQSNKSSV--AKPNYTLKFTLAGHTKAVSSVKFSPNGE 379
+ H P +S+ + SL SA + AK LK + + AVS KFSPNG+
Sbjct: 167 KAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGK 226
Query: 380 WLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDVAWS-SDSRLIVSASDDKTLKVWE 550
++ ++ D +K+ GKF K +GH K+ A+S ++ + IVS S+D + +W+
Sbjct: 227 FILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWD 286
Query: 551 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS--FDESVR 667
L + L+ L+GH++ V + +P N I SS D+++R
Sbjct: 287 LQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIR 327
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 142 bits (344), Expect = 2e-34
Identities = 71/125 (56%), Positives = 91/125 (72%), Gaps = 5/125 (4%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTI---SGHKMG 472
Y TL H +AVSSVKFS +G LAS+SADK I+ + + + + +GH+ G
Sbjct: 14 YVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
ISDVA+SSD+R IVSASDDKTLK+W++ +G +KTL GH+NY FC NFNPQSN+IVS SF
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 653 DESVR 667
DE+VR
Sbjct: 134 DETVR 138
Score = 96.7 bits (230), Expect = 1e-20
Identities = 51/141 (36%), Positives = 80/141 (56%)
Frame = +2
Query: 233 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLI 412
AS S ++ + +A+P +FT GH +S V FS + ++ S+S DK +
Sbjct: 40 ASASADKTIRTYTINTINDPIAEP--VQEFT--GHENGISDVAFSSDARFIVSASDDKTL 95
Query: 413 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 592
K+W G KT+ GH V ++ S +IVS S D+T+++W++++GKCLK L HS
Sbjct: 96 KLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHS 155
Query: 593 NYVFCCNFNPQSNLIVSSSFD 655
+ V +FN +LIVSSS+D
Sbjct: 156 DPVTAVDFNRDGSLIVSSSYD 176
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 3/123 (2%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH---KMGIS 478
+ +K + VS V+FSPNG+++ + D +++W KF KT +GH + IS
Sbjct: 188 HCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCIS 247
Query: 479 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
++ + IVS S+D + +WEL+S K L+ L+GH+ V +P NLI S S D+
Sbjct: 248 SAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDK 307
Query: 659 SVR 667
+VR
Sbjct: 308 TVR 310
Score = 75.4 bits (177), Expect = 3e-14
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT V F+P + S S D+ ++IW GK K + H ++ V ++ D
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSN-YVFCCNFNPQSNLIVSSSFDESVR 667
LIVS+S D ++W+ +G C+KTL N V F+P I+ + D ++R
Sbjct: 168 SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLR 223
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Frame = +2
Query: 323 TLAGHTKA---VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
T GH A +SS NG+ + S S D + +W K + + GH + +VA
Sbjct: 235 TYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACH 294
Query: 494 SDSRLIVSASDDKTLKVW 547
LI S S DKT+++W
Sbjct: 295 PTENLIASGSLDKTVRIW 312
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 106 bits (255), Expect = 1e-23
Identities = 46/117 (39%), Positives = 73/117 (62%)
Frame = +2
Query: 317 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 496
K L GH + V+ V FSP+G+W+AS+S DK +++W G+F GH + V+WS+
Sbjct: 353 KKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSA 412
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
DSRL++S S D TLK+WE+ + K + L GH++ VF +++P +VS D ++
Sbjct: 413 DSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLK 469
Score = 70.5 bits (165), Expect = 9e-13
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T+AGH +AV V FSP+G+ LAS S D +++W Y T GHK + VAWS D
Sbjct: 104 TIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDG 163
Query: 503 RLIVSASDDKTLKVWELSSGKCL-KTLKGHSNYVFCCNFNP 622
+ +VS S + W G+ L GH ++ ++ P
Sbjct: 164 KHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP 204
Score = 60.9 bits (141), Expect = 7e-10
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAW-- 490
FT GH V +V +SP+G+ L S S I W G+ E ++GHK I+ ++W
Sbjct: 145 FTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEP 204
Query: 491 ---SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
SS R V++S D ++W+++ K + L GH+ V C + +I + S D +
Sbjct: 205 VHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWG-GDGIIYTGSQDCT 263
Query: 662 VR 667
++
Sbjct: 264 IK 265
Score = 57.2 bits (132), Expect = 9e-09
Identities = 30/97 (30%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNG-----EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 490
L GH K ++ + + P +SS D +IW K +SGH + ++ V W
Sbjct: 190 LTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKW 249
Query: 491 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
D +I + S D T+K+WE + GK ++ LKGH +++
Sbjct: 250 GGDG-IIYTGSQDCTIKMWETTQGKLIRELKGHGHWI 285
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH V V +S + L S S D +KIW K ++ + GH + V WS D +
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV 459
Query: 512 VSASDDKTLKVWE 550
VS D+ LK+W+
Sbjct: 460 VSGGKDRVLKLWK 472
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/68 (35%), Positives = 40/68 (58%)
Frame = +2
Query: 446 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 625
+TI+GH + V++S D + + S S D T+++W+L + L T KGH N+V ++P
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 626 SNLIVSSS 649
+VS S
Sbjct: 163 GKHLVSGS 170
Score = 43.6 bits (98), Expect(2) = 5e-11
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 509 IVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+VS SDD T+ +WE S S + K L GH V F+P I S+SFD+SVR
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVR 385
Score = 41.1 bits (92), Expect(2) = 5e-11
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L+GHT AV+ VK+ +G + + S D IK+W GK + + GH I+ +A S++
Sbjct: 237 LSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTEYV 295
Query: 506 LIVSASD 526
L A D
Sbjct: 296 LRTGAFD 302
Score = 36.3 bits (80), Expect = 0.018
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
LK L GH V +V +SP+GE + S D+++K+W
Sbjct: 436 LKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 34.7 bits (76), Expect = 0.056
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 563 KCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+C +T+ GH+ V C +F+P + S S D +VR
Sbjct: 100 RCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVR 134
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 93.5 bits (222), Expect = 1e-19
Identities = 52/142 (36%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Frame = +2
Query: 248 PNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 427
P+S SQ + K+ + + L+GH AV ++KF+P G +AS S D+ I +W
Sbjct: 24 PHSASQGPGPNGKNRTSSLEAPIML-LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV 82
Query: 428 Y-DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV- 601
+ D K + GHK I D+ W+SD IVSAS DKT++ W++ +GK +K + HS++V
Sbjct: 83 HGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN 142
Query: 602 FCCNFNPQSNLIVSSSFDESVR 667
CC LI+S S D + +
Sbjct: 143 SCCPTRRGPPLIISGSDDGTAK 164
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG----AYDGKFEKTISGHK----MGIS 478
TL GH ++ + SP+G +L ++ D + +W A + K GH+ +
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 479 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
+WS D + + S D+ + +W+ +S + + L GH+ V C F+P +I S S D+
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 336
Query: 659 SV 664
++
Sbjct: 337 NI 338
Score = 50.8 bits (116), Expect = 8e-07
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
+++V FS + + + D +K+W G+ T+ GH+ I+ ++ S D +++
Sbjct: 183 ITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGM 242
Query: 527 DKTLKVWEL----SSGKCLKTLKGHS-NY---VFCCNFNPQSNLIVSSSFDESV 664
D L VW++ +C+K +GH N+ + C+++P + + S D V
Sbjct: 243 DNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMV 296
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
+A H+ V+S + G L S S D K+W +T K I+ V++S +
Sbjct: 134 MAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPD-KYQITAVSFSDAA 192
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
I + D +KVW+L G+ TL+GH + + + +P + ++++ D +
Sbjct: 193 DKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKL 246
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
K + +SP+G + + S+D+++ IW + + GH +++ + +I S
Sbjct: 273 KNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSC 332
Query: 521 SDDKTLKVWEL 553
S DK + + E+
Sbjct: 333 SSDKNIYLGEI 343
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 86.2 bits (204), Expect = 2e-17
Identities = 42/115 (36%), Positives = 62/115 (53%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 189 TLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 248
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
R IVS +D +KVW+L++GK L K H + +F+P L+ + S D++V+
Sbjct: 249 RWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVK 303
Score = 76.6 bits (180), Expect = 1e-14
Identities = 40/129 (31%), Positives = 62/129 (48%)
Frame = +2
Query: 281 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 460
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 135 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTG 192
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H+ V + S S D LK+W++ C+ T KGH+ V F P IV
Sbjct: 193 HRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIV 252
Query: 641 SSSFDESVR 667
S D V+
Sbjct: 253 SGGEDNVVK 261
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 231 TYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHE 290
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
L+ + S DKT+K W+L + + + + + V C FNP ++
Sbjct: 291 FLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL 336
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 335 HTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
H+ AV+ +K + L + D + +W ++ GH GI V + + L+
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + T+K+W+L K ++TL GH + NF+P S S D +++
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLK 219
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 85.4 bits (202), Expect = 3e-17
Identities = 42/112 (37%), Positives = 63/112 (56%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH S+V+F P GE+LAS S+D +KIW +T GH GIS + ++ D R +
Sbjct: 98 GHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWV 157
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
VS D +KVW+L++GK L K H + +F+P L+ + S D +V+
Sbjct: 158 VSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVK 209
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/129 (30%), Positives = 62/129 (48%)
Frame = +2
Query: 281 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 460
N ++ KP T +L GHT AV SV F + + ++ +IK+W + K + +G
Sbjct: 41 NLWAIGKP--TSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTG 98
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H+ S V + + S S D LK+W++ C++T KGHS + F P +V
Sbjct: 99 HRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVV 158
Query: 641 SSSFDESVR 667
S D V+
Sbjct: 159 SGGLDNVVK 167
Score = 64.1 bits (149), Expect = 8e-11
Identities = 28/115 (24%), Positives = 59/115 (51%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GH++ +S+++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 137 TYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLE 196
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
L+ + S D+T+K W+L + + + + + + V F+P + D+S++
Sbjct: 197 FLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF-CGLDDSLK 250
Score = 48.0 bits (109), Expect = 6e-06
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Frame = +2
Query: 293 VAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKM 469
+AK Y L+ LA H+ V+ + L + D + +W ++ GH
Sbjct: 1 MAKRGYKLQEFLA-HSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTS 59
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
+ VA+ S L+++ + +K+W++ K ++ GH + F+P + S S
Sbjct: 60 AVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGS 119
Query: 650 FDESVR 667
D +++
Sbjct: 120 SDANLK 125
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/115 (35%), Positives = 61/115 (53%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
R +VS +D +KVW+L++GK L K H + +F+P L+ + S D +V+
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Score = 76.6 bits (180), Expect = 1e-14
Identities = 39/129 (30%), Positives = 62/129 (48%)
Frame = +2
Query: 281 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 460
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 42 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG 99
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H+ V + S S D LK+W++ C+ T KGH+ V F P +V
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVV 159
Query: 641 SSSFDESVR 667
S D V+
Sbjct: 160 SGGEDNIVK 168
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/106 (27%), Positives = 55/106 (51%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
L+ + S D+T+K W+L + + + + + V C +FNP ++
Sbjct: 198 FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
K Y L+ +A H+ AV+ +K + L + D + +W ++ GH GI
Sbjct: 4 KRAYKLQEFVA-HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 62
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
V + + L+ + + T+K+W+L K ++TL GH + +F+P S S D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 656 ESVR 667
+++
Sbjct: 123 TNLK 126
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/115 (35%), Positives = 61/115 (53%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GH SV F P GE+ AS S D +KIW T GH G++ + ++ D
Sbjct: 96 TLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDG 155
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
R +VS +D +KVW+L++GK L K H + +F+P L+ + S D +V+
Sbjct: 156 RWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVK 210
Score = 76.6 bits (180), Expect = 1e-14
Identities = 39/129 (30%), Positives = 62/129 (48%)
Frame = +2
Query: 281 NKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 460
N ++ KPN L +L GH+ + SV F + +A+ +A IK+W + K +T++G
Sbjct: 42 NLWAIGKPNAIL--SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG 99
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H+ V + S S D LK+W++ C+ T KGH+ V F P +V
Sbjct: 100 HRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVV 159
Query: 641 SSSFDESVR 667
S D V+
Sbjct: 160 SGGEDNIVK 168
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/106 (27%), Positives = 55/106 (51%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GHT+ V+ ++F+P+G W+ S D ++K+W GK H+ I + +
Sbjct: 138 TYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE 197
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
L+ + S D+T+K W+L + + + + + V C +FNP ++
Sbjct: 198 FLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL 243
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
K Y L+ +A H+ AV+ +K + L + D + +W ++ GH GI
Sbjct: 4 KRAYKLQEFVA-HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 62
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
V + + L+ + + T+K+W+L K ++TL GH + +F+P S S D
Sbjct: 63 DSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLD 122
Query: 656 ESVR 667
+++
Sbjct: 123 TNLK 126
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 85.0 bits (201), Expect = 4e-17
Identities = 41/112 (36%), Positives = 63/112 (56%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH S+V+F P GE+LAS S+D +++W +T GH GIS + +S D R +
Sbjct: 47 GHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWV 106
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
VS D +KVW+L++GK L K H + +F+P L+ + S D +V+
Sbjct: 107 VSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVK 158
Score = 74.1 bits (174), Expect = 7e-14
Identities = 33/115 (28%), Positives = 56/115 (48%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
+L GHT V SV F+ + + ++ +IK+W + K + +GH+ S V +
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ S S D L+VW+ C++T KGH+ + F+P +VS D V+
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVK 116
Score = 66.9 bits (156), Expect = 1e-11
Identities = 29/105 (27%), Positives = 54/105 (51%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GHT+ +S+++FSP+G W+ S D ++K+W GK H+ I + +
Sbjct: 86 TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE 145
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 637
L+ + S D+T+K W+L + + + T + + V F+P +
Sbjct: 146 FLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTL 190
Score = 33.5 bits (73), Expect = 0.13
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H + S+ F P LA+ SAD+ +K W + T G+ +A+ D + +
Sbjct: 132 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLF 191
Query: 515 SASDDKTLKV--WE 550
DD LKV WE
Sbjct: 192 CGLDD-GLKVYSWE 204
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 84.6 bits (200), Expect = 5e-17
Identities = 39/114 (34%), Positives = 62/114 (54%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 166 LQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHT 225
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ SA DDK +K W+L K +++ GH + V+C +P +++++ D R
Sbjct: 226 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCR 279
Score = 51.2 bits (117), Expect = 6e-07
Identities = 28/118 (23%), Positives = 53/118 (44%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
LK TL GH V + S ++ S+ DK +K W K ++ GH G+ +A
Sbjct: 204 LKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
++++ D +VW++ + + L H + VF P +++ S D +++
Sbjct: 264 PTLDVVLTGGRDSVCRVWDIRTKMQIFVLP-HDSDVFSVLARPTDPQVITGSHDSTIK 320
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/108 (24%), Positives = 46/108 (42%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH V + P + + + D + ++W K + + H + V +
Sbjct: 252 GHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQV 310
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
++ S D T+K W+L GK + T+ H V +P+ N VS+S D
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASAD 358
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/74 (24%), Positives = 37/74 (50%)
Frame = +2
Query: 446 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 625
+ + GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 626 SNLIVSSSFDESVR 667
+ S+ D+ V+
Sbjct: 224 HTYMFSAGDDKQVK 237
Score = 36.7 bits (81), Expect = 0.014
Identities = 25/77 (32%), Positives = 33/77 (42%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H V SV P + + S D IK W GK TI+ HK + +A V
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 515 SASDDKTLKVWELSSGK 565
SAS D +K + L G+
Sbjct: 354 SASAD-NIKKFSLPKGE 369
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/80 (25%), Positives = 35/80 (43%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T+ H K V ++ P S+SAD IK + G+F + + I + ++
Sbjct: 332 TITNHKKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLSLQRDIINAVAVNED 390
Query: 503 RLIVSASDDKTLKVWELSSG 562
++V+ D L W+ SG
Sbjct: 391 GVMVTGGDKGGLWFWDWKSG 410
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 83.8 bits (198), Expect = 9e-17
Identities = 38/114 (33%), Positives = 62/114 (54%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
+ GH V SV F P+ EW + SAD+ IKIW G + T++GH + +A S+
Sbjct: 172 IQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHT 231
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ SA DDK +K W+L K +++ GH + V+C +P +++++ D R
Sbjct: 232 YMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCR 285
Score = 58.8 bits (136), Expect = 3e-09
Identities = 30/118 (25%), Positives = 54/118 (45%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
LK TL GH + V + S ++ S+ DK +K W K ++ GH G+ +A
Sbjct: 210 LKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALH 269
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
++++ D +VW++ + + L GH N V P +V+ S D +++
Sbjct: 270 PTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIK 327
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/110 (26%), Positives = 46/110 (41%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH V + P + L + D + ++W +SGH + V +
Sbjct: 258 GHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQV 317
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
V+ S D T+K W+L GK + TL H V +P+ N S+S D +
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNT 367
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/74 (32%), Positives = 31/74 (41%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
F L+GH V SV P + + S D IK W GK T++ HK + +
Sbjct: 296 FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPK 355
Query: 500 SRLIVSASDDKTLK 541
SAS D T K
Sbjct: 356 ENAFASASADNTKK 369
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +2
Query: 446 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 625
+ I GH + VA+ + + S D+T+K+W++++G TL GH V + +
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 626 SNLIVSSSFDESVR 667
+ S+ D+ V+
Sbjct: 230 HTYMFSAGDDKQVK 243
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 83.4 bits (197), Expect = 1e-16
Identities = 40/111 (36%), Positives = 62/111 (55%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H V V F + S D IK+W + T+ GH I V + ++ IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
SASDD+T+++W S C+ L GH++YV C +F+P+ +L+VS+S D++VR
Sbjct: 110 SASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Score = 65.7 bits (153), Expect = 3e-11
Identities = 32/107 (29%), Positives = 54/107 (50%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V + F P W+ +S +I++W G H+ + V + + L VS D
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 527 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D +KVW + +CL TL GH +Y+ F+ ++ IVS+S D+++R
Sbjct: 72 DYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIR 118
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = +2
Query: 275 QSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-- 448
Q N + +K+ L GH + V+ F P + S + D+ +K+W + K +
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
T+ GH +S V + + +IVS S+DK+++VW+ + ++T + + + +P+
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHPEI 302
Query: 629 NLIVS 643
NL+ +
Sbjct: 303 NLLAA 307
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +2
Query: 416 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGH 589
++G D + + GH G++ ++ LIVS +DD+ +K+W ++ K + TL+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 590 SNYVFCCNFNPQSNLIVSSSFDESVR 667
N V F+ + ++IVS+S D+S+R
Sbjct: 248 MNNVSSVMFHAKQDIIVSNSEDKSIR 273
Score = 57.2 bits (132), Expect = 9e-09
Identities = 26/82 (31%), Positives = 45/82 (54%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
FTL GH + +V+F W+ S+S D+ I+IW ++GH + ++
Sbjct: 87 FTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPK 146
Query: 500 SRLIVSASDDKTLKVWELSSGK 565
L+VSAS D+T++VW++ + K
Sbjct: 147 EDLVVSASLDQTVRVWDIGALK 168
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 82.6 bits (195), Expect = 2e-16
Identities = 40/111 (36%), Positives = 62/111 (55%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H V V F + S D IK+W + + T+ GH I V + + IV
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
SASDD+T+++W S C+ L GH++YV C +F+P+ +L+VS+S D++VR
Sbjct: 110 SASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/107 (29%), Positives = 53/107 (49%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V + F P W+ +S +I++W G H+ + V + + L VS D
Sbjct: 12 VKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGD 71
Query: 527 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D +KVW + +CL TL GH +Y+ F+ + IVS+S D+++R
Sbjct: 72 DYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIR 118
Score = 62.1 bits (144), Expect = 3e-10
Identities = 32/125 (25%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Frame = +2
Query: 275 QSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-- 448
Q N + +K+ L GH + V+ F P + S + D+ +K+W + K +
Sbjct: 183 QMNSDLFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVD 242
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
T+ GH +S V + + +IVS S+DK+++VW+ + L+T + + + +P+
Sbjct: 243 TLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEM 302
Query: 629 NLIVS 643
NL+ +
Sbjct: 303 NLLAA 307
Score = 59.3 bits (137), Expect = 2e-09
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +2
Query: 416 IWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC--LKTLKGH 589
++G D + + GH G++ A+ LIVS +DD+ +K+W ++ K + TL+GH
Sbjct: 188 LFGGVDAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTLRGH 247
Query: 590 SNYVFCCNFNPQSNLIVSSSFDESVR 667
N V F+ + ++IVS+S D+S+R
Sbjct: 248 MNNVSSVMFHAKQDIIVSNSEDKSIR 273
Score = 57.6 bits (133), Expect = 7e-09
Identities = 26/85 (30%), Positives = 46/85 (54%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 484
N+ FTL GH + +V+F W+ S+S D+ I+IW ++GH +
Sbjct: 82 NHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCA 141
Query: 485 AWSSDSRLIVSASDDKTLKVWELSS 559
++ L+VSAS D+T++VW++ +
Sbjct: 142 SFHPKEDLVVSASLDQTVRVWDIGA 166
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 81.4 bits (192), Expect = 5e-16
Identities = 35/114 (30%), Positives = 69/114 (60%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
+AGH +S V + PN ++A+ S+DK +++W G+ + GH+ + +A S D R
Sbjct: 498 MAGH---LSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGR 554
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ S +D T+ +W+LS+ +C+ L GH++ V+ +++ + +L+ S S D +V+
Sbjct: 555 YMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVK 608
Score = 69.3 bits (162), Expect = 2e-12
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 1/136 (0%)
Frame = +2
Query: 263 QSAPQSNKSSVAKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
Q+ S+ S+ PN +TL GH+ V S FSP G+++ SSSAD I++W
Sbjct: 393 QAENDSSDQSIG-PNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNA 451
Query: 440 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 619
GH + D +S S S D+T ++W + + L+ + GH + V +++
Sbjct: 452 NLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDV---DWH 508
Query: 620 PQSNLIVSSSFDESVR 667
P N I + S D++VR
Sbjct: 509 PNCNYIATGSSDKTVR 524
Score = 53.2 bits (122), Expect = 1e-07
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH V S+ SP+G ++AS D I +W + + GH + +++S + L+
Sbjct: 539 GHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLL 598
Query: 512 VSASDDKTLKVWEL-SSGKCLKTLKGHSN 595
S S D T+K+W++ SS K K + + N
Sbjct: 599 ASGSADCTVKLWDVTSSTKLTKAEEKNGN 627
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
L GH V S+ +S G LAS SAD +K+W
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 80.6 bits (190), Expect = 9e-16
Identities = 43/119 (36%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNR 118
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSSSFDESVR 667
IVSAS D+T+K+W + G+C T+ GH +V C F+P + + IVS+S+D++V+
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Score = 62.9 bits (146), Expect = 2e-10
Identities = 39/122 (31%), Positives = 66/122 (54%), Gaps = 5/122 (4%)
Frame = +2
Query: 317 KFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD 481
K+T++ GH + VS V+FSPN + S+S DK +K+W + K ++ GH ++
Sbjct: 139 KYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNT 198
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
VA S D L S D + +W+L+ GK L +L+ S C F+P + +++ + S
Sbjct: 199 VAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC-FSPNRYWLCAAT-ENS 256
Query: 662 VR 667
+R
Sbjct: 257 IR 258
Score = 61.7 bits (143), Expect = 4e-10
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 475
LK + HT V+++ N + + ++S DK I +W G ++ ++GH +
Sbjct: 7 LKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFV 66
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
DV SSD + +S S D L++W+L++G+ + GH+ V F+ + IVS+S D
Sbjct: 67 EDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 656 ESVR 667
+++
Sbjct: 127 RTIK 130
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/93 (29%), Positives = 48/93 (51%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 484
N L+ +L GH+ +++V SP+G AS D +I +W +GK K S I
Sbjct: 182 NCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS 239
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
S +R + A+ + ++++W+L S ++ LK
Sbjct: 240 LCFSPNRYWLCAATENSIRIWDLESKSVVEDLK 272
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/114 (30%), Positives = 62/114 (54%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH AV + +F+ +G + + D+ I++W + G KT H + DV +SD+
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
S D+ + W++S+G+ ++ +GH V FN S+++VS+ FD S+R
Sbjct: 74 KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLR 127
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/109 (20%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDVAWSSDSRLIVSA 520
V+ + S +G + + D +++ G+ + GH K +D ++ ++
Sbjct: 187 VNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGG 246
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
S+D + W+L K L + H V +++P+ + +++SS D ++R
Sbjct: 247 SEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIR 295
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T H + V V + + S D+ + W G+ + GH ++ V ++ S
Sbjct: 55 TYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSS 114
Query: 503 RLIVSASDDKTLKVWELSS 559
++VSA D++L+VW+ S
Sbjct: 115 SVVVSAGFDRSLRVWDCRS 133
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 79.8 bits (188), Expect = 2e-15
Identities = 42/119 (35%), Positives = 71/119 (59%), Gaps = 5/119 (4%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
+ GH+ V V S +G++ S S D +++W G+ + GH + VA+S+D+R
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNR 118
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLK---GHSNYVFCCNFNPQSNL--IVSSSFDESVR 667
IVSAS D+T+K+W + G+C T+ GH +V C F+P + + IVS+S+D++V+
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Score = 65.7 bits (153), Expect = 3e-11
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 5/122 (4%)
Frame = +2
Query: 317 KFTLA---GHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISD 481
K+T++ GH + VS V+FSPN + S+S DK +K+W + K T++GH ++
Sbjct: 139 KYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNT 198
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
VA S D L S D + +W+L+ GK L +L+ S C F+P + +++ + S
Sbjct: 199 VAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLC-FSPNRYWLCAAT-ENS 256
Query: 662 VR 667
+R
Sbjct: 257 IR 258
Score = 65.3 bits (152), Expect = 3e-11
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYD-----GKFEKTISGHKMGI 475
LK T+ HT V+++ N + + +SS DK I +W G ++ ++GH +
Sbjct: 7 LKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFV 66
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
DV SSD + +S S D L++W+L++G+ + GH+ V F+ + IVS+S D
Sbjct: 67 QDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRD 126
Query: 656 ESVR 667
+++
Sbjct: 127 RTIK 130
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/93 (31%), Positives = 49/93 (52%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 484
N L+ TLAGH+ +++V SP+G AS D +I +W +GK K S I
Sbjct: 182 NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGK--KLYSLEAGSIIHS 239
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
S +R + A+ + ++++W+L S ++ LK
Sbjct: 240 LCFSPNRYWLCAATENSIRIWDLESKSVVEDLK 272
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 79.0 bits (186), Expect = 3e-15
Identities = 39/117 (33%), Positives = 61/117 (52%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 484
N + +A H K ++SV + N + + S D+ IW D T+ GHK I V
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+S+ + +++AS DKT+K+W +S G CLKT +GH++ V +F VS D
Sbjct: 548 EFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGAD 604
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +2
Query: 230 SASLSGPNSLSQSAPQSNKSSVAK-PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 406
S +++ +SL + + +S+ + P+ TL GH + + SV+FS + + ++S DK
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDK 563
Query: 407 LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 586
+KIW DG KT GH + ++ +D VS D LK+W +++ +C+ T
Sbjct: 564 TVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQ 623
Query: 587 HSNYVFCCNFNPQSNLIVSSSFD 655
H + V+ ++ +I + D
Sbjct: 624 HEDKVWALAVGKKTEMIATGGGD 646
Score = 66.5 bits (155), Expect = 1e-11
Identities = 39/154 (25%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Frame = +2
Query: 212 QTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLAS 391
Q +GG +S S A + V + ++K T+ G + ++++ SP+ + L S
Sbjct: 18 QFYGGGPFIVSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFS 77
Query: 392 SSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL 571
+ + I++W K ++ GH+ + +A + L+ +A D+ + VW++ G C
Sbjct: 78 AGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCT 137
Query: 572 KTLKGHSNYVFCCNFNPQS--NLIVSSSFDESVR 667
+GH V F+P S N+++S S D +VR
Sbjct: 138 HYFRGHKGVVSSILFHPDSNKNILISGSDDATVR 171
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDG-----------KFEKTISGHKMGI 475
GH + +V F+ + S S D+ +K+W + DG K ++ H I
Sbjct: 444 GHNGDILAVAFAKKSFSFFVSGSGDRTLKVW-SLDGISEDSEEPINLKTRSVVAAHDKDI 502
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ VA + + L+ + S+D+T +W L + TLKGH +F F+ ++++S D
Sbjct: 503 NSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGD 562
Query: 656 ESVR 667
++V+
Sbjct: 563 KTVK 566
Score = 53.2 bits (122), Expect = 1e-07
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 6/117 (5%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR-- 505
GH V + +G LA++ AD+ + +W G GHK +S + + DS
Sbjct: 100 GHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKN 159
Query: 506 LIVSASDDKTLKVWELSS----GKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+++S SDD T++VW+L++ KCL ++ H + V + + S+ D+ V
Sbjct: 160 ILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVV 216
Score = 49.6 bits (113), Expect = 2e-06
Identities = 32/131 (24%), Positives = 66/131 (50%), Gaps = 5/131 (3%)
Frame = +2
Query: 290 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHK 466
+V + L L G+ + ++ +KF + E +LA ++ + ++++ ++GHK
Sbjct: 342 NVEETELVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHK 401
Query: 467 ---MGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 634
+ + SS + LIV+ S DKT+++W +S C+ GH+ + F +S +
Sbjct: 402 EVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSF 461
Query: 635 IVSSSFDESVR 667
VS S D +++
Sbjct: 462 FVSGSGDRTLK 472
Score = 40.7 bits (91), Expect = 9e-04
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GHT +V F +G S AD L+K+W + T H+ + +A +
Sbjct: 578 TFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKT 637
Query: 503 RLIVSASDDKTLKVWELSS 559
+I + D + +W S+
Sbjct: 638 EMIATGGGDAVINLWHDST 656
Score = 36.3 bits (80), Expect = 0.018
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM--GISDVAWSSDSRL 508
H AV+S+ S +G L S+ DK++ +W +D + T++ +++ ++ V+ +
Sbjct: 191 HFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFAS 250
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYV--------FCCNFNPQSNLIVSSSFDESV 664
V++ D K K E S G V C S++ VSS +ES
Sbjct: 251 FVASLDQKKSKKKESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDITVSSDDEESK 310
Query: 665 R 667
R
Sbjct: 311 R 311
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 77.8 bits (183), Expect = 6e-15
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L H + SP ++LA++S+DK +KIW K EK ++GH+ + D +S D
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 610
+V+AS D T ++W + +GK +K +GH CC
Sbjct: 267 FLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/72 (30%), Positives = 37/72 (51%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
+ H I S ++ + +AS DKT+K+W + K K L GH +V+ C F+
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 632 LIVSSSFDESVR 667
+V++S D + R
Sbjct: 267 FLVTASSDMTAR 278
Score = 39.9 bits (89), Expect = 0.001
Identities = 20/82 (24%), Positives = 36/82 (43%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T HT V +V F + +W+ S S D +KIW +K ++ V +
Sbjct: 73 TYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQ 131
Query: 503 RLIVSASDDKTLKVWELSSGKC 568
++S + ++VW+L + C
Sbjct: 132 TELISGDQNGNIRVWDLRANSC 153
Score = 38.7 bits (86), Expect = 0.003
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 463
+ L+ L GH + V FS +GE+L ++S+D ++W GK K GH
Sbjct: 243 FKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 34.3 bits (75), Expect = 0.074
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +2
Query: 491 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSS 646
S S ++ +AS D T++ WE +G+C +T++ ++V P + + ++
Sbjct: 2 SQPSVILATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKHYLAAA 53
Score = 33.9 bits (74), Expect = 0.098
Identities = 18/78 (23%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSA 520
V+ ++ +P+ +LA++ + I+++ + T H + V + D++ + S
Sbjct: 38 VNRLEITPDKHYLAAA-CNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSG 96
Query: 521 SDDKTLKVWELSSGKCLK 574
S+D T+K+W+L + C K
Sbjct: 97 SEDGTVKIWDLRAPGCQK 114
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 77.8 bits (183), Expect = 6e-15
Identities = 41/134 (30%), Positives = 76/134 (56%), Gaps = 6/134 (4%)
Frame = +2
Query: 284 KSSVAKPNYTLKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE--KTI 454
+SS+++ ++T K L HT+ V S +SP+G+ LA++S D IW Y +FE T+
Sbjct: 56 QSSLSR-SWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYGSEFECISTL 114
Query: 455 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK---CLKTLKGHSNYVFCCNFNPQ 625
GH+ + V+W++ + + S DK++ +WE+ G C L GH+ V ++P
Sbjct: 115 EGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPT 174
Query: 626 SNLIVSSSFDESVR 667
+++ S S+D +++
Sbjct: 175 MDVLFSCSYDNTIK 188
Score = 50.4 bits (115), Expect = 1e-06
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 20/140 (14%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFE------KTISGH 463
Y L GHT+ V V++ P + L S S D IK+W + DG+++ ++ +GH
Sbjct: 153 YDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGH 212
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGK------CLKTLKG-HSNYVFC 607
+ +++++ +V+ SDD TLK+W ++ SG+ L TL G H ++
Sbjct: 213 SSTVWSISFNAAGDKMVTCSDDLTLKIWGTDIAKMQSGEEYAPWIHLCTLSGYHDRTIYS 272
Query: 608 CNFNPQSNLIVSSSFDESVR 667
+++ + ++I S + D ++R
Sbjct: 273 AHWS-RDDIIASGAGDNAIR 291
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Frame = +2
Query: 323 TLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGK----FEKTISGHKMG 472
TL+G H + + S +S + + +AS + D I+++ + DG K H+
Sbjct: 261 TLSGYHDRTIYSAHWSRD-DIIASGAGDNAIRLFVDSKHDSVDGPSYNLLLKKNKAHEND 319
Query: 473 ISDVAWS--SDSRLIVSASDDKTLKVWELSS 559
++ V WS +RL+ SASDD +K+W+L++
Sbjct: 320 VNSVQWSPGEGNRLLASASDDGMVKIWQLAT 350
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 77.0 bits (181), Expect = 1e-14
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 496
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H G++ V +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHLKGVNCVDYFTGG 197
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D +++ SDD T KVW+ + C++TL+GH++ V +F+P+ +I++ S D +VR
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVR 254
Score = 59.3 bits (137), Expect = 2e-09
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V S KF +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSD 119
Query: 527 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDESVR 667
D +K+W+ G C + +GHS+YV FNP+ +N S+S D +++
Sbjct: 120 DMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V++
Sbjct: 179 FTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFH 238
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTL 580
+ +I++ S+D T+++W ++ + TL
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTL 267
Score = 48.4 bits (110), Expect = 4e-06
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-EKTISGHKMGISDVAWS-SDSRL 508
H + V P ++ SSS D LIK+W G + GH + V ++ D+
Sbjct: 98 HADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 616
SAS D+T+K+W L S TL H V C ++
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDY 193
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/118 (20%), Positives = 55/118 (46%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFI 66
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + +V+ +DD ++V+ ++ +K + H++Y+ C +P ++SSS D ++
Sbjct: 67 ARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIK 124
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT VS+V F P + + S D ++IW A + E T++ + + S
Sbjct: 224 TLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGHIKGS 283
Query: 503 RLIVSASDDKTLKV 544
R +V D+ ++ V
Sbjct: 284 RRVVIGYDEGSIMV 297
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 77.0 bits (181), Expect = 1e-14
Identities = 39/128 (30%), Positives = 69/128 (53%), Gaps = 8/128 (6%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------GH 463
+T+KF H + +FSP+G++LASSS D I++W GK +K + H
Sbjct: 206 HTIKFGKKSHAECA---RFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMH 262
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 643
+ + +S DS ++ S S D +K+W + +G C++ HS V +F+ + ++S
Sbjct: 263 DDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLS 322
Query: 644 SSFDESVR 667
+SFD++ R
Sbjct: 323 TSFDQTAR 330
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/111 (34%), Positives = 60/111 (54%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H V + FS + E LAS S D IKIW G + H G++ +++S D ++
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
S S D+T ++ L SGK LK +GH++YV F + I+++S D +V+
Sbjct: 322 STSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVK 372
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H++ V+S+ FS +G L S+S D+ +I G GK K GH ++ ++SD I+
Sbjct: 304 HSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 515 SASDDKTLKVWELSSGKCLKTLK 583
+AS D T+KVW+ + CL+T K
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFK 386
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +2
Query: 230 SASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 409
S S G LS S Q+ + K LK GHT V+ F+ +G + ++S+D
Sbjct: 312 SFSRDGSQLLSTSFDQTARIHGLKSGKLLK-EFRGHTSYVNHAIFTSDGSRIITASSDCT 370
Query: 410 IKIW 421
+K+W
Sbjct: 371 VKVW 374
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/62 (22%), Positives = 28/62 (45%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV 544
S G+W+ DK + + G E + H+ + + L+ + S+D T+K+
Sbjct: 449 STKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTMKL 508
Query: 545 WE 550
W+
Sbjct: 509 WK 510
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 77.0 bits (181), Expect = 1e-14
Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 6/120 (5%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH+ V V S +G++ S S D +++W G + GH + VA+S D+R
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNR 118
Query: 506 LIVSASDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQS--NLIVSSSFDESVR 667
IVSAS D+T+K+W + G+C T+ +GH ++V C F+P + IVS+S+D++V+
Sbjct: 119 QIVSASRDRTIKLWN-TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 177
Score = 76.2 bits (179), Expect = 2e-14
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS----GHKMGISDVAWSSD 499
GHTK V SV FS + + S+S D+ IK+W G+ + TIS GH+ +S V +S +
Sbjct: 103 GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPN 161
Query: 500 SR--LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ IVSAS DKT+KVW LS+ K TL GH+ YV +P +L S D
Sbjct: 162 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 215
Score = 67.7 bits (158), Expect = 6e-12
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Frame = +2
Query: 236 SLSGPNSLSQSAPQSNK--SSVAKPNYTLKFTLAGHTKAVSSVKFSPNG--EWLASSSAD 403
SL +S S ++ K +++ + YT+ GH VS V+FSPN + S+S D
Sbjct: 114 SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 173
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
K +K+W + K T++GH +S VA S D L S D + +W+L+ GK L +L+
Sbjct: 174 KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE 233
Query: 584 GHSNYVFCCNFNP 622
+S C F+P
Sbjct: 234 ANSVIHALC-FSP 245
Score = 64.1 bits (149), Expect = 8e-11
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWG------AYDGKFEKTISGHKMG 472
LK T+ HT V+++ N + + S+S DK I +W AY G ++ ++GH
Sbjct: 7 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY-GVAQRRLTGHSHF 65
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
+ DV SSD + +S S D L++W+L++G + GH+ V F+ + IVS+S
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASR 125
Query: 653 DESVR 667
D +++
Sbjct: 126 DRTIK 130
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 76.6 bits (180), Expect = 1e-14
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Frame = +2
Query: 221 GGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSA 400
GG P+ LS + S++ + +K L GH AV F +G ++ + S
Sbjct: 267 GGFRKHHRAPSILSACHAIAKPSTMVQKMQNIK-KLRGHRNAVYCAIFDRSGRYVITGSD 325
Query: 401 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
D+L+KIW + GH+ I+D+A SS++ L+ SAS+D ++VW L G + L
Sbjct: 326 DRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVL 385
Query: 581 KGHSNYVFCCNFNP-QSNL--IVSSSFDESVR 667
+GH+ V F+P Q+++ ++SSS D + R
Sbjct: 386 RGHTGAVTAIAFSPRQASVYQLLSSSDDGTCR 417
Score = 49.2 bits (112), Expect = 2e-06
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH ++ + S N +AS+S D +I++W DG + GH ++ +A+S +
Sbjct: 345 GHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASV 404
Query: 512 ---VSASDDKTLKVWELSSGKCLKTL---------------KGHSNYVFCCNFNPQSNLI 637
+S+SDD T ++W+ + L + S+ + CC +N +
Sbjct: 405 YQLLSSSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSTSNASQSHQILCCAYNANGTIF 464
Query: 638 VSSSFDESVR 667
V+ S D + R
Sbjct: 465 VTGSSDSNAR 474
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Frame = +2
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSS 646
G++ + WS D+R +++A D + VW + G + L GHS + + +P + +S+
Sbjct: 599 GVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDVHPFNPRIAMSA 658
Query: 647 SFD 655
+D
Sbjct: 659 GYD 661
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--ISDVAWSSDSRLIV 514
+ V+ + +S + ++ ++ D I +W A DG ++GH + DV + R+ +
Sbjct: 598 RGVNMIIWSLDNRFVLAAIMDCRICVWNAADGSLVHCLTGHSESSYVLDV-HPFNPRIAM 656
Query: 515 SASDDKTLKVWELSSGKCLK 574
SA D +W++ G +K
Sbjct: 657 SAGYDGKTIIWDIWEGIPIK 676
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 76.6 bits (180), Expect = 1e-14
Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 496
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D +++ SDD T KVW+ + C++TL+GH++ V F+P+ +I++ S D +VR
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V S KF +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 527 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDESVR 667
D +K+W+ G C + +GHS+YV FNP+ +N S+S D +++
Sbjct: 120 DMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIK 168
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFH 238
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
+ +I++ S+D T+++W ++ + TL V+ + S +V +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVV-IGYDE 292
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/118 (22%), Positives = 56/118 (47%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
+K LA ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFV 66
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++SSS D ++
Sbjct: 67 ARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 508
H+ + V P ++ SSS D LIK+W G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNT 157
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 616
SAS D+T+K+W L S TL H V C ++
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 503 RLIVSASDDKTLKV 544
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 496
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D +++ SDD T KVW+ + C++TL GH++ V F+P+ +I++ S D +VR
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V S KF P +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 527 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDESVR 667
D +K+W+ +G C + +GHS+YV FNP+ +N S+S D +++
Sbjct: 120 DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIK 168
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
+ +I++ S+D T+++W ++ + TL V+ + S +V +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVV-IGYDE 292
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 508
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 616
SAS D+T+K+W L S TL H V C ++
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/118 (21%), Positives = 54/118 (45%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++SSS D ++
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 503 RLIVSASDDKTLKV 544
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 496
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D +++ SDD T KVW+ + C++TL GH++ V F+P+ +I++ S D +VR
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V S KF P +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 527 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDESVR 667
D +K+W+ +G C + +GHS+YV FNP+ +N S+S D +++
Sbjct: 120 DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIK 168
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
+ +I++ S+D T+++W ++ + TL V+ + S +V +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVV-IGYDE 292
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 508
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 616
SAS D+T+K+W L S TL H V C ++
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/118 (21%), Positives = 54/118 (45%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++SSS D ++
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 503 RLIVSASDDKTLKV 544
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 75.4 bits (177), Expect = 3e-14
Identities = 42/117 (35%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAW--SS 496
GH+ V V F+P AS+S D+ IKIW G+ D F T+ H+ G++ V +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF--TLDAHQKGVNCVDYFTGG 197
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D +++ SDD T KVW+ + C++TL GH++ V F+P+ +I++ S D +VR
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V S KF P +W+ + + D I+++ K H I VA ++S+SD
Sbjct: 60 VRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSD 119
Query: 527 DKTLKVWELSSG-KCLKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDESVR 667
D +K+W+ +G C + +GHS+YV FNP+ +N S+S D +++
Sbjct: 120 DMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIK 168
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGE--WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
FTL H K V+ V + G+ +L + S D K+W +T+ GH +S V +
Sbjct: 179 FTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFH 238
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
+ +I++ S+D T+++W ++ + TL V+ + S +V +DE
Sbjct: 239 PELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSSRRVV-IGYDE 292
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 2/96 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWS-SDSRL 508
H+ + V P ++ SSS D LIK+W +G + GH + V ++ D+
Sbjct: 98 HSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNT 157
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 616
SAS D+T+K+W L S TL H V C ++
Sbjct: 158 FASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDY 193
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/118 (21%), Positives = 54/118 (45%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
+K A ++ V SV P W+ +S + IW K+ ++ + +
Sbjct: 7 IKRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFI 66
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ +V+ +DD ++V+ ++ +K + HS+Y+ C +P ++SSS D ++
Sbjct: 67 PRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIK 124
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/74 (31%), Positives = 37/74 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT VS+V F P + + S D ++IW A + E T++ + + + S
Sbjct: 224 TLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYIKSS 283
Query: 503 RLIVSASDDKTLKV 544
R +V D+ T+ V
Sbjct: 284 RRVVIGYDEGTIMV 297
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 74.5 bits (175), Expect = 6e-14
Identities = 38/134 (28%), Positives = 62/134 (46%)
Frame = +2
Query: 266 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 445
+A + + K + TL T GH ++ V F P+G++L ++S DK ++W G
Sbjct: 315 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 374
Query: 446 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 625
GH + +A+ D L S D +VW+L +G+ + +GH VF NF+P
Sbjct: 375 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 434
Query: 626 SNLIVSSSFDESVR 667
+ S D R
Sbjct: 435 GYHLASGGEDNQCR 448
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/114 (31%), Positives = 58/114 (50%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L H + + V FSP + LA++SAD+ K+W DG +T GH ++ VA+ +
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKT-DGTLLQTFEGHLDRLARVAFHPSGK 352
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + S DKT ++W++++G L +GHS V+ F L S D R
Sbjct: 353 YLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLAR 406
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH+++V + F +G AS D L ++W G+ GH + V +S + +
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSSSFDESV 664
S +D ++W+L K L + H+N V + PQ + ++S+D V
Sbjct: 439 ASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKV 490
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRL 508
GH K V SV FSPNG LAS D +IW K I H +S V + +
Sbjct: 421 GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ +AS D + +W +K+L GH + V + S+ I + S D +++
Sbjct: 481 LATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIK 533
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 496
+ + H VS VK+ P G +LA++S D + IW D K+++GH+ ++ + ++
Sbjct: 459 YIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITA 518
Query: 497 DSRLIVSASDDKTLKVWELSSG 562
DS I + S D+T+K+W SSG
Sbjct: 519 DSSCIATVSHDRTIKLW-TSSG 539
Score = 31.9 bits (69), Expect = 0.39
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+++L +LAGH V+S+ + + +A+ S D+ IK+W
Sbjct: 497 DFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 74.1 bits (174), Expect = 7e-14
Identities = 48/160 (30%), Positives = 70/160 (43%), Gaps = 11/160 (6%)
Frame = +2
Query: 218 HGGPSASLSGPNSLSQSAPQSNKSS-VAKPNYTLKF-TLAGHTKAVSSVKFSPNGEWLAS 391
H GP+ + N++S + ++ + K T T GH V+ VK+ P G LAS
Sbjct: 406 HSGPTLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLAS 465
Query: 392 SSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS---------SDSRLIVSASDDKTLKV 544
S D KIW F + H I + WS + + SAS D T+K+
Sbjct: 466 CSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKL 525
Query: 545 WELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
W+ GK L + GH V+ F+P I S S D+S+
Sbjct: 526 WDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSI 565
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Frame = +2
Query: 311 TLKFTLAGHTKAVSSVKFSPNGEW---------LASSSADKLIKIWGAYDGKFEKTISGH 463
T L HTK + ++++SP G LAS+S D +K+W A GK + +GH
Sbjct: 481 TFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGH 540
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 643
+ + +A+S + I S S DK++ +W + GK +KT G+ C +N + N I +
Sbjct: 541 REPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGNGGIFEVC-WNKEGNKIAA 599
Query: 644 SSFDESV 664
D SV
Sbjct: 600 CFADNSV 606
Score = 56.4 bits (130), Expect = 2e-08
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Frame = +2
Query: 272 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 451
P S S + PN ++ L GHT V + +SP+ LAS S D +IW +G F+
Sbjct: 246 PTSQTSHI--PNSDVRI-LEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAV 302
Query: 452 ISG---------HKMG--------ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
+G H G ++ + W+ + L+ + S D ++W L +G+ + TL
Sbjct: 303 HTGRNINALILKHAKGKSNEKSKDVTTLDWNGEGTLLATGSCDGQARIWTL-NGELISTL 361
Query: 581 KGHSNYVFCCNFNPQSNLIVSSSFDES 661
H +F +N + + +++ S D +
Sbjct: 362 SKHKGPIFSLKWNKKGDYLLTGSVDRT 388
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/142 (22%), Positives = 65/142 (45%)
Frame = +2
Query: 242 SGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+G +L + ++ + N L TL+ H + S+K++ G++L + S D+ +W
Sbjct: 333 NGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVW 392
Query: 422 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
++++ H DV W ++ S S D + + ++ + KT GH V
Sbjct: 393 DVKAEEWKQQFEFHSGPTLDVDWRNNVSFATS-STDSMIYLCKIGETRPAKTFTGHQGEV 451
Query: 602 FCCNFNPQSNLIVSSSFDESVR 667
C ++P +L+ S S D + +
Sbjct: 452 NCVKWDPTGSLLASCSDDSTAK 473
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Frame = +2
Query: 371 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 550
N A+SS D +I + + + KT +GH+ ++ V W L+ S SDD T K+W
Sbjct: 417 NNVSFATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWN 476
Query: 551 LSSGKCLKTLKGHSNYVFCCNF--------NPQSNL-IVSSSFDESVR 667
+ + L+ H+ ++ + NP L + S+SFD +V+
Sbjct: 477 IKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVK 524
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 73.3 bits (172), Expect = 1e-13
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 13/160 (8%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNY-------------TLKFTLAGHTKAVSSVKFS 367
PS+S GP SL+ ++ S+ SS+ Y T + H AV++++++
Sbjct: 57 PSSSRGGP-SLAVTSIASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYN 115
Query: 368 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
G LAS S D I +W + GH+ ++D+ + + +VS+S DK L+VW
Sbjct: 116 KVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVW 175
Query: 548 ELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+L + C++ + GH + V+ + +P+ +V+ S D+ +R
Sbjct: 176 DLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELR 215
Score = 70.5 bits (165), Expect = 9e-13
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 2/121 (1%)
Frame = +2
Query: 311 TLKFTLA--GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 484
+LKF L+ GH V + S +GE + + S DK +KIWG G K+I H + V
Sbjct: 571 SLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGV 630
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ ++ + S D+ +K W+ + L TL+GH ++C + + + +V+ S D S+
Sbjct: 631 KFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSM 690
Query: 665 R 667
R
Sbjct: 691 R 691
Score = 64.1 bits (149), Expect = 8e-11
Identities = 34/107 (31%), Positives = 56/107 (52%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V +V SP+ + +A + D +K++ KF ++ GHK+ + + SSD LIV+ S
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 527 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
DK LK+W L G C K++ H + V F ++ + S D V+
Sbjct: 603 DKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVK 649
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/92 (28%), Positives = 43/92 (46%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
F L GH V+ + F G+ L SSS DK +++W + +SGH + V +
Sbjct: 142 FRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPE 201
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 595
R +V+ S D+ L+ + + +L SN
Sbjct: 202 ERYVVTGSADQELRFYAVKEYSSNGSLVSDSN 233
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
++ H +V VKF N +L S D+L+K W A + T+ GH I +A S+
Sbjct: 619 SIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRG 678
Query: 503 RLIVSASDDKTLKVWELS 556
+V+ S D++++ W+ S
Sbjct: 679 DFLVTGSHDRSMRRWDRS 696
Score = 45.2 bits (102), Expect = 4e-05
Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIW----GAYDGKFEK--TISGHK-MGISD---- 481
H + S+ PN + SAD +K W GK K T+S K M ++D
Sbjct: 486 HGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKATKKLTVSNVKSMKMNDDVLA 545
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
VA S D++ I A D T+KV+ + S K +L GH V C + + LIV+ S D++
Sbjct: 546 VAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKN 605
Query: 662 VR 667
++
Sbjct: 606 LK 607
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Frame = +2
Query: 341 KAVSSVKFSPNGE-----WLASSSADKLIKIWGAYDGKFEKTIS----GHKMGISDVAWS 493
+ +SS F P LA S + ++ + + KT++ GH+ + V S
Sbjct: 356 RKISSFSFCPTAPKESLGTLALSLNNNSLEFYSLKSSENAKTVTIEHQGHRSDVRSVTLS 415
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
D+ L++S S + +K+W S+G CL+T+ S Y C PQ+
Sbjct: 416 EDNTLLMSTSHSE-VKIWNPSTGSCLRTI--DSGYGLCSLIVPQN 457
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 73.3 bits (172), Expect = 1e-13
Identities = 39/121 (32%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVA 487
L T +GHTK VS+++F P G L S+ D +KIW Y+ GK +T GH + D+
Sbjct: 274 LVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDIC 333
Query: 488 WSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCN-FNPQSNLIVSSSFDES 661
+S+D ++A DK +K W+ +G+ + T G YV N + + N++++ D+
Sbjct: 334 FSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKK 393
Query: 662 V 664
+
Sbjct: 394 I 394
Score = 50.4 bits (115), Expect = 1e-06
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA---YDGKFEKTISGHKMG--IS 478
+K+ H ++ S+ PNG WLA+ S D I I+ + +K +GH +
Sbjct: 447 IKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYAC 506
Query: 479 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFD 655
V +S D R ++S + W+ S K +TLK H+ ++P + + + + +D
Sbjct: 507 QVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWD 566
Query: 656 ESVR 667
++
Sbjct: 567 GLIK 570
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Frame = +2
Query: 449 TISGHKMGISDVAW-SSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP 622
T SGH G+S + + L++SA D +K+W++ +SGKC++T GH+ V F+
Sbjct: 277 TWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSN 336
Query: 623 QSNLIVSSSFDESVR 667
+ +++ +D++++
Sbjct: 337 DGSKFLTAGYDKNIK 351
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Frame = +2
Query: 356 VKFSPNGEW---LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
VK +P+ + L + +DK I W G+ + H ++ + + ++R V++SD
Sbjct: 373 VKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSD 432
Query: 527 DKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLIVSSSFDESV 664
DK+L+VWE +K + + H + + + +P N + + S D +
Sbjct: 433 DKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQI 479
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 71.7 bits (168), Expect = 4e-13
Identities = 31/95 (32%), Positives = 50/95 (52%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L H + SP ++LA++S+DK +KIW K EK ++GH+ + D +S D
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 610
+V+AS D T ++W + +GK + H CC
Sbjct: 273 YLVTASSDTTARLWSMRAGKEEMVYQAHRKATVCC 307
Score = 51.6 bits (118), Expect = 5e-07
Identities = 23/72 (31%), Positives = 38/72 (52%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
+ H I S ++ + +AS DKT+K+W L K K L GH +V+ C+F+
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 632 LIVSSSFDESVR 667
+V++S D + R
Sbjct: 273 YLVTASSDTTAR 284
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 466
+ L+ L GH + V FS +GE+L ++S+D ++W GK E H+
Sbjct: 249 FKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHR 301
Score = 35.1 bits (77), Expect = 0.042
Identities = 19/78 (24%), Positives = 35/78 (44%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
HTK V +V F G + S S D +KIW + ++ ++ V + ++
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELI 141
Query: 515 SASDDKTLKVWELSSGKC 568
S + ++VW+L + C
Sbjct: 142 SGDQNGNIRVWDLRADLC 159
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/46 (21%), Positives = 26/46 (56%)
Frame = +2
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSS 646
+ +AS D+T+++W+ +G+C + + +V P+ +V++
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAA 58
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/69 (20%), Positives = 32/69 (46%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H + V + ++ S S+D ++K+W+L +C + + S V +P ++
Sbjct: 83 HTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSP-VNTVVLHPNQTELI 141
Query: 641 SSSFDESVR 667
S + ++R
Sbjct: 142 SGDQNGNIR 150
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Frame = +2
Query: 278 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------K 439
S ++ P+ + + +L H AV++++FSP+GE LAS + + IW + K
Sbjct: 44 SGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
Query: 440 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 619
K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV ++
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWD 163
Query: 620 PQSNLIVSSSFDESVR 667
P + + S S D + R
Sbjct: 164 PLAKYVASLSSDRTCR 179
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
+L+ H K V +++SP+ +L S S D IW G + + H + VAW +
Sbjct: 107 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA 166
Query: 503 RLIVSASDDKTLKVW 547
+ + S S D+T +++
Sbjct: 167 KYVASLSSDRTCRIY 181
Score = 44.8 bits (101), Expect = 5e-05
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK---------TISGHKMGISDVAWS 493
K V +V F P LA++ AD IK+W G+ EK +++ H ++ + +S
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 494 SDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
L+ S +D L +W+L S K K+L H V ++P ++S S D
Sbjct: 74 PSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVD 133
Query: 656 ES 661
S
Sbjct: 134 NS 135
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/136 (27%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Frame = +2
Query: 278 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG------K 439
S ++ P+ + + +L H AV++++FSP+GE LAS + + IW + K
Sbjct: 44 SGQAEKKVPSVSYQSSLTYHGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWK 103
Query: 440 FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 619
K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV ++
Sbjct: 104 VHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWD 163
Query: 620 PQSNLIVSSSFDESVR 667
P + + S S D + R
Sbjct: 164 PLAKYVASLSSDRTCR 179
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
+L+ H K V +++SP+ +L S S D IW G + + H + VAW +
Sbjct: 107 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA 166
Query: 503 RLIVSASDDKTLKVW 547
+ + S S D+T +++
Sbjct: 167 KYVASLSSDRTCRIY 181
Score = 44.8 bits (101), Expect = 5e-05
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK---------TISGHKMGISDVAWS 493
K V +V F P LA++ AD IK+W G+ EK +++ H ++ + +S
Sbjct: 14 KPVLTVDFHPISGLLATAGADYDIKLWLINSGQAEKKVPSVSYQSSLTYHGCAVNTIRFS 73
Query: 494 SDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
L+ S +D L +W+L S K K+L H V ++P ++S S D
Sbjct: 74 PSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVD 133
Query: 656 ES 661
S
Sbjct: 134 NS 135
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 70.1 bits (164), Expect = 1e-12
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Frame = +2
Query: 176 PLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSS--VAKPNYTLKFT-----LAG 334
P+G H A Q G + G + AP + +AKP+ ++ L G
Sbjct: 184 PIGMRWPHMHADQVRGISLREIGGGFARHHRAPSIRAACYVIAKPSSMVQKMQNIKRLRG 243
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H AV +G ++ + S D+L+K+W + GH+ I+D+A SS++ I
Sbjct: 244 HRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIA 303
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN---LIVSSSFDESVR 667
SAS+D ++VW L G + L+GH+ V F+P+ ++SSS D + R
Sbjct: 304 SASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCR 357
Score = 46.8 bits (106), Expect = 1e-05
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS---SDS 502
GH ++ + S N ++AS+S D +I++W DG + GH ++ +A+S
Sbjct: 285 GHEGDITDLAVSSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSP 344
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTL-------------------KGHSNYVFCCNFNPQ 625
++S+SDD T ++W+ + + S+ +FCC FN
Sbjct: 345 YQLLSSSDDGTCRIWDARGAQFAPRIYVPRPPSPDGKNSGPSSSNAQQSHQIFCCAFNAS 404
Query: 626 SNLIVSSSFDESVR 667
++ V+ S D R
Sbjct: 405 GSVFVTGSSDTLAR 418
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +2
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH--SNYVFCCN-FNPQSNLIV 640
G++ +AWS D+R +++A D + VW S G + +L GH S YV + FNP+ + +
Sbjct: 546 GVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDVHPFNPR--IAM 603
Query: 641 SSSFD 655
S+ +D
Sbjct: 604 SAGYD 608
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG--ISDVAWSSDSRLIV 514
+ V+ + +S + ++ ++ D I +W A DG +++GH + DV + R+ +
Sbjct: 545 RGVNMIAWSLDNRFVLAAIMDCRICVWNASDGSLVHSLTGHTASTYVMDV-HPFNPRIAM 603
Query: 515 SASDDKTLKVWELSSG 562
SA D VW++ G
Sbjct: 604 SAGYDGKTIVWDIWEG 619
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 69.7 bits (163), Expect = 2e-12
Identities = 36/113 (31%), Positives = 57/113 (50%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH +VS + FS +G+ LAS D +++I+ A G + + G GI V W
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGH 168
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++++ S+D +L +W L GH+ V C +F P LI + S D S+
Sbjct: 169 IVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASL 221
Score = 66.1 bits (154), Expect = 2e-11
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 4/164 (2%)
Frame = +2
Query: 188 VPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAK-PNYTLKFTLAGHTKAVSSVKF 364
V GHP + T G ++ +SL+ S + + + +L HT +V VKF
Sbjct: 235 VKGHP--YHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKF 292
Query: 365 SPNGEWL---ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKT 535
SP+ + A+ DK + IW + I H+ G++ + W S+ + + + T
Sbjct: 293 SPSSATIPLAATGGMDKKLIIWDLQHST-PRFICEHEEGVTSLTWIGTSKYLATGCANGT 351
Query: 536 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ +W+ G C+ T GH + V + + ++ IVS S D + R
Sbjct: 352 VSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTAR 395
Score = 63.7 bits (148), Expect = 1e-10
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Frame = +2
Query: 311 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 490
TLK L G + V++ P G + + S D + +W A + SGH + ++ +
Sbjct: 146 TLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDF 205
Query: 491 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY---VFCCNFNPQSNLIVSSSFDES 661
+ D +LI + SDD +L VW + + + +KGH + + C + N S+L +S S D S
Sbjct: 206 TPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGS 265
Query: 662 V 664
V
Sbjct: 266 V 266
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWL-ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
T GH + ++ SP L A+ D +W +G + + GHK +S +A+S D
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+L+ S D +++++ SSG L G + ++P+ +++++ S D S+
Sbjct: 125 GQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLAGSEDCSL 179
Score = 44.4 bits (100), Expect = 7e-05
Identities = 22/74 (29%), Positives = 41/74 (55%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H + V+S+ + ++LA+ A+ + IW + G T GH+ + ++ S+++ IV
Sbjct: 327 HEEGVTSLTWIGTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIV 386
Query: 515 SASDDKTLKVWELS 556
S S D T +V+E S
Sbjct: 387 SVSVDNTARVFESS 400
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 449 TISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 625
T +GHK + +A S +D+ L+ + D +W++ +G L GH + V C F+
Sbjct: 65 TFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYD 124
Query: 626 SNLIVSSSFDESVR 667
L+ S D V+
Sbjct: 125 GQLLASGGLDGVVQ 138
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Frame = +2
Query: 230 SASLSGPNSLSQSAPQSNKSSV-AKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSAD 403
S +GP + ++ SN SV + P++ T+A GH ++V ++ + G L S +
Sbjct: 175 SNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTE 234
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
K++++W G + GH + + S R +S S D +++W+L +CL T
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 584 GHSNYVFCCNFNPQSNLIVSSSFDE 658
H++ V+ NP + + S D+
Sbjct: 295 VHTDSVWALACNPSFSHVYSGGRDQ 319
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGA-YDGKF-EKTISGHKMGISDVAWSSDSRLIVSASDDKTL 538
S + +L + S D +K W D F T H ++D A + +S L VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTL-VSCSSDTTV 107
Query: 539 KVWE-LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSS 646
K W+ LS G C +TL+ HS+YV C ++N +V+S
Sbjct: 108 KTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVAS 144
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 637
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 638 VSSSFDESVR 667
+S S D +R
Sbjct: 271 LSGSSDSMIR 280
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GHT V + G + S S+D +I++W + T + H + +A +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 506 LIVSASDDKTLKVWELSS 559
+ S D+ L + +L++
Sbjct: 311 HVYSGGRDQCLYLTDLAT 328
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 68.5 bits (160), Expect = 4e-12
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Frame = +2
Query: 230 SASLSGPNSLSQSAPQSNKSSV-AKPNYTLKFTLA-GHTKAVSSVKFSPNGEWLASSSAD 403
S +GP + ++ SN SV + P++ T+A GH ++V ++ + G L S +
Sbjct: 175 SNGANGPVTSLRTVGSSNNISVQSSPSHGYTPTIAKGHKESVYALAMNDTGTMLVSGGTE 234
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
K++++W G + GH + + S R +S S D +++W+L +CL T
Sbjct: 235 KVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA 294
Query: 584 GHSNYVFCCNFNPQSNLIVSSSFDE 658
H++ V+ NP + + S D+
Sbjct: 295 VHTDSVWALACNPSFSHVYSGGRDQ 319
Score = 56.4 bits (130), Expect = 2e-08
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGA-YDGKF-EKTISGHKMGISDVAWSSDSRLIVSASDDKTL 538
S + +L + S D +K W D F T H ++D A + +S L VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGESTL-VSCSSDTTV 107
Query: 539 KVWE-LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSS 646
K W+ LS G C +TL+ HS+YV C ++N +V+S
Sbjct: 108 KTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVAS 144
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/70 (27%), Positives = 34/70 (48%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 637
GHK + +A + ++VS +K L+VW+ +G L+GH++ V +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 638 VSSSFDESVR 667
+S S D +R
Sbjct: 271 LSGSSDSMIR 280
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/78 (23%), Positives = 35/78 (44%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GHT V + G + S S+D +I++W + T + H + +A +
Sbjct: 251 LRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFS 310
Query: 506 LIVSASDDKTLKVWELSS 559
+ S D+ L + +L++
Sbjct: 311 HVYSGGRDQCLYLTDLAT 328
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 68.1 bits (159), Expect = 5e-12
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 7/143 (4%)
Frame = +2
Query: 215 THGGPSASLSGPNSLSQSAPQSNKSSVAKP--NYTLKFTLAG-HTKAVSSVKFSPNGEWL 385
T G +SG NS S + +N SV N LK ++ G H + ++SPNGEW+
Sbjct: 13 TERGRGILISG-NSKSDTILYTNGRSVVTLDLNNPLKVSIYGEHAYPATVARYSPNGEWI 71
Query: 386 ASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAWSSDSRLIVSASDDK---TLKVWEL 553
AS ++IWGAY+ K G I D+ WS+D IV++ D K ++ +
Sbjct: 72 ASGDVSGTVRIWGAYNDHVLKNEFKVLAGRIDDLQWSADGMRIVASGDGKGKSLVRAFMW 131
Query: 554 SSGKCLKTLKGHSNYVFCCNFNP 622
SG + GHS V C P
Sbjct: 132 DSGSNVGEFDGHSRRVLSCAIKP 154
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS------GH 463
P + K + H+ V+ V+F+P+G + S+DK I YDGK + + GH
Sbjct: 175 PPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGII---YDGKTCEILGELSSDDGH 231
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELS 556
K I V+WS D + +++ S DK+ K+W++S
Sbjct: 232 KGSIYAVSWSPDGKQVLTVSADKSAKIWDIS 262
Score = 47.6 bits (108), Expect = 7e-06
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 3/129 (2%)
Frame = +2
Query: 290 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHK 466
S+ + T + L H A+S +++SP+ AS+ ++ +W + + K + H
Sbjct: 475 SINGDSLTEEAVLERHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHS 534
Query: 467 MGISDVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKG-HSNYVFCCNFNPQSNLIV 640
I+ +AWS +S ++ + S D + V+E+ T+KG H V+ F S+ +V
Sbjct: 535 ARINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSH-VV 593
Query: 641 SSSFDESVR 667
SS D +R
Sbjct: 594 SSGEDACIR 602
Score = 39.5 bits (88), Expect = 0.002
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTIS--GHKMGISDV---- 484
GH ++ +V +SP+G+ + + SADK KIW D G T++ G G+ D+
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGC 289
Query: 485 AWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGH-SNYVFCCNFNPQSNLIVSSSFD 655
W +D IV+ S T+ ++ S K GH N ++ I+S S+D
Sbjct: 290 LWQNDH--IVTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYD 346
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
Frame = +2
Query: 410 IKIWGAYD-GKFEKTISGHKMGISDVA-WSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
I I+ A D K SGH +S +A ++ I+S S D + W L G C K +
Sbjct: 305 ISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKLQR 364
Query: 584 GHSNYVFCCNFNPQSNLIVSSSFDESV 664
++ + C F IV+S +D +
Sbjct: 365 TQNSQIKC--FAAHEEEIVTSGYDNKI 389
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 66.5 bits (155), Expect = 1e-11
Identities = 34/113 (30%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 508
AGH V SV + P L S D+L+K+W G+ ++ GHK + V W+ +
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESV 664
+++AS D+ +K++++ + K L++ +GH+ V ++P VS S D S+
Sbjct: 325 LLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSI 377
Score = 57.2 bits (132), Expect = 9e-09
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 2/117 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSD 499
+L GH V SVK++ NG WL ++S D++IK++ K ++ GH ++ +AW
Sbjct: 305 SLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCH 364
Query: 500 SRLIVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
VS S D ++ W + ++ H N V+ ++P L+ S S D + +
Sbjct: 365 EEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTK 421
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/71 (30%), Positives = 39/71 (54%)
Frame = +2
Query: 455 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNL 634
+GH + V W L+VS D+ +K+W+ SG+ L +L GH N V +N N
Sbjct: 265 AGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNW 324
Query: 635 IVSSSFDESVR 667
++++S D+ ++
Sbjct: 325 LLTASKDQIIK 335
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 3/124 (2%)
Frame = +2
Query: 305 NYTLKFTLAGHTK---AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
++ KF A K +++ V ++P+G L + S +W FE + H I
Sbjct: 109 SFAAKFVHASLNKNRCSINRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPI 168
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ WS + +VS D TLK W+ + H + +F S S D
Sbjct: 169 RSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDD 228
Query: 656 ESVR 667
+V+
Sbjct: 229 TTVK 232
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/89 (24%), Positives = 41/89 (46%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 484
++ + L H + + S+ +S N ++ S +K W + + HK I D+
Sbjct: 154 SFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDL 213
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCL 571
++ S SDD T+KVW+ + KC+
Sbjct: 214 SFCKTDLKFCSCSDDTTVKVWDFT--KCV 240
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 332 GHTKAVSSVKFSP-NGEWLASSSADKLIKIW-GAYDGKFEKTISGHKMGISDVAWSSDSR 505
GHTK V+S+ + P + E+ S S+D I W ++ + + H + D+AW
Sbjct: 350 GHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGY 409
Query: 506 LIVSASDDKTLKVW 547
L+ S S+D T K W
Sbjct: 410 LLCSGSNDHTTKFW 423
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 66.1 bits (154), Expect = 2e-11
Identities = 36/124 (29%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDG--KFEKTISGHKMG 472
P+ T + L HT V ++FS NG++LASSS D+ IW + DG + T+ GH
Sbjct: 263 PSQTAQI-LESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKP 321
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
+ + WS D R +++ ++ ++ W++ SG C+ + C + P I++
Sbjct: 322 VIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAGMT 381
Query: 653 DESV 664
D S+
Sbjct: 382 DRSI 385
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEKTISGHKMG---ISDVAWSSDSRLIV 514
++S S + +++ + ++ I++W D K GHK I I
Sbjct: 446 ITSFSLSNDNKYILVNLLNQEIRLWNIEGDPKIVSRYKGHKRSRFIIRSCFGGYKQAFIA 505
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSSSFDESVR 667
S S+D + +W S+GK + L GH+ V C +++P + +++ S+S D ++R
Sbjct: 506 SGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIR 557
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 380 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL 553
++AS S D + IW GK + GH ++ V+WS ++ ++ SASDD T+++W L
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGL 561
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 296 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
A + +LK TL GH K V ++ +SP+ + + A+++I+ W G + K GI
Sbjct: 305 ADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSG--DCVHMYEKGGI 362
Query: 476 SDVA--WSSDSRLIVSASDDKTLKVWEL 553
S ++ W D + I++ D+++ +W+L
Sbjct: 363 SPISCGWYPDGQGIIAGMTDRSICMWDL 390
Score = 33.9 bits (74), Expect = 0.098
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWG 424
L GH AV+ V +SP N LAS+S D I+IWG
Sbjct: 527 LPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWG 560
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 508
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 549 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 608
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ S + ++ W++++ C++ +KG S V F P++ ++++ + +V
Sbjct: 609 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTV 656
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 516 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 575
Query: 542 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R
Sbjct: 576 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 619
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/112 (27%), Positives = 54/112 (48%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH+ V SV +SPNGE +AS S D +K+W G +S V + +
Sbjct: 673 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 731
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + +++W KC+ T+ GH + +P + ++ S+S D+SV+
Sbjct: 732 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVK 782
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 344 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 634 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 693
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
S+D +K+W LSSG C+ L N F+P
Sbjct: 694 SED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHP 726
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +2
Query: 248 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 412
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 560 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 618
Query: 413 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGH 589
+ W + + + G + V + + ++A+ + T+ ++++ ++ K + KGH
Sbjct: 619 RFWD-INASCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 674
Query: 590 SNYVFCCNFNPQSNLIVSSSFD 655
S+ V ++P L+ S S D
Sbjct: 675 SSNVHSVCWSPNGELVASVSED 696
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 532
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 721 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 779
Query: 533 TLKVWE 550
++K+W+
Sbjct: 780 SVKIWK 785
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++S D +L+ SA DK + +W + + + T + H++ + F P S + +SSFD+++
Sbjct: 515 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 574
Query: 665 R 667
+
Sbjct: 575 K 575
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 752 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 508
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ S + ++ W++++ C++ +KG S V F P++ ++++ + +V
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTV 658
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 542 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/112 (27%), Positives = 54/112 (48%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH+ V SV +SPNGE +AS S D +K+W G +S V + +
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + +++W KC+ T+ GH + +P + ++ S+S D+SV+
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVK 784
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 344 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
S+D +K+W LSSG C+ L N F+P
Sbjct: 696 SED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHP 728
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +2
Query: 248 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 412
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 413 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGH 589
+ W + + + G + V + + ++A+ + T+ ++++ ++ K + KGH
Sbjct: 621 RFWD-INASCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 590 SNYVFCCNFNPQSNLIVSSSFD 655
S+ V ++P L+ S S D
Sbjct: 677 SSNVHSVCWSPNGELVASVSED 698
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 532
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 533 TLKVWE 550
++K+W+
Sbjct: 782 SVKIWK 787
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++S D +L+ SA DK + +W + + + T + H++ + F P S + +SSFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 665 R 667
+
Sbjct: 577 K 577
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 508
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ S + ++ W++++ C++ +KG S V F P++ ++++ + +V
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTV 658
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 542 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/112 (27%), Positives = 54/112 (48%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH+ V SV +SPNGE +AS S D +K+W G +S V + +
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + +++W KC+ T+ GH + +P + ++ S+S D+SV+
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVK 784
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 344 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
S+D +K+W LSSG C+ L N F+P
Sbjct: 696 SED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHP 728
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +2
Query: 248 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 412
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 413 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGH 589
+ W + + + G + V + + ++A+ + T+ ++++ ++ K + KGH
Sbjct: 621 RFWD-INASCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 590 SNYVFCCNFNPQSNLIVSSSFD 655
S+ V ++P L+ S S D
Sbjct: 677 SSNVHSVCWSPNGELVASVSED 698
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 532
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 533 TLKVWE 550
++K+W+
Sbjct: 782 SVKIWK 787
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++S D +L+ SA DK + +W + + + T + H++ + F P S + +SSFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 665 R 667
+
Sbjct: 577 K 577
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 508
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ S + ++ W++++ C++ +KG S V F P++ ++++ + +V
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTV 658
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 542 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/112 (27%), Positives = 54/112 (48%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH+ V SV +SPNGE +AS S D +K+W G +S V + +
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + +++W KC+ T+ GH + +P + ++ S+S D+SV+
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVK 784
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 344 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
S+D +K+W LSSG C+ L N F+P
Sbjct: 696 SED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHP 728
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +2
Query: 248 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 412
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 413 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGH 589
+ W + + + G + V + + ++A+ + T+ ++++ ++ K + KGH
Sbjct: 621 RFWD-INASCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 590 SNYVFCCNFNPQSNLIVSSSFD 655
S+ V ++P L+ S S D
Sbjct: 677 SSNVHSVCWSPNGELVASVSED 698
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 532
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 533 TLKVWE 550
++K+W+
Sbjct: 782 SVKIWK 787
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++S D +L+ SA DK + +W + + + T + H++ + F P S + +SSFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 665 R 667
+
Sbjct: 577 K 577
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/112 (31%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAW-SSDSRL 508
H ++ V+F PN LA+SS DK IKIW A D G F +TISGH + + + + L
Sbjct: 551 HAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTEL 610
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ S + ++ W++++ C++ +KG S V F P++ ++++ + +V
Sbjct: 611 LCSCDSNNDIRFWDINA-SCVRAVKGASTQV---RFQPRTGQFLAAASENTV 658
Score = 62.5 bits (145), Expect = 2e-10
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
FS +G+ LAS+ DK + IW + E T H I+DV + +S + ++S DKT+K
Sbjct: 518 FSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIK 577
Query: 542 VWELSS-GKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
+W+ S G L+T+ GH+ V +F+P ++ L+ S + +R
Sbjct: 578 IWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIR 621
Score = 54.0 bits (124), Expect = 9e-08
Identities = 31/112 (27%), Positives = 54/112 (48%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH+ V SV +SPNGE +AS S D +K+W G +S V + +
Sbjct: 675 GHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDL 733
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + +++W KC+ T+ GH + +P + ++ S+S D+SV+
Sbjct: 734 LVIGGYQAIELWNTMENKCM-TVAGHECVISALAQSPSTGVVASASHDKSVK 784
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Frame = +2
Query: 344 AVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
A + V+F P G++LA++S + + + K GH + V WS + L+ S
Sbjct: 636 ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASV 695
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
S+D +K+W LSSG C+ L N F+P
Sbjct: 696 SED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHP 728
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Frame = +2
Query: 248 PNSLSQSAPQSNKS----SVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLI 412
PNS + +K+ + P Y L+ T++GH V S+ F P E L S ++ I
Sbjct: 562 PNSTQLATSSFDKTIKIWDASDPGYFLR-TISGHAAPVMSIDFHPKKTELLCSCDSNNDI 620
Query: 413 KIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGH 589
+ W + + + G + V + + ++A+ + T+ ++++ ++ K + KGH
Sbjct: 621 RFWD-INASCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGH 676
Query: 590 SNYVFCCNFNPQSNLIVSSSFD 655
S+ V ++P L+ S S D
Sbjct: 677 SSNVHSVCWSPNGELVASVSED 698
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 532
SV F P+ L + I++W + K T++GH+ IS +A S + ++ SAS DK
Sbjct: 723 SVVFHPSYPDLLVIGGYQAIELWNTMENKC-MTVAGHECVISALAQSPSTGVVASASHDK 781
Query: 533 TLKVWE 550
++K+W+
Sbjct: 782 SVKIWK 787
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++S D +L+ SA DK + +W + + + T + H++ + F P S + +SSFD+++
Sbjct: 517 SFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTI 576
Query: 665 R 667
+
Sbjct: 577 K 577
Score = 33.9 bits (74), Expect = 0.098
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+AGH +S++ SP+ +AS+S DK +KIW
Sbjct: 754 TVAGHECVISALAQSPSTGVVASASHDKSVKIW 786
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 64.9 bits (151), Expect = 5e-11
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = +2
Query: 338 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 517
T V+ FS +G+ LAS+ DK +W K + T+ H I+D+ +S + +
Sbjct: 651 TTKVTCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLAT 710
Query: 518 ASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
+S DKT++VW+ + G L+T GHS+ V +F+P + +LI S D +R
Sbjct: 711 SSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIR 762
Score = 61.3 bits (142), Expect = 6e-10
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Frame = +2
Query: 317 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWS 493
K TL HT ++ ++FSP+ LA+SS DK +++W A + G +T GH ++ + +
Sbjct: 686 KTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMGHSSMVTSLDFH 745
Query: 494 S-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
LI S +D ++ W +++G C + KG S + F P+ +++S
Sbjct: 746 PIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQI---RFQPRVGKYLAAS 795
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Frame = +2
Query: 350 SSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
+ ++F P G++LA+SSA+ L+ + ++ GH I+ V W + S S+
Sbjct: 780 TQIRFQPRVGKYLAASSAN-LVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSE 838
Query: 527 DKTLKVWEL---SSGKCLKTLKGHSNYVFCCNFNP 622
D +KVW L S G+C+ L + N C F+P
Sbjct: 839 D-MVKVWTLGTGSEGECVHELSCNGNKFQSCVFHP 872
Score = 48.8 bits (111), Expect = 3e-06
Identities = 32/123 (26%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FEKTISGHKMGIS 478
++ +L GH ++SV + P+G++LAS S D ++K+W G E + +G+K
Sbjct: 810 IRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTLGTGSEGECVHELSCNGNKFQSC 868
Query: 479 DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
+ S L++ ++L++W +S K + TL H + + + L+ S+S D+
Sbjct: 869 VFHPAYPSLLVIGCY--QSLELWNMSENKTM-TLPAHEGLITSLAVSTATGLVASASHDK 925
Query: 659 SVR 667
V+
Sbjct: 926 LVK 928
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/47 (31%), Positives = 29/47 (61%)
Frame = +2
Query: 410 IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 550
+++W + K T+ H+ I+ +A S+ + L+ SAS DK +K+W+
Sbjct: 886 LELWNMSENK-TMTLPAHEGLITSLAVSTATGLVASASHDKLVKLWK 931
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
TL H ++S+ S +AS+S DKL+K+W
Sbjct: 898 TLPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 64.5 bits (150), Expect = 6e-11
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 634
GH + D++WS L+ S+S DKT+++W+LSS CLK HS+YV C FNP N
Sbjct: 466 GHLDDVLDLSWSKSQHLL-SSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNY 523
Query: 635 IVSSSFDESVR 667
+S S D VR
Sbjct: 524 FISGSLDAKVR 534
Score = 32.7 bits (71), Expect = 0.23
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+ H ++ S+KFS +G +LAS+ D +I+IW
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIW 390
Score = 30.7 bits (66), Expect = 0.91
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-D 499
+ GH V + +S + + L SSS DK +++W K S H ++ + ++ D
Sbjct: 463 SFVGHLDDVLDLSWSKS-QHLLSSSMDKTVRLWDLSSKTCLKVFS-HSDYVTCIQFNPVD 520
Query: 500 SRLIVSASDDKTLKVWEL 553
+S S D +++W +
Sbjct: 521 DNYFISGSLDAKVRIWSI 538
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
I HK I + +S D R + SA +D +++W++
Sbjct: 359 IQAHKGSIWSIKFSLDGRYLASAGEDCVIQIWKV 392
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 64.1 bits (149), Expect = 8e-11
Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H S+ F N L + D+ +K+W G K++ G I D+A + D++ ++
Sbjct: 230 HEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVI 289
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
+A+ L VW++SSG+ TL GH++ V + + S +VS+++D +++
Sbjct: 290 AATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIK 341
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 490
++ TL GHT V +V S + + S++ D+ IK+W + G T+ + +
Sbjct: 307 VRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICL 365
Query: 491 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
S D + S D L++W++ +GK L + GHS+ V + + N I++S D
Sbjct: 366 SIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKMGI--SDVAWS 493
+AGH+ AV+SV S NG + +S D + ++ + T+ SG+++ S S
Sbjct: 395 VAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCIS 454
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 619
D + + S D ++ VW LS G + LK ++ + CC+++
Sbjct: 455 PDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 496
Score = 48.8 bits (111), Expect = 3e-06
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 371 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVW 547
N +A++S++ L +W G+ T++GH + V S SR +VSA+ D+T+K+W
Sbjct: 285 NKSVIAATSSNNLF-VWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 548 ELSSGKCLKTLKGHSNYVFCC 610
+L G C T+ SN C
Sbjct: 344 DLHKGYCTNTVLFTSNCNAIC 364
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Frame = +2
Query: 338 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 517
T +++ S +G + S D +++W GK ++GH ++ V+ S + I++
Sbjct: 357 TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 416
Query: 518 ASDDKTLKVWELSSGKCLKTLKGH-----SNYVFCCNFNPQSNLIVSSSFDESV 664
+ D V++ + + TL+ SN+ C +P + + + S D SV
Sbjct: 417 SGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSC-ISPDDDYVAAGSADGSV 469
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/61 (22%), Positives = 27/61 (44%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV 544
SP+ +++A+ SAD + +W G + I +WS + + SA + +
Sbjct: 454 SPDDDYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCT 513
Query: 545 W 547
W
Sbjct: 514 W 514
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/95 (33%), Positives = 41/95 (43%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV 484
N+ TL GHT V + +SP+ LAS S D + IW G + GH + V
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGV 166
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH 589
W I S SDDKT+ +W S GH
Sbjct: 167 TWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH 201
Score = 62.9 bits (146), Expect = 2e-10
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-----------------KFEKT 451
TL H +V+ V+++ N ++AS S D++I+I G K T
Sbjct: 54 TLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMT 113
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
+ GH + D+ WS D ++ S S D T+ +W + +G C L+GH + V ++P +
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 632 LIVSSSFDESV 664
I S S D++V
Sbjct: 174 FIASQSDDKTV 184
Score = 44.0 bits (99), Expect = 9e-05
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSAD--KLIKIWGAYDGKFE--KTISGHKMGISDVAWSSDSRLIV 514
+ S+ PNGE A+ D + K D K T+ H ++ V W+ +SR +
Sbjct: 16 IFSIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVA 75
Query: 515 SASDDKTLKVWELSSG-----------------KCLKTLKGHSNYVFCCNFNPQSNLIVS 643
S SDD+ +++ E G K + TL+GH+ V N++P +++ S
Sbjct: 76 SGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLAS 135
Query: 644 SSFDESV 664
S D +V
Sbjct: 136 GSLDNTV 142
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL--IKIWGAYDGKFEKTISGHKMGI 475
P++ L+ + +++ F+ G WL A KL + +W + GH +
Sbjct: 294 PDFICIHLLSISRQKLTTAVFNERGNWLTFGCA-KLGQLLVWDWRTETYILKQQGHYFDV 352
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ ++S+S D
Sbjct: 353 NCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLD 412
Query: 656 ESVR 667
+VR
Sbjct: 413 GTVR 416
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/97 (27%), Positives = 47/97 (48%)
Frame = +2
Query: 296 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
+K +K L+GH V + FSP + LASSS D +++W + K H +
Sbjct: 463 SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDV 522
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 586
VA+ D + + S++ D + W+ G + T++G
Sbjct: 523 LTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 559
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH V+ V +SP+ + LA+ + D +K+W G T + H ++ + + +D+ +
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 512 VSASDDKTLKVWELSSGKCLKT 577
+SAS D T++ W+ K KT
Sbjct: 407 LSASLDGTVRAWDFKRYKNYKT 428
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/105 (23%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 529
S+ P+G+ + + + D I +W G+ + +SGH+ + + +S ++L+ S+S D
Sbjct: 439 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 498
Query: 530 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
T+++W++ + K H++ V F P + SS+ D +
Sbjct: 499 YTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQI 543
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +2
Query: 311 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDV 484
T T HT AV+++ F + L S+S D ++ W K KT + + +S
Sbjct: 382 TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLT 441
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
A S + D + VW +G+ L GH V F+P + L+ SSS+D +V
Sbjct: 442 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 665 R 667
R
Sbjct: 502 R 502
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H V +V F P+G+ LASS+ D I W +G TI G + I+ +D R
Sbjct: 518 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR-DIAGGRVMTDRRSAA 576
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYV 601
++S K S+ G S Y+
Sbjct: 577 NSSSGKCFTTLCYSADGGYILAAGTSRYI 605
Score = 31.1 bits (67), Expect = 0.69
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FE--KTISGHKMGISDVAWSSDSR 505
V ++KFSPNG+++A KL++IW + + FE +T + + + WS DS
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIWRSPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSD 154
Query: 506 LIVSASDDKTLKVWELS 556
++ S D + + ++
Sbjct: 155 YLLVGSRDLAARAFTIA 171
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 63.7 bits (148), Expect = 1e-10
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL--IKIWGAYDGKFEKTISGHKMGI 475
P++ L+ + +++ F+ G WL A KL + +W + GH +
Sbjct: 334 PDFICIHLLSISRQKLTTAVFNERGNWLTFGCA-KLGQLLVWDWRTETYILKQQGHYFDV 392
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ V +S DS+L+ + +DD +KVW + SG C T H+N V +F ++ ++S+S D
Sbjct: 393 NCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLD 452
Query: 656 ESVR 667
+VR
Sbjct: 453 GTVR 456
Score = 52.0 bits (119), Expect = 3e-07
Identities = 27/97 (27%), Positives = 47/97 (48%)
Frame = +2
Query: 296 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
+K +K L+GH V + FSP + LASSS D +++W + K H +
Sbjct: 503 SKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDV 562
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 586
VA+ D + + S++ D + W+ G + T++G
Sbjct: 563 LTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEG 599
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GH V+ V +SP+ + LA+ + D +K+W G T + H ++ + + +D+ +
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 512 VSASDDKTLKVWELSSGKCLKT 577
+SAS D T++ W+ K KT
Sbjct: 447 LSASLDGTVRAWDFKRYKNYKT 468
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/105 (23%), Positives = 54/105 (51%), Gaps = 1/105 (0%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKL-IKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 529
S+ P+G+ + + + D I +W G+ + +SGH+ + + +S ++L+ S+S D
Sbjct: 479 SLTADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWD 538
Query: 530 KTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
T+++W++ + K H++ V F P + SS+ D +
Sbjct: 539 YTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQI 583
Score = 49.6 bits (113), Expect = 2e-06
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +2
Query: 311 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDV 484
T T HT AV+++ F + L S+S D ++ W K KT + + +S
Sbjct: 422 TCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLT 481
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
A S + D + VW +G+ L GH V F+P + L+ SSS+D +V
Sbjct: 482 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 665 R 667
R
Sbjct: 542 R 542
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/89 (29%), Positives = 38/89 (42%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H V +V F P+G+ LASS+ D I W +G TI G + I+ +D R
Sbjct: 558 HNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYTIEGRR-DIAGGRVMTDRRSAA 616
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYV 601
++S K S+ G S Y+
Sbjct: 617 NSSSGKCFTTLCYSADGGYILAAGTSRYI 645
Score = 33.9 bits (74), Expect = 0.098
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGK-----FE--KTISGHKMGISDVAWSSDSR 505
V ++KFSPNG+++A KL++IW + + FE +T + + + WS DS
Sbjct: 96 VGALKFSPNGKFIA-VGIGKLVEIWRSPGFRRAVLPFERVRTFANSDDKVVSLEWSLDSD 154
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF 604
++ S D +++ C++ LKG N F
Sbjct: 155 YLLVGSRDLAARLF------CVRKLKGVLNKPF 181
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 625
+ GH + D+AWS L+ S+S DKT+++W LSS CLK HS+YV C FNP
Sbjct: 508 SFQGHVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVD 565
Query: 626 SNLIVSSSFDESVR 667
+S S D VR
Sbjct: 566 DRYFISGSLDAKVR 579
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 508
GH V + +S + + L SSS DK +++W K S H ++ + ++ D R
Sbjct: 511 GHVDDVLDLAWSKS-QHLLSSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDRY 568
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+S S D ++VW + + + H C + P ++ S+ S R
Sbjct: 569 FISGSLDAKVRVWSIPDRQVVDWYDLHEMVTSAC-YTPDGQGVLVGSYKGSCR 620
Score = 35.1 bits (77), Expect = 0.042
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +2
Query: 194 GHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPN 373
G ++ T +S GP + Q KSS + H ++ S+KFS +
Sbjct: 367 GRRSSSATDDSQESSFHGPERVR--VRQYGKSSKELTALYKTQEIQAHNGSIWSIKFSLD 424
Query: 374 GEWLASSSADKLIKIW 421
G++LAS+ D +I IW
Sbjct: 425 GKYLASAGEDCIIHIW 440
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Frame = +2
Query: 335 HTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS--SDS 502
H K ++ +F P + E L +SS D I++ D + G + S ++ S +D
Sbjct: 645 HQKKITGFQFVPGSSSEVLVTSS-DSRIRVVDGTD--LVNKLKGFRNTSSQISASITADG 701
Query: 503 RLIVSASDDKTLKVWELSS 559
+ +VSAS+D + +W+ S
Sbjct: 702 KYVVSASEDSHVYIWKYES 720
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 62.9 bits (146), Expect = 2e-10
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKM 469
+P+ + TL GH+K V+SVKF + + + ++SADK ++IW DG + T++ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSA 310
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNLIVS 643
+ V ++ VSAS D T ++LSSG CL + S V F+P LI+
Sbjct: 311 EVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP-DGLILG 369
Query: 644 SSFDESV 664
+ +SV
Sbjct: 370 TGTSQSV 376
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--- 553
+A+ D ++ G+ T++GH ++ V + DS L+++AS DKT+++W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 554 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ C TL HS V +P + VS+S D
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLD 330
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/106 (20%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 350 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 529
++ F P+G L + ++ ++KIW GH ++ +++S + + +A++D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 530 KTLKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+++W+L + K+ L +N V F+P + + ++ D V
Sbjct: 417 -GVRLWDLRKLRNFKSFLSADANSV---EFDPSGSYLGIAASDIKV 458
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 62.9 bits (146), Expect = 2e-10
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-GAYDGKFE--KTISGHKM 469
+P+ + TL GH+K V+SVKF + + + ++SADK ++IW DG + T++ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSA 310
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV--FCCNFNPQSNLIVS 643
+ V ++ VSAS D T ++LSSG CL + S V F+P LI+
Sbjct: 311 EVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP-DGLILG 369
Query: 644 SSFDESV 664
+ +SV
Sbjct: 370 TGTSQSV 376
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--- 553
+A+ D ++ G+ T++GH ++ V + DS L+++AS DKT+++W
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 554 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ C TL HS V +P + VS+S D
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLD 330
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/106 (20%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 350 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 529
++ F P+G L + ++ ++KIW GH ++ +++S + + +A++D
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 530 KTLKVWELSSGKCLKT-LKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+++W+L + K+ L +N V F+P + + ++ D V
Sbjct: 417 -GVRLWDLRKLRNFKSFLSADANSV---EFDPSGSYLGIAASDIKV 458
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/94 (35%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKF--EKTISGHKM 469
+P+ + TL GH+K V+S+KF + + + ++S+DK ++IWG + DG + T+ H
Sbjct: 251 RPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSA 310
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL 571
+ V + ++ VSAS D T ++LSSG CL
Sbjct: 311 EVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCL 344
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 3/96 (3%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
+A+ D ++ G+ T++GH ++ + + D+ L+++AS DKT+++W S
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSED 296
Query: 563 ---KCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
TLK HS V + + VS+S D +
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDST 332
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/120 (18%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKMGI 475
NYT + TL H+ V +V ++ S+S D + G + S + +
Sbjct: 298 NYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNY 357
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ A+ D ++ + + +K+W++ S + GH+ + +F+ + +++ D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/76 (23%), Positives = 38/76 (50%)
Frame = +2
Query: 350 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 529
++ F P+G L + +A ++KIW GH I+ +++S + + +A+ D
Sbjct: 358 TAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD 417
Query: 530 KTLKVWELSSGKCLKT 577
+++W+L K +T
Sbjct: 418 -GVRLWDLRKLKNFRT 432
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 61.7 bits (143), Expect = 4e-10
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Frame = +2
Query: 290 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 469
S+ +P+ K V SV +SPNG+ LA S D I ++ K + GH M
Sbjct: 142 SIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNM 201
Query: 470 GISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSS 646
+ + +S D R++ S SDD + + + L ++ GH+++V + +P I +
Sbjct: 202 PVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATG 261
Query: 647 SFDESVR 667
S D +VR
Sbjct: 262 SSDRTVR 268
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
L GH V S+ FSP + L S S D + + A ++SGH + V S D
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
I + S D+T+++W+L ++T+ H++ V+ F P
Sbjct: 256 GAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/88 (29%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Frame = +2
Query: 311 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 490
TL +++GHT V SV SP+G +A+ S+D+ +++W +T+S H + VA+
Sbjct: 234 TLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAF 293
Query: 491 SSD------SRLIVSASDDKTLKVWELS 556
+ + S SDDK++ +++ S
Sbjct: 294 RPPGGTGVRAGRLASVSDDKSVSLYDYS 321
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
L + S D+ +K+W + +T +GH +G++ +A + S+S D ++V+++ +
Sbjct: 33 LLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTN 92
Query: 563 KCLKTLKGHSNYVFCCNFNPQSNLI-VSSSFDESVR 667
+ L+ + V+ F P+ ++ V+ SV+
Sbjct: 93 ATIAVLEAPPSEVWGMQFEPKGTILAVAGGSSASVK 128
Score = 37.5 bits (83), Expect = 0.008
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 14/118 (11%)
Frame = +2
Query: 347 VSSVKFSPNGEWLA-SSSADKLIKIWGAYDGKFEKTIS-------------GHKMGISDV 484
V ++F P G LA + + +K+W + T+S K + V
Sbjct: 105 VWGMQFEPKGTILAVAGGSSASVKLWDTASWRLISTLSIPRPDAPKPSDKTSSKKFVLSV 164
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
AWS + + + S D T+ V+++ K L L+GH+ V F+P ++ S D+
Sbjct: 165 AWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGSDD 222
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
L+++ S D+T+K+W ++T GHS V +P + SSS D VR
Sbjct: 32 LLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVR 85
Score = 32.3 bits (70), Expect = 0.30
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS--- 493
T GH+ V+++ P+G ASSS D +++ +D TI+ + S+V W
Sbjct: 55 TNTGHSLGVAALAAHPSGIIAASSSIDSFVRV---FDVDTNATIAVLEAPPSEV-WGMQF 110
Query: 494 --SDSRLIVSASDDKTLKVWELSSGKCLKTL 580
+ L V+ ++K+W+ +S + + TL
Sbjct: 111 EPKGTILAVAGGSSASVKLWDTASWRLISTL 141
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 61.3 bits (142), Expect = 6e-10
Identities = 29/74 (39%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 625
++ GH I D++WS S+L++S+S DKT+++W++ + CLK L H++YV C F+P
Sbjct: 501 SLKGHLDAILDLSWSK-SQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVD 558
Query: 626 SNLIVSSSFDESVR 667
N +S S D +R
Sbjct: 559 ENYFLSGSLDAKIR 572
Score = 33.9 bits (74), Expect = 0.098
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+ H AV ++KFS + +LAS AD++I +W
Sbjct: 400 IQAHEGAVWTIKFSQDAHYLASGGADRVIHVW 431
Score = 33.9 bits (74), Expect = 0.098
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-D 499
+L GH A+ + +S + + L SSS DK +++W + K + H ++ + +S D
Sbjct: 501 SLKGHLDAILDLSWSKS-QLLLSSSMDKTVRLWD-IETKTCLKLFAHNDYVTCIQFSPVD 558
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 610
+S S D +++W + ++ H C
Sbjct: 559 ENYFLSGSLDAKIRIWSIQDRHVVEWSDLHEMVTAAC 595
Score = 31.5 bits (68), Expect = 0.52
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +2
Query: 341 KAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVA--WSSDSRL 508
+ ++S +FSP N + +SAD I+I DG + G + S ++ +S D +
Sbjct: 640 RKITSFQFSPVNPSEVLVTSADSRIRI---LDGSEVIHKFKGFRNTCSQLSASYSQDGKY 696
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCC 610
I+ AS+D + +W+ + TL S+ F C
Sbjct: 697 IICASEDSQVYLWKNDFHRTRSTLTTQSHEHFHC 730
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 61.3 bits (142), Expect = 6e-10
Identities = 31/71 (43%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 634
GH + D+AWS DS L++SAS DKT+++W +CL H+NYV C FNP N
Sbjct: 270 GHTGDVLDLAWS-DSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNN 327
Query: 635 IVSSSFDESVR 667
S S D R
Sbjct: 328 FASGSIDGKAR 338
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 242 SGPNSLSQSAPQSNKSSVAKPNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKI 418
S ++S+ ++NK S + + + GH + ++KFSP+G++LA+ D ++KI
Sbjct: 165 SSEETMSKVKVKTNKKSHVELSAAYMVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKI 224
Query: 419 W 421
W
Sbjct: 225 W 225
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 556
I+GHK I + +S D + + + +D +K+W ++
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRIT 228
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-Q 625
+ +GH + D++WS S+L++S+S DKT+++W++ + CLK L H++YV C FNP
Sbjct: 514 SFTGHLDDVLDLSWSR-SQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLD 571
Query: 626 SNLIVSSSFDESVR 667
+ +S S D +R
Sbjct: 572 EDYFISGSLDAKIR 585
Score = 31.1 bits (67), Expect = 0.69
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-D 499
+ GH V + +S + L SSS DK +++W K + H ++ V ++ D
Sbjct: 514 SFTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDIETQSCLK-LFAHNDYVTCVQFNPLD 571
Query: 500 SRLIVSASDDKTLKVWELSS 559
+S S D +++W +S+
Sbjct: 572 EDYFISGSLDAKIRIWNISN 591
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+ H + ++KFSP+ LAS+ D I +W
Sbjct: 407 IQAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
Score = 27.5 bits (58), Expect = 8.5
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Frame = +2
Query: 341 KAVSSVKFSP-NGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDV--AWSSDSRL 508
K +++ +FSP N + +SAD I++ DG + + G K S + +++ D++
Sbjct: 652 KKITAFQFSPINPSEVLVTSADSRIRV---LDGTELVQKFRGFKNMNSQMTASYTVDAKH 708
Query: 509 IVSASDDKTLKVWE 550
IV AS+D + VW+
Sbjct: 709 IVCASEDSQVYVWK 722
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Frame = +2
Query: 443 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFN 619
E+ + GH+ ++ +AW+S+ L++S SDD + +W SS K L ++ GH+ +FC F
Sbjct: 43 EQELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFV 102
Query: 620 PQSN--LIVSSSFDESVR 667
P+++ L+VS + D VR
Sbjct: 103 PETSDELVVSGAGDAEVR 120
Score = 41.5 bits (93), Expect = 5e-04
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Frame = +2
Query: 254 SLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL-IKIWGAY 430
SLS + S+ + + L+ G K + + + + +SS D+ + GA
Sbjct: 548 SLSDDEGRDTDSNSMRGSLNLRIHRVGDDKPMENTVDNASSGTASSSQNDRTSYQPEGAI 607
Query: 431 DGKFEKTISGHKMGISDVAWSS----DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 598
D K + GH +D+ +S I S SDD +WE +G+ +K L G +
Sbjct: 608 DMK--RRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKQTGRLMKVLVGDESV 665
Query: 599 VFCCNFNPQSNLIVSSSFDESVR 667
+ C +P +++ +S D +++
Sbjct: 666 LNCIQCHPFDSVVATSGIDNTIK 688
Score = 35.9 bits (79), Expect = 0.024
Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 236 SLSGPNSLSQSAPQSNKSSVAKPN-YTLKFTLAGHTKAVSSVK----FSPNGEWLASSSA 400
++ +S + S+ Q++++S +K GH + +K GE++AS S
Sbjct: 582 TVDNASSGTASSSQNDRTSYQPEGAIDMKRRYVGHCNVGTDIKQASFLGQRGEYIASGSD 641
Query: 401 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
D IW G+ K + G + ++ + ++ ++ D T+K+W
Sbjct: 642 DGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIW 690
Score = 35.1 bits (77), Expect = 0.042
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGI--SDVAWSS 496
L GH V+++ ++ NG L S S D I IW K +I +GH I + +
Sbjct: 46 LEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPET 105
Query: 497 DSRLIVSASDDKTLKVWELS 556
L+VS + D ++++ S
Sbjct: 106 SDELVVSGAGDAEVRLFNTS 125
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISDVAWS-S 496
GH K V SV ++ NG LAS S D+ +IW K + GH + + W
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPK 77
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLK 583
S L+ +AS DK++++W+ SGKC + ++
Sbjct: 78 HSDLVATASGDKSVRLWDARSGKCTQQVE 106
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-----SSGKCLKTLKGHSNYVFCCNFNP 622
GHK + VAW+S+ + S S D+T ++W + S K L+ LKGH++ V ++P
Sbjct: 18 GHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLE-LKGHTDSVDQLCWDP 76
Query: 623 Q-SNLIVSSSFDESVR 667
+ S+L+ ++S D+SVR
Sbjct: 77 KHSDLVATASGDKSVR 92
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/113 (22%), Positives = 53/113 (46%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL HT + P G + A SAD L+ +W D +T + + + ++++
Sbjct: 186 TLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSG 245
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
I SAS+D + + + +G+ + + + + +NP+ NL+ + D++
Sbjct: 246 EYIASASEDLFIDIANVQTGRTVHQIPCRA-AMNSVEWNPKYNLLAYAGDDKN 297
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
L GHT +V + + P + + +A++S DK +++W A GK + + I ++ + D
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDG 120
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLK 583
+ + D L + ++ K L K
Sbjct: 121 THVAVGNRDDELTILDVRKFKPLHRRK 147
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V ++ F+ +GE++AS+S D I I G+ I + ++ V W+ L+ A D
Sbjct: 236 VRTISFNYSGEYIASASEDLFIDIANVQTGRTVHQIPC-RAAMNSVEWNPKYNLLAYAGD 294
Query: 527 DKTLK 541
DK K
Sbjct: 295 DKNPK 299
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 59.3 bits (137), Expect = 2e-09
Identities = 37/124 (29%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKMG 472
P+ T++ +A H V V+FS +G++LA++S+D IW D + + T+ H+
Sbjct: 213 PSETVQILVA-HKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNP 271
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVF---CCNFNPQSNLIVS 643
+S V+WS D +++ + + LK+W++ +G L+ G++N F C + P S +V
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVLKLWDVDTG-VLRHTFGNNNTGFTVSSCAWFPDSTRLVC 330
Query: 644 SSFD 655
S D
Sbjct: 331 GSSD 334
Score = 55.2 bits (127), Expect = 4e-08
Identities = 33/112 (29%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEKTISGHKMG---ISDVAWSSDSRLIV 514
++S+ S +G++ + + + I +W A + K SGH+ I DS I
Sbjct: 400 ITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIA 459
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSSSFDESVR 667
S S+D + +W L + K L+ L GHS V C ++NP++ ++ S+S D+++R
Sbjct: 460 SGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIR 511
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 490
LKF+ +K V F + ++AS S D + IW + K + +SGH M ++ V+W
Sbjct: 434 LKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSW 493
Query: 491 S-SDSRLIVSASDDKTLKVW 547
+ + R++ SASDD+T+++W
Sbjct: 494 NPKNPRMLASASDDQTIRIW 513
Score = 34.7 bits (76), Expect = 0.056
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWG 424
L+GH+ V+ V ++P N LAS+S D+ I+IWG
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWG 514
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 58.8 bits (136), Expect = 3e-09
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY---DGKFE--KTISGHKMGISDVAW 490
L GH V SV ++ +G LA+ DK + IW D +F+ ++GH + V W
Sbjct: 88 LRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLW 147
Query: 491 SSDSRLIVSASDDKTLKVW----ELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSS 646
++ S S D T+K+W E C++TL GHS+ V+ +FN + +V+
Sbjct: 148 HPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTC 207
Query: 647 SFDESVR 667
S D +V+
Sbjct: 208 SDDLAVK 214
Score = 46.4 bits (105), Expect = 2e-05
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 35/149 (23%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIW-----------------GAYDGKF--- 442
L GHT V +V ++P + +AS SADK ++IW G++DG
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHRLGSFDGNTCVW 75
Query: 443 ------EKTIS---GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK-----CLKTL 580
+++S GH+ + V+W++ L+ + DK++ +WE+ + + L
Sbjct: 76 ENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 581 KGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
GHS V ++P +++ S S+D +++
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNTIK 164
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 8/106 (7%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFE--KTIS----GHKMGISD 481
L GH++ V V + P + L S S D IKIW + D G + +T+S GH +
Sbjct: 135 LTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFN 619
+++++ +V+ SDD +K+W+ + +++ +G+ + C +
Sbjct: 195 ISFNAAGDKMVTCSDDLAVKIWKTDISR-MQSGEGYVPWTHVCTLS 239
Score = 33.9 bits (74), Expect = 0.098
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-----------TISG-HKMGI 475
GH+ V S+ F+ G+ + + S D +KIW + + T+SG H I
Sbjct: 187 GHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSGFHDRTI 246
Query: 476 SDVAWSSDSRLIVSASDDKTLKVW 547
V WS D +I S + D T++++
Sbjct: 247 YSVHWSRDG-VIASGAGDDTIQLF 269
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/106 (29%), Positives = 54/106 (50%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L H V+S+ S + LAS S D +K++ G+F+ I+ + I +A++
Sbjct: 58 LRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGS 117
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 643
L+ +A DD+ +K+ G ++ LKGH V +F+P L+ S
Sbjct: 118 LLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLAS 163
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Frame = +2
Query: 209 HQTHGGPSASLSGPNSLSQSAPQSNKSSVAK-PNYTLKFTLAGHTKAVSSVKFSPNGEWL 385
H G S +LS ++L S + + K P+ + + T + + F+ +G L
Sbjct: 60 HHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLL 119
Query: 386 ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
A++ D+ IK+ +DG + + GHK ++ + + + L+ S T+ WEL +G
Sbjct: 120 AAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGV 179
Query: 566 CLKTLKG 586
TLKG
Sbjct: 180 VSFTLKG 186
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Frame = +2
Query: 320 FTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM--GISDVAW 490
F L G H +A+ + ++PNG+++A+S DK + +W D ++ I HK I ++W
Sbjct: 231 FALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLW---DVDKKQDIDRHKFEERICCMSW 287
Query: 491 SSDSRLIVSASDDKTLKVWE 550
+ + VWE
Sbjct: 288 KPNGNALSVIDAKGRYGVWE 307
Score = 34.3 bits (75), Expect = 0.074
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Frame = +2
Query: 305 NYTLKFTLAG-------HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG- 460
N + FTL G +T V+ ++SP+G LA + ++ + G+ + G
Sbjct: 177 NGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGD 236
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 637
H I + W+ + + I ++ DK + +W++ + + K + C ++ P N +
Sbjct: 237 HLEAICYLTWAPNGKYIATSGLDKQVLLWDVDKKQDIDRHK-FEERICCMSWKPNGNAL 294
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 58.8 bits (136), Expect = 3e-09
Identities = 26/67 (38%), Positives = 45/67 (67%)
Frame = +2
Query: 446 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ 625
K ++GH ++D +SS+++ I S+S DKT++VWELS G C++ + G S +C F+P
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQ-YCIRFHPV 268
Query: 626 SNLIVSS 646
+N +S+
Sbjct: 269 NNNFLSA 275
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH+K V+ FS N +++ASSS DK I++W G + I G ++
Sbjct: 212 LTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNN 271
Query: 506 LIVSASDDKTLKVWELSSGKCLKTL 580
+ + + +K L V+ S+G+ +K L
Sbjct: 272 FLSAGNANKELTVFNFSTGRIIKKL 296
Score = 35.5 bits (78), Expect = 0.032
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 509 IVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
IV+ S+D + ++L+ K C+ L+GH V C +N NL+ SS F
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDF 468
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +2
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
S L ASD L LK L GHS V +F+ + I SSS D+++R
Sbjct: 184 SSDILAYGASDGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIR 241
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 57.2 bits (132), Expect = 9e-09
Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS- 496
T H V ++P +G+ AS+S D ++IW + I H I W+
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKY 203
Query: 497 DSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESV 664
D ++ ++S DKT+KVW++ S + L L GH V F+P + +LI S S+D SV
Sbjct: 204 DDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSV 261
Score = 49.2 bits (112), Expect = 2e-06
Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRL 508
H + V SV ++P + +SS D +K+W +T H + W+ +
Sbjct: 105 HAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDV 164
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSSSFDESVR 667
SAS D TL++W++ + H + C++N + ++ +SS D++V+
Sbjct: 165 FASASGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVK 218
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 634
GH + D++WS D+ L+ SAS DKT+++W++ S CL H++YV FNP N
Sbjct: 326 GHTGEVLDISWSKDNYLL-SASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENY 383
Query: 635 IVSSSFDESVR 667
+S S D VR
Sbjct: 384 FMSGSIDGKVR 394
Score = 35.5 bits (78), Expect = 0.032
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
+ H A+ ++KFS +G++LASS D ++++W + K
Sbjct: 217 IKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKVVEDK 254
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 55.6 bits (128), Expect = 3e-08
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 463
K YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 643
+M ++ VA D+ IVS+S D+TLK W +G+ +++ H + + P L VS
Sbjct: 113 QMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPSGEL-VS 167
Query: 644 SSFDESVR 667
S D S++
Sbjct: 168 GSSDASLK 175
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/109 (32%), Positives = 59/109 (54%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL+GHT V + P+ +L S+S D I++W A G+ + GH + V S S
Sbjct: 185 TLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLW-ALSGEVLLEMVGHTSLVYSVDAHS-S 241
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
LIVSAS+D+ K+W+ G C+++L+ H ++ F +++ + S
Sbjct: 242 GLIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIVTACS 287
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 55.6 bits (128), Expect = 3e-08
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKF-SPNGEW----LASSSADKLIKIWGAYDGKFEKTISGH 463
K YT + L GHT V + + P E+ L S S D + +W +G+ +T+ GH
Sbjct: 53 KRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNGENIQTLKGH 112
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVS 643
+M ++ VA D+ IVS+S D+TLK W +G+ +++ H + + P L VS
Sbjct: 113 QMQVTGVA--IDNEDIVSSSVDQTLKRWR--NGQLVESWDAHQSPIQAVIRLPSGEL-VS 167
Query: 644 SSFDESVR 667
S D S++
Sbjct: 168 GSSDASLK 175
Score = 48.8 bits (111), Expect = 3e-06
Identities = 35/109 (32%), Positives = 59/109 (54%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL+GHT V + P+ +L S+S D I++W A G+ + GH + V S S
Sbjct: 185 TLSGHTDTVRGLAVMPDLGFL-SASHDGSIRLW-ALSGEVLLEMVGHTSLVYSVDAHS-S 241
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
LIVSAS+D+ K+W+ G C+++L+ H ++ F +++ + S
Sbjct: 242 GLIVSASEDRHAKIWK--DGVCVQSLE-HPGCIWDAKFLETGDIVTACS 287
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDS 502
L GH ++ + +S +G + S S D+ +IW + + GH + + D SDS
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCC-ISDS 289
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSSSFDESVR 667
LIV+A +D T +VW + G L+ +K H ++ C ++P S+L+V++ FD +++
Sbjct: 290 -LIVTAGEDCTCRVWGV-DGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIK 343
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 422 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNY 598
G Y ++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR 280
Query: 599 VFCCNFNPQSNLIVSSSFDESVR 667
V+ C + +LIV++ D + R
Sbjct: 281 VWDCCIS--DSLIVTAGEDCTCR 301
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDS 502
L GH ++ + +S +G + S S D+ +IW + + GH + + D SDS
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCC-ISDS 289
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSSSFDESVR 667
LIV+A +D T +VW + G L+ +K H ++ C ++P S+L+V++ FD +++
Sbjct: 290 -LIVTAGEDCTCRVWGV-DGTQLEVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIK 343
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 422 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL-KTLKGHSNY 598
G Y ++GH+ I + WS D IVS SDD++ ++WE+ S + + L GHS
Sbjct: 221 GHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVR 280
Query: 599 VFCCNFNPQSNLIVSSSFDESVR 667
V+ C + +LIV++ D + R
Sbjct: 281 VWDCCIS--DSLIVTAGEDCTCR 301
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 55.2 bits (127), Expect = 4e-08
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR-L 508
GH K V SV FSPNG LAS D +IW K I H +S V + R
Sbjct: 170 GHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYF 229
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
+ +AS D + +W +K+L GH + V
Sbjct: 230 LATASHDMNVNIWSGRDFSLVKSLVGHESKV 260
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSS-DSR 505
G + ++ S +G+ L + S + K+W + + GHK ++DV +SS D
Sbjct: 61 GDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDE 120
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNY 598
+ +AS D+T K+W+ + G L+T K S +
Sbjct: 121 CLATASTDRTEKIWK-TDGTLLQTFKASSGF 150
Score = 44.0 bits (99), Expect = 9e-05
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 386 ASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
ASS D L ++W + GH + V +S + + S +D ++W+L K
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Query: 566 CLKTLKGHSNYVFCCNFNPQSN-LIVSSSFDESV 664
L + H N V + PQ + ++S D +V
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNV 239
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTISGH--KMGISDV 484
L + + H VS VK+ P + LA++S D + IW D K++ GH K+ D+
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASLDI 265
Query: 485 AWSSDSR 505
A S SR
Sbjct: 266 AVDSSSR 272
Score = 37.5 bits (83), Expect = 0.008
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Frame = +2
Query: 302 PNYTLKFT-LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI 475
P T K L GH + V+ V FS + E LA++S D+ KIW DG +T
Sbjct: 93 PQVTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKT-DGTLLQTFKA----- 146
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
S+ D +VW+L + + + +GH V +F+P + S D
Sbjct: 147 -------------SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGED 193
Query: 656 ESVR 667
R
Sbjct: 194 NQCR 197
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 634
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 635 IVSSSFDESVR 667
+S S D VR
Sbjct: 378 FISGSIDGKVR 388
Score = 34.3 bits (75), Expect = 0.074
Identities = 10/31 (32%), Positives = 24/31 (77%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+ H ++ ++KFSP+G+++AS+ D ++++W
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 34.3 bits (75), Expect = 0.074
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 508
GH + + +S G +L SSS D+ +++W + +T + H ++ VA++ D
Sbjct: 320 GHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 509 IVSASDDKTLKVWELS 556
+S S D +++W+++
Sbjct: 378 FISGSIDGKVRIWDVT 393
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 443 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 556
++ S H I + +S D + I SA +D ++VW ++
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 55.2 bits (127), Expect = 4e-08
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 634
GH I D++WS L+ S+S D+T+++W + +CL+T H+N+V C FNP N
Sbjct: 320 GHIGEILDLSWSEKGYLL-SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 635 IVSSSFDESVR 667
+S S D VR
Sbjct: 378 FISGSIDGKVR 388
Score = 34.3 bits (75), Expect = 0.074
Identities = 10/31 (32%), Positives = 24/31 (77%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+ H ++ ++KFSP+G+++AS+ D ++++W
Sbjct: 215 SAHDGSILAMKFSPDGKYIASAGEDCVVRVW 245
Score = 34.3 bits (75), Expect = 0.074
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRL 508
GH + + +S G +L SSS D+ +++W + +T + H ++ VA++ D
Sbjct: 320 GHIGEILDLSWSEKG-YLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNY 377
Query: 509 IVSASDDKTLKVWELS 556
+S S D +++W+++
Sbjct: 378 FISGSIDGKVRIWDVT 393
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 443 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 556
++ S H I + +S D + I SA +D ++VW ++
Sbjct: 211 DQEFSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSIT 248
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/115 (26%), Positives = 55/115 (47%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T+ + A+ S+++ + LA++ D + IW GK + GH I + D+
Sbjct: 975 TVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT 1034
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+++ SDD T +VW +S G C L H+ V ++P I++ S D +R
Sbjct: 1035 --LITGSDDWTARVWSVSRGSCDAVLACHAGPVQSVEYSPFDKGIITGSADGLLR 1087
Score = 50.4 bits (115), Expect = 1e-06
Identities = 28/114 (24%), Positives = 59/114 (51%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
L+ TL GHT V ++ S G+ + S S D + +W + + + GH +S V
Sbjct: 891 LRATLKGHTGTVRAIS-SDRGK-IVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKML 948
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
S R +++A+ D T+K+W++ + C+ T+ S+ + ++ + ++ ++ D
Sbjct: 949 SGER-VLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTGILAAAGRD 1001
Score = 50.0 bits (114), Expect = 1e-06
Identities = 24/92 (26%), Positives = 45/92 (48%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH VS VK +GE + +++ D +K+W T+ I + + +
Sbjct: 935 LKGHDSQVSCVKML-SGERVLTAAHDGTVKMWDVRTDMCVATVGRCSSAILSLEYDDSTG 993
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
++ +A D +W++ SGK + LKGH+ ++
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWI 1025
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 389 SSSADKLIKIW--GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
S S D L+KIW + T+ GH + + SSD IVS SDD ++ VW+ +
Sbjct: 872 SGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIVWDKQTT 929
Query: 563 KCLKTLKGHSNYVFC 607
+ L+ LKGH + V C
Sbjct: 930 QLLEELKGHDSQVSC 944
Score = 34.3 bits (75), Expect = 0.074
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG--KFEKTISGHKMGISDVAWSSD 499
LA H V SV++SP + + + SAD L++ W +G K K I+ H I + + +
Sbjct: 1058 LACHAGPVQSVEYSPFDKGIITGSADGLLRFWENDEGGIKCVKNITLHSSSILSIN-AGE 1116
Query: 500 SRLIVSASDD 529
+ L + A+D+
Sbjct: 1117 NWLGIGAADN 1126
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Frame = +2
Query: 296 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-----GAYDGKFEKTISG 460
+ PN + + T ++SS+ FSP + L ++S D ++ W GA K
Sbjct: 12 SNPNKSYEVT-PSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASIS 70
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H + AW D + S DK K+W L SG T+ H + + P NL+
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 641 SSSFDESVR 667
+ S+D++++
Sbjct: 131 TGSWDKTLK 139
Score = 44.0 bits (99), Expect = 9e-05
Identities = 22/72 (30%), Positives = 35/72 (48%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H + V + +G + S DK K+W G T++ H+ I+ +AW L+
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 515 SASDDKTLKVWE 550
+ S DKTLK W+
Sbjct: 131 TGSWDKTLKYWD 142
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 54.4 bits (125), Expect = 6e-08
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Frame = +2
Query: 314 LKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---ISGHKMGISD 481
L+ +LA +T AV+ V +SP+G L + + ++ I+ + G+ + I H ++D
Sbjct: 410 LQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVND 469
Query: 482 VAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSS 649
+A+S ++ +V+ +DKT+KVW+ +G L T +GH Y C + I S++
Sbjct: 470 LAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTA 529
Query: 650 FDESVR 667
D ++
Sbjct: 530 VDGKIK 535
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSAD 403
P +LS +S SA S + T A +S+ F P + +A D
Sbjct: 849 PCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDD 908
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV-----WELSSGKC 568
I+I+ + + + GH+ ++ +A+S+ ++VS+ D L V WE + K
Sbjct: 909 SSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQ 968
Query: 569 LKTLKGHS 592
++ GHS
Sbjct: 969 IQIPSGHS 976
Score = 34.3 bits (75), Expect = 0.074
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLK 541
S N ++ S+S K I ++ K T + +A+ D+ +I DD +++
Sbjct: 854 SKNDSYVMSASGGK-ISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQ 912
Query: 542 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++ + + LKGH V F+ N++VSS D +
Sbjct: 913 IYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQL 953
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 54.4 bits (125), Expect = 6e-08
Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Frame = +2
Query: 314 LKFTLAG-HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---ISGHKMGISD 481
L+ +LA +T AV+ V +SP+G L + + ++ I+ + G+ + I H ++D
Sbjct: 410 LQASLASEYTAAVNRVVWSPDGGLLGVAYSKHIVHIYSYHGGEDLRNHLEIDAHAGNVND 469
Query: 482 VAWSSDSR--LIVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSS 649
+A+S ++ +V+ +DKT+KVW+ +G L T +GH Y C + I S++
Sbjct: 470 LAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTA 529
Query: 650 FDESVR 667
D ++
Sbjct: 530 VDGKIK 535
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSAD 403
P +LS +S SA S + T A +S+ F P + +A D
Sbjct: 849 PCFALSKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDD 908
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKV-----WELSSGKC 568
I+I+ + + + GH+ ++ +A+S+ ++VS+ D L V WE + K
Sbjct: 909 SSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQ 968
Query: 569 LKTLKGHS 592
++ GHS
Sbjct: 969 IQIPSGHS 976
Score = 34.3 bits (75), Expect = 0.074
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLK 541
S N ++ S+S K I ++ K T + +A+ D+ +I DD +++
Sbjct: 854 SKNDSYVMSASGGK-ISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQ 912
Query: 542 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++ + + LKGH V F+ N++VSS D +
Sbjct: 913 IYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQL 953
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 54.4 bits (125), Expect = 6e-08
Identities = 27/86 (31%), Positives = 48/86 (55%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
+ GH + ++ ++++ NG+ L S + D +W A +G+ T GH + S DS
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLK 583
+++ S D+T K+W++ SGK L T K
Sbjct: 93 RLITGSADQTAKLWDVKSGKELFTFK 118
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/72 (27%), Positives = 43/72 (59%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
+ GH+ ++ + ++ + L+ S + D T VW +G+ L T +GHS V+CC+ + S+
Sbjct: 33 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 92
Query: 632 LIVSSSFDESVR 667
+++ S D++ +
Sbjct: 93 RLITGSADQTAK 104
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 511
K ++ + P + + S D I+IW A GK K GHK I+ + ++D
Sbjct: 176 KKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHF 235
Query: 512 VSASDDKTLKVWELSSGKCLKT 577
++ S DKT K+W++ + +KT
Sbjct: 236 LTGSHDKTAKLWDMRTLTLIKT 257
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
K I+ W ++ IVS +D +++W+ +GK LK
Sbjct: 175 KKKINRAVWGPLNQTIVSGGEDAAIRIWDAETGKLLK 211
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
T GH+ AV S + L + SAD+ K+W GK
Sbjct: 74 TYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGK 112
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 54.0 bits (124), Expect = 9e-08
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Frame = +2
Query: 287 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY--DGKFE---KT 451
SS PN + + T T ++SS+ FSP + L ++S D ++ W DG K
Sbjct: 10 SSTNNPNNSYEITPPA-TDSISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKV 68
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
H + AW D + + DK K+W L SG T+ H + P N
Sbjct: 69 SMSHDQPVLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMN 128
Query: 632 LIVSSSFDESVR 667
L+V+ S+D++++
Sbjct: 129 LLVTGSWDKTLK 140
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 53.6 bits (123), Expect = 1e-07
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTIS--GHKMGISDVAWSSDSR 505
H+ V+ +++SP+G + S+DK I+ G K + S GHK I V+WS DS+
Sbjct: 50 HSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSK 109
Query: 506 LIVSASDDKTLKVWELSS----GKCLKTL 580
+++ S DK+ KVWE++ G +KTL
Sbjct: 110 RVLTVSADKSAKVWEVAEDGTIGSVIKTL 138
Score = 36.3 bits (80), Expect = 0.018
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISGHKMGISDVAWSSDS 502
L H A++ +++SP+ AS A++ +W + + + H I+ +AWS ++
Sbjct: 352 LEKHRGALTVIRYSPDLTMFASGDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNN 411
Query: 503 RLIVSASDDKTLKVWELS--SGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+++ + S D + V+E+ + + H V F + SS D SVR
Sbjct: 412 KMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAFIDDCT-VASSGEDASVR 467
Score = 34.7 bits (76), Expect = 0.056
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI---SGHKMGISDVAWSSDSR 505
HT ++S+ +SPN + +A+ S D + ++ D I + H G++ VA+ D
Sbjct: 398 HTARINSLAWSPNNKMVATGSIDTCVIVY-EVDKPASSRITARNAHLGGVNAVAFIDDC- 455
Query: 506 LIVSASDDKTLKVWEL 553
+ S+ +D ++++W +
Sbjct: 456 TVASSGEDASVRLWHI 471
Score = 31.5 bits (68), Expect = 0.52
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 10/118 (8%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD----GKFEKTISGHKMG-----ISDV 484
GH ++ +V +SP+ + + + SADK K+W + G KT+S + G +
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEVAEDGTIGSVIKTLSFMESGGAEDMLVGC 153
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGH-SNYVFCCNFNPQSNLIVSSSFD 655
W +D + VS +L + K L GH N I+S S+D
Sbjct: 154 LWQNDHLITVSLGGTMSLFSAD-DMDKPPLLLSGHIKNVTSLAVLGENQKTILSCSYD 210
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 508
+V+ V +SP+G + + +++++ G D + I H G++D+A+S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSSFDESVR 667
+ + DDKT+KVW+ ++G T +GH Y C ++ I S++ D ++
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIK 533
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVS 517
+AV S N ++ S+S K I ++ K T + +A+ D+ +I
Sbjct: 825 EAVPCFALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAI 883
Query: 518 ASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
DD T++++ + + LKGHS + F+ N++VSS D
Sbjct: 884 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 929
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +2
Query: 389 SSSADKLIKIWGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
S + I W +G ++T G HK + V + + ++A DD ++K W++ + +
Sbjct: 571 SKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQ 630
Query: 566 CLKTLKGHSNYVFC--CNFNPQSNLIVSSSFDESVR 667
L + FN + +L+ S+ D ++
Sbjct: 631 LLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIK 666
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSAD 403
P +LS +S SA S + T A + + F P + +A D
Sbjct: 828 PCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDD 887
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
I+I+ + + + GH I+ +A+S+ ++VS+ D L VW
Sbjct: 888 STIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 935
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 508
+V+ V +SP+G + + +++++ G D + I H G++D+A+S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDIAFSTPNKQLC 478
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSSFDESVR 667
+ + DDKT+KVW+ ++G T +GH Y C ++ I S++ D ++
Sbjct: 479 VTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIK 533
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVS 517
+AV S N ++ S+S K I ++ K T + +A+ D+ +I
Sbjct: 825 EAVPCFALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAI 883
Query: 518 ASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
DD T++++ + + LKGHS + F+ N++VSS D
Sbjct: 884 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 929
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +2
Query: 389 SSSADKLIKIWGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
S + I W +G ++T G HK + V + + ++A DD ++K W++ + +
Sbjct: 571 SKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDTIQ 630
Query: 566 CLKTLKGHSNYVFC--CNFNPQSNLIVSSSFDESVR 667
L + FN + +L+ S+ D ++
Sbjct: 631 LLTAIDADGGLQASPRIRFNKEGSLLAVSANDNMIK 666
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSAD 403
P +LS +S SA S + T A + + F P + +A D
Sbjct: 828 PCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDD 887
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
I+I+ + + + GH I+ +A+S+ ++VS+ D L VW
Sbjct: 888 STIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 935
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/115 (24%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 508
+V+ V +SP+G + + +++++ G D + I H G++D+++S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSSFDESVR 667
+++ DDKT+KVW+ ++G T +GH Y C ++ I S++ D ++
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIK 533
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +2
Query: 389 SSSADKLIKIWGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
S + I W +G ++T G HK + V + + ++A DD ++K W++ + +
Sbjct: 571 SKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQ 630
Query: 566 CLKTLKGHSNYVFC--CNFNPQSNLIVSSSFDESVR 667
L + G FN + +L+ S + ++
Sbjct: 631 LLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIK 666
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVS 517
+AV S N ++ S+S K I ++ K T + +A+ D+ +I
Sbjct: 836 EAVPCFALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAI 894
Query: 518 ASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
DD T++++ + + LKGHS + F+ N++VSS D
Sbjct: 895 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 940
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSAD 403
P +LS +S SA S + T A + + F P + +A D
Sbjct: 839 PCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDD 898
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
I+I+ + + + GH I+ +A+S+ ++VS+ D L VW
Sbjct: 899 STIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 946
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/115 (24%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 508
+V+ V +SP+G + + +++++ G D + I H G++D+++S+ ++
Sbjct: 419 SVNRVIWSPDGSLFGVAYSRHIVQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLC 478
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSSFDESVR 667
+++ DDKT+KVW+ ++G T +GH Y C ++ I S++ D ++
Sbjct: 479 VITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIK 533
Score = 36.7 bits (81), Expect = 0.014
Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 3/96 (3%)
Frame = +2
Query: 389 SSSADKLIKIWGAYDGKFEKTISG-HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
S + I W +G ++T G HK + V + + ++A DD ++K W++ + +
Sbjct: 571 SKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFWDMDAVQ 630
Query: 566 CLKTLKGHSNYVFC--CNFNPQSNLIVSSSFDESVR 667
L + G FN + +L+ S + ++
Sbjct: 631 LLTAIDGDGGLQASPRIRFNKEGSLLAVSGNENVIK 666
Score = 36.7 bits (81), Expect = 0.014
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVS 517
+AV S N ++ S+S K I ++ K T + +A+ D+ +I
Sbjct: 836 EAVPCFALSKNDSYVMSASGGK-ISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAI 894
Query: 518 ASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
DD T++++ + + LKGHS + F+ N++VSS D
Sbjct: 895 GMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGAD 940
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASSSAD 403
P +LS +S SA S + T A + + F P + +A D
Sbjct: 839 PCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDD 898
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
I+I+ + + + GH I+ +A+S+ ++VS+ D L VW
Sbjct: 899 STIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVW 946
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL-IVSAS 523
VSSV F +G A+ +++++ + +T+ H V + +L +VS
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESVR 667
DD +K W+++ + L GH +YV C + +P +++V+ S+D +V+
Sbjct: 156 DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVK 204
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 53.2 bits (122), Expect = 1e-07
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Frame = +2
Query: 317 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKMGISDV 484
K ++ H AV+++ S NG + + SAD+ I++W G+ T+ HK ++ +
Sbjct: 228 KESIKAHDDAVNAIAVSTNGT-VYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNAL 286
Query: 485 AWSSDSRLIVSASDDKTLKVWE---LSSGKCLK-TLKGHSNYVFCCNFNPQSNLIVSSSF 652
A + D ++ S S D+++ VWE S+ ++ L+GH + FN S+L++S S
Sbjct: 287 ALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FN-VSDLLLSGSA 344
Query: 653 DESVR 667
D +VR
Sbjct: 345 DRTVR 349
Score = 51.2 bits (117), Expect = 6e-07
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVA 487
+TL TL H AV+++ + +G L S S D+ I +W D + G G
Sbjct: 270 HTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAI 329
Query: 488 WS--SDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYV 601
S + S L++S S D+T+++W SS CL+ L GH+ V
Sbjct: 330 LSLFNVSDLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPV 372
Score = 33.9 bits (74), Expect = 0.098
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
I S S DKTLK+W S +C +++K H + V
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAV 238
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 634
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 635 IVSSSFDESVR 667
+S S D VR
Sbjct: 412 FISGSIDGKVR 422
Score = 36.3 bits (80), Expect = 0.018
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 433
+ H A+ ++KFSP+G +LAS+ D ++++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVE 282
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNL 634
GH I D++WS ++RL+ SAS D ++++W++ CL + H+NYV FNP +
Sbjct: 354 GHSGDILDISWSKNNRLL-SASVDNSVRLWQIGCEDCL-GIFSHNNYVTSVQFNPVDDDH 411
Query: 635 IVSSSFDESVR 667
+S S D VR
Sbjct: 412 FISGSIDGKVR 422
Score = 36.3 bits (80), Expect = 0.018
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 433
+ H A+ ++KFSP+G +LAS+ D ++++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSVVE 282
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 52.8 bits (121), Expect = 2e-07
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASS---SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 496
L HT AV ++ +SP+ L +S +AD+ I+ W +G +I + ++AWS
Sbjct: 336 LTEHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQLNSIDTGSQ-VCNLAWSK 394
Query: 497 DSRLIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ IVS + +W+ S + TL GHS V +P IV+ + DE++R
Sbjct: 395 NVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLR 453
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
T+ GH + + N L+S S D+ +++ F + GHK + + WS D
Sbjct: 252 TMGGHQTRTGVLAW--NSRILSSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHD 309
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVS 643
R + S +D L VW S + + L H+ V ++P QS+L+ S
Sbjct: 310 DRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLAS 358
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
G +V SV+++ G +++ ++ +++W K +T+ GH+ +AW +SR++
Sbjct: 213 GPNDSVCSVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAW--NSRIL 270
Query: 512 VSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
S S D+ + ++ + L GH + V ++ + S D +
Sbjct: 271 SSGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQL 322
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
T++GH M + +A S D + IV+ + D+TL+ W +
Sbjct: 423 TLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNV 457
Score = 31.5 bits (68), Expect = 0.52
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 430
P+ + TL GH+ V + SP+G+ + + + D+ ++ W +
Sbjct: 416 PSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVF 458
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 52.4 bits (120), Expect = 3e-07
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS--------------GHKMGISD 481
AVS K S N + A S D + ++ + KF + + H I D
Sbjct: 74 AVSFCKTSRNSQLFAVSDEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFD 133
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV-FCCNFNPQSNLIVSSSFD 655
++W +++AS D+T+KVW++ KC L GH+ V C+ S+L+VS S D
Sbjct: 134 ISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRD 192
Score = 45.2 bits (102), Expect = 4e-05
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWS-SDSRLIVSASDDKTL 538
SP+GE++ S S+D IW + + I GH ++ V WS S+ + +ASDD T+
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTV 406
Query: 539 KVWELSSGKC 568
++W + + C
Sbjct: 407 RLWNIENNIC 416
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV-AWSSDSRLI 511
H A+ + + L ++S D+ IK+W + K + GH + + + ++S L+
Sbjct: 127 HYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLL 186
Query: 512 VSASDDKTLKVWEL 553
VS S D +W+L
Sbjct: 187 VSGSRDGCFALWDL 200
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDES 661
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ S S D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 662 VR 667
VR
Sbjct: 170 VR 171
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSDSRLIVS 517
++ + FS +G LAS+ D +KI GK K ++GH+ V + S ++ S
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 518 ASDDKTLKVWELSSGKCLKT 577
S D +++W +G+C++T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDES 661
A+SSD R + S D T+K+ + +GKCLK L GH + F+P+ S ++ S S D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 662 VR 667
VR
Sbjct: 170 VR 171
Score = 44.4 bits (100), Expect = 7e-05
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSDSRLIVS 517
++ + FS +G LAS+ D +KI GK K ++GH+ V + S ++ S
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVAS 163
Query: 518 ASDDKTLKVWELSSGKCLKT 577
S D +++W +G+C++T
Sbjct: 164 GSLDHEVRLWNAKTGECIRT 183
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 52.0 bits (119), Expect = 3e-07
Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 3/132 (2%)
Frame = +2
Query: 278 SNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI- 454
S+KS V + K T H AVSS+ S +G L S+S D+ KIW D K +I
Sbjct: 173 SSKSYVEVRRHK-KCTWVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIE 231
Query: 455 SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFNPQS 628
H I+ + S D + + S DK +KVW K + TL H + V +
Sbjct: 232 KAHDDAINAIVVSKDG-FVYTGSADKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDG 290
Query: 629 NLIVSSSFDESV 664
++ S + D S+
Sbjct: 291 KVLYSGACDRSI 302
Score = 49.2 bits (112), Expect = 2e-06
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY-DGKFEK-------TISGH 463
++L TL H AV+++ S +G+ L S + D+ I +W +G E+ + GH
Sbjct: 268 HSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGH 327
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVW-----ELSSGKCLKTLKGHSNYV 601
+ I +A +SD L++S S DK+L+VW E CL L+GH+ V
Sbjct: 328 RKAIMCLAVASD--LVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPV 376
Score = 31.9 bits (69), Expect = 0.39
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------TISGHKMGISDV 484
L GH KA+ + + + + S SADK +++W G EK + GH + +
Sbjct: 324 LRGHRKAIMCLAVA--SDLVLSGSADKSLRVWRR--GLMEKEGYSCLAVLEGHTKPVKSL 379
Query: 485 AWS---SDSR-----LIVSASDDKTLKVWEL 553
A S SDS ++ S S D +LKVW L
Sbjct: 380 AVSVSDSDSNSDYSCMVYSGSLDLSLKVWNL 410
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGA---YDG--------KFEKTISGHKMGIS 478
GH ++V+ + FS + L S S D I++W +D +E + H M ++
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVT 177
Query: 479 DVA--WSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
D+ + + +I+S+S+D+T KVW LS GK LK +
Sbjct: 178 DIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNI 213
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/65 (32%), Positives = 35/65 (53%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
I +A +++ +V + +WE+++GK LK GH V C F+ +L+VS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 653 DESVR 667
D S+R
Sbjct: 141 DGSIR 145
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
+ ++ + G +L I +W GK K GH ++ + +S D L+VS S
Sbjct: 81 IKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQ 140
Query: 527 DKTLKVWEL 553
D +++VW L
Sbjct: 141 DGSIRVWSL 149
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/44 (29%), Positives = 27/44 (61%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
++S I+ +A+ +D L++S S+D + VW+ S + ++TL
Sbjct: 258 SVSEKGKAITCLAYCADGNLLISGSEDGVVCVWDPKSLRHVRTL 301
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLK 583
+++ S D+T K+W++ SGK L T K
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFK 91
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 511
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 512 VSASDDKTLKVWELSSGKCLKT 577
++ S DKT K+W++ + LKT
Sbjct: 209 LTGSLDKTAKLWDMRTLTLLKT 230
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/72 (25%), Positives = 43/72 (59%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 632 LIVSSSFDESVR 667
+++ S D++ +
Sbjct: 66 RLITGSADQTAK 77
Score = 34.7 bits (76), Expect = 0.056
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
K I+ W ++ IVS +DK +++W+ +GK LK
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLK 583
+++ S D+T K+W++ SGK L T K
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFK 91
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 511
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 512 VSASDDKTLKVWELSSGKCLKT 577
++ S DKT K+W++ + LKT
Sbjct: 209 LTGSLDKTAKLWDMRTLTLLKT 230
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/72 (25%), Positives = 43/72 (59%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 632 LIVSSSFDESVR 667
+++ S D++ +
Sbjct: 66 RLITGSADQTAK 77
Score = 34.7 bits (76), Expect = 0.056
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
K I+ W ++ IVS +DK +++W+ +GK LK
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/86 (30%), Positives = 47/86 (54%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
+ GH + ++ ++++ G+ L S + D +W A +G+ T GH + S DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLK 583
+++ S D+T K+W++ SGK L T K
Sbjct: 66 RLITGSADQTAKLWDVKSGKELFTFK 91
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSSDSRLI 511
K ++ + P + + S DK+I+IW A GK K GHK I+ + ++D
Sbjct: 149 KRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHF 208
Query: 512 VSASDDKTLKVWELSSGKCLKT 577
++ S DKT K+W++ + LKT
Sbjct: 209 LTGSLDKTAKLWDMRTLTLLKT 230
Score = 47.6 bits (108), Expect = 7e-06
Identities = 18/72 (25%), Positives = 43/72 (59%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN 631
+ GH+ ++ + ++ + L+ S + D T +W +G+ L T +GH+ V+CC+ + S+
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 632 LIVSSSFDESVR 667
+++ S D++ +
Sbjct: 66 RLITGSADQTAK 77
Score = 34.7 bits (76), Expect = 0.056
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
K I+ W ++ IVS +DK +++W+ +GK LK
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLK 184
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
T GH AV S + L + SAD+ K+W GK
Sbjct: 47 TYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGK 85
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 51.6 bits (118), Expect = 5e-07
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 8/120 (6%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDV 484
L GH K + +SP E +L S S D+ I +W +K ++ GH+ I+DV
Sbjct: 164 LVGHDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADV 223
Query: 485 AWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
+W + L SA +D L +W+ + + +K H V +FNP + +++++ +S
Sbjct: 224 SWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDS 283
Score = 42.3 bits (95), Expect = 3e-04
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 18/95 (18%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG--------------AYDGKFEKTIS- 457
++ H V V++ PN E LASS D+ + +W A DG E S
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSH 359
Query: 458 -GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELS 556
GHK ISD AW+ ++ +I S ++D +L+VW+++
Sbjct: 360 GGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 51.2 bits (117), Expect = 6e-07
Identities = 22/77 (28%), Positives = 41/77 (53%)
Frame = +2
Query: 437 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNF 616
K K++S H+ + D+ WS D ++S S D + +W+++ G + L H +YV +
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAW 103
Query: 617 NPQSNLIVSSSFDESVR 667
+P + + S S D + R
Sbjct: 104 DPLAKYVASLSSDRTCR 120
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/75 (28%), Positives = 38/75 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
+L+ H K V +++SP+ +L S S D IW G + + H + VAW +
Sbjct: 48 SLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLA 107
Query: 503 RLIVSASDDKTLKVW 547
+ + S S D+T +++
Sbjct: 108 KYVASLSSDRTCRIY 122
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGH-KMGISDVAWS 493
F +G + A++ V++S G ++S D I+++ K ++I + H K ++ ++
Sbjct: 168 FPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFT 227
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKG 586
D R ++S+ D T+K+WE+ SG+ +K G
Sbjct: 228 KDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Frame = +2
Query: 266 SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 445
S + SS P + K TL+ H V +FSP+G + A+ AD IK++ K +
Sbjct: 8 SVNHAKGSSKTIPKHESK-TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV--PKVK 64
Query: 446 KTISG-------------HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK- 583
+ ISG H I+D+ + S +++S++ D +K ++ S + K
Sbjct: 65 QMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKV 124
Query: 584 -GHSNYVFCCNFNPQSNLIVSSS 649
++ V +F+P +++ +
Sbjct: 125 FQDTHNVRSISFHPSGEFLLAGT 147
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/91 (27%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGH-KMGISDVAWS 493
F +G + A++ V++S G ++S D I+++ K ++I + H K ++ ++
Sbjct: 260 FPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFT 319
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTLKG 586
D R ++S+ D T+K+WE+ SG+ +K G
Sbjct: 320 KDQRFVLSSGKDSTVKLWEIGSGRMVKEYLG 350
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Frame = +2
Query: 254 SLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD 433
S+ S + SS P + K TL+ H V +FSP+G + A+ AD IK++
Sbjct: 96 SIDFSVNHAKGSSKTIPKHESK-TLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV-- 152
Query: 434 GKFEKTISG-------------HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
K ++ ISG H I+D+ + S +++S++ D +K ++ S +
Sbjct: 153 PKVKQMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKR 212
Query: 575 TLK--GHSNYVFCCNFNPQSNLIVSSS 649
K ++ V +F+P +++ +
Sbjct: 213 AFKVFQDTHNVRSISFHPSGEFLLAGT 239
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8
WD-40 repeats (PF00400) (2 weak)
Length = 1108
Score = 51.2 bits (117), Expect = 6e-07
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 7/115 (6%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIW---GAYDGKFEKTISGHKMGISDVAWSSDSR--L 508
+V+ V +SP+G ++ + LI+++ G D + I H ++D+A+++ +R
Sbjct: 409 SVTRVAWSPDGNFIGVAFTKHLIQLYAFSGPNDLRQHTEIDAHVGAVNDLAFANPNRQLC 468
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSSFDESVR 667
+++ DDK +KVW++S K T +GH Y C ++ I S++ D ++
Sbjct: 469 VITCGDDKLIKVWDVSGRKHF-TFEGHDAPVYSICPHYKENIQFIFSTAIDGKIK 522
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Frame = +2
Query: 218 HGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWLASS 394
+ P +LS +S SA S + + T A + + F P + +A
Sbjct: 821 NAAPCIALSKNDSYVMSAAGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIG 880
Query: 395 SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
D I I+ + + + GH+ I+ +A+S+ ++VS+ D + W + + + K
Sbjct: 881 MEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRK 940
Query: 575 TL 580
++
Sbjct: 941 SV 942
Score = 32.3 bits (70), Expect = 0.30
Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSA 520
A + S N ++ S++ K + ++ K T + +A+ D+ +I
Sbjct: 822 AAPCIALSKNDSYVMSAAGGK-VSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIG 880
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+D T+ ++ + + LKGH + F+ N++VSS D +
Sbjct: 881 MEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQI 928
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 51.2 bits (117), Expect = 6e-07
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 7/115 (6%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG---KFEKTISGHKMGISDVAWSSDSR--L 508
+V+ V +SP+G L S LI ++ AY G + I H ++D+A++ ++
Sbjct: 411 SVTRVAWSPDGNLLGVSFTKHLIHVY-AYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMC 469
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHSN--YVFCCNFNPQSNLIVSSSFDESVR 667
+V+ DDK +KVW+L SGK L T +GH Y C + I S++ D ++
Sbjct: 470 VVTCGDDKLIKVWDL-SGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIK 523
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +2
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
D+ +I +D ++ ++ + + LKGH ++ F+ N++VSS D
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGAD 936
Score = 28.3 bits (60), Expect = 4.9
Identities = 28/126 (22%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISD 481
+K L GH K ++ + FS L SS AD + W A + +K+ + K + D
Sbjct: 907 VKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQLPPGKAPVGD 966
Query: 482 --VAWSSDSRLIVSASDDKTLKVWELSSGKCLK---TLKGHSNYVFCCNFNPQSNLIVSS 646
V + +D ++ + S + L +++ S +C+ + S+ + +++ S L+ +S
Sbjct: 967 TRVQFHND-QIQLLVSHETQLAIYDASKMECIHKWVPQEALSSPITSASYSCNSQLVYAS 1025
Query: 647 SFDESV 664
D ++
Sbjct: 1026 FADGNI 1031
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNP-QSN 631
GH I D++WS + ++S+S D+T+++W + SS +C++ H ++V C FNP N
Sbjct: 361 GHTGEILDLSWS-EKGFLLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDN 418
Query: 632 LIVSSSFDESVR 667
+S S D VR
Sbjct: 419 YFISGSIDGKVR 430
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/31 (32%), Positives = 22/31 (70%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+ H ++ +KFS +G++LAS+ D ++++W
Sbjct: 254 SAHDGSIVVMKFSHDGKYLASAGEDCVVRVW 284
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 380 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL-IVSASDDKTLKVWELS 556
+LASS D ++K+W G+ H+ V +S + S SDD ++K+W ++
Sbjct: 768 YLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNIN 827
Query: 557 SGKCLKTLKGHSNYVFCCNFNPQSNLIVS 643
CL T++ +N V C F+PQS+ +++
Sbjct: 828 ERNCLGTIRNIAN-VCCVQFSPQSSHLLA 855
Score = 36.3 bits (80), Expect = 0.018
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Frame = +2
Query: 347 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISDVAWSSDSRLI 511
V V+FSP + LA S+D + + YD + +T +SGH +S A D+ +
Sbjct: 841 VCCVQFSPQSSHLLAFGSSD--FRTY-CYDLRNLRTPWCILSGHNKAVS-YAKFLDNETL 896
Query: 512 VSASDDKTLKVWE--------LSSGKCLKTLKGHSN 595
V+AS D TLK+W+ LS+ C T GH+N
Sbjct: 897 VTASTDNTLKLWDLKKTTHGGLSTNACSLTFGGHTN 932
Score = 34.3 bits (75), Expect = 0.074
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
L+GH KAVS KF N E L ++S D +K+W
Sbjct: 878 LSGHNKAVSYAKFLDN-ETLVTASTDNTLKLW 908
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWEL 553
+S V W S ++VSAS + ++KV +L
Sbjct: 990 VSSVCWRKRSNMVVSASSNGSIKVLQL 1016
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 49.6 bits (113), Expect = 2e-06
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Frame = +2
Query: 272 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAY--DGKF 442
P+ + P+ + +L GHTKAV+++ +S + LAS+ D + +W + D K
Sbjct: 139 PKGSSLQTEMPS-RMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKK 197
Query: 443 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
+ H + DV WS ++S D T +++++ G ++ K V F+P
Sbjct: 198 VRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFK-EDEVVGVVKFHP 256
Query: 623 QS-NLIVSSSFDESVR 667
+ N+ +S S+R
Sbjct: 257 DNCNVFLSGGSKGSLR 272
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +2
Query: 461 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 634
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 635 IVSSSFDESV 664
++S SFD++V
Sbjct: 292 LLSGSFDQTV 301
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPN-GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RL 508
HT++V + ++ LAS+SADK +K+W G + T+ H + VAW+ + +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 509 IVSASDDKTL 538
++S S D+T+
Sbjct: 292 LLSGSFDQTV 301
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/68 (27%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Frame = +2
Query: 449 TISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCNFN 619
TI+GH + V+++ S L+ + S D+T+K+W+LS+ + C+ T ++ +F F+
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFS 423
Query: 620 PQSNLIVS 643
P + +++
Sbjct: 424 PDNPFLLA 431
Score = 35.5 bits (78), Expect = 0.032
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +2
Query: 284 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISG 460
++S++ FT+ GH +A +SV ++ + LA+ S D+ +K+W + + I+
Sbjct: 351 QASISASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE-PSCIAT 409
Query: 461 HKM---GISDVAWSSDSRLIVSASDDK-TLKVWELSS 559
H G+ +A+S D+ +++ LK+W+ S
Sbjct: 410 HNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLWDTLS 446
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = +2
Query: 332 GHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
GH++ V + +SP +G +L S+S D + G + T GHK + +++
Sbjct: 14 GHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNA 73
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
SAS D + K+W+ +G L + + H + V C F+ + +++ F++ +R
Sbjct: 74 LRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDTKYLITGGFEKILR 127
Score = 41.1 bits (92), Expect = 6e-04
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GH AV S N AS+SAD K+W A G + HK + A+S D+
Sbjct: 56 TFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSQDT 114
Query: 503 RLIVSASDDKTLKVWELS 556
+ +++ +K L+V++L+
Sbjct: 115 KYLITGGFEKILRVFDLN 132
Score = 35.5 bits (78), Expect = 0.032
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSAS 523
V+S + S +G ++ ++ +K W A K+ I + S V+
Sbjct: 190 VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYD-MPCNIESASLEPKSGNKFVAGG 247
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+D +++++ +GK + KGH V C F P S S D ++R
Sbjct: 248 EDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIR 295
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
GH V V+F+P GE AS S D I+IW
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAW-SSDSRL 508
H V + FS + ++L + +K+++++ T G I + W D +
Sbjct: 101 HKHIVRACAFSQDTKYLITGGFEKILRVFDLNRLDAPPTEIDKSPGSIRTLTWLHGDQTI 160
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHS 592
+ S +D +++W++ SGK ++TL+ S
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKS 188
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/69 (20%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +2
Query: 347 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
+ S P +G + D ++++ + GK GH + V ++ S S
Sbjct: 230 IESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGS 289
Query: 524 DDKTLKVWE 550
+D T+++W+
Sbjct: 290 EDGTIRIWQ 298
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 48.8 bits (111), Expect = 3e-06
Identities = 23/70 (32%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +2
Query: 461 HKMGISDVAWSSDSR-LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NL 634
H + +AW+ + R ++ SAS DK +KVW++++G C T++ H+ V +N + +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 635 IVSSSFDESV 664
++S SFD++V
Sbjct: 324 LLSGSFDQTV 333
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Frame = +2
Query: 227 PSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPN-GEWLASSSAD 403
P L G + S + KS KP KF HT++V + ++ LAS+SAD
Sbjct: 234 PCIQLGGIEEMIVS--KKKKSKKQKP----KFKEGSHTESVLGLAWNKEFRNILASASAD 287
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSASDDKTL 538
K +K+W G + T+ H + VAW+ + +++S S D+T+
Sbjct: 288 KKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 35.1 bits (77), Expect = 0.042
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 5/61 (8%)
Frame = +2
Query: 449 TISGHKM--GISDVAWS-SDSRLIVSASDDKTLKVWELSSGK--CLKTLKGHSNYVFCCN 613
TI H G+S ++++ S L+ + S DK++K+W+LS+ + C+ T + ++ VF +
Sbjct: 397 TIQAHAQDRGVSSISYNISTPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSIS 456
Query: 614 F 616
F
Sbjct: 457 F 457
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 469
K T+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
+ +++ SAS D + K+W+ +G L + + H + V C F+ + +++
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGG 121
Query: 650 FDESVR 667
F++ +R
Sbjct: 122 FEKILR 127
Score = 34.3 bits (75), Expect = 0.074
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSAS 523
V+S + S +G ++ ++ +K W A K+ I + S V+
Sbjct: 190 VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYD-MPCNIESASLEPKSGEKFVAGG 247
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+D ++V++ +G+ + KGH V C F P S S D ++R
Sbjct: 248 EDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIR 295
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAW-SSDSRL 508
H V + FS + + L + +K+++++ T G I + W SD +
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHS 592
+ S +D +++W++ SGK ++TL+ S
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKS 188
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 347 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
+ S P +GE + D ++++ Y G+ GH + V ++ S S
Sbjct: 230 IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGS 289
Query: 524 DDKTLKVWE 550
+D T+++W+
Sbjct: 290 EDGTIRIWQ 298
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Frame = +2
Query: 299 KPNYTLKFTLAGHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKM 469
K T+ GH++ V + +SP +G +L S+S D + G + T GHK
Sbjct: 3 KKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKG 62
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
+ +++ SAS D + K+W+ +G L + + H + V C F+ + +++
Sbjct: 63 AVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKSLLTGG 121
Query: 650 FDESVR 667
F++ +R
Sbjct: 122 FEKILR 127
Score = 34.3 bits (75), Expect = 0.074
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSAS 523
V+S + S +G ++ ++ +K W A K+ I + S V+
Sbjct: 190 VTSAEVSQDGRYITTADGST-VKFWDANHFGLVKSYD-MPCNIESASLEPKSGEKFVAGG 247
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+D ++V++ +G+ + KGH V C F P S S D ++R
Sbjct: 248 EDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIR 295
Score = 31.9 bits (69), Expect = 0.39
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG-ISDVAW-SSDSRL 508
H V + FS + + L + +K+++++ T G I + W SD +
Sbjct: 101 HKHIVRACAFSEDTKSLLTGGFEKILRVFDMNRLDAPPTEVDKSPGSIRTLTWLHSDQTI 160
Query: 509 IVSASDDKTLKVWELSSGKCLKTLKGHS 592
+ S +D +++W++ SGK ++TL+ S
Sbjct: 161 LSSCTDIGGVRLWDVRSGKIVQTLETKS 188
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 347 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
+ S P +GE + D ++++ Y G+ GH + V ++ S S
Sbjct: 230 IESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGS 289
Query: 524 DDKTLKVWE 550
+D T+++W+
Sbjct: 290 EDGTIRIWQ 298
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
GH V V+F+P G AS S D I+IW
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 48.8 bits (111), Expect = 3e-06
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Frame = +2
Query: 230 SASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKL 409
S S+ G +S S +S + + + H AV+ +K + +G +L S+ +D
Sbjct: 276 SQSVKGSSSAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSR 335
Query: 410 IKIWGAYDGK-----FEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
I++W G+ FE GI +SD +V KT+K + + SG+
Sbjct: 336 IRLWDIESGRNTLVNFETGRIQTNKGIQ--LDTSDDPALVFVPCMKTVKAFGMWSGRTTL 393
Query: 575 TLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
L+GH V C FN + +S D +
Sbjct: 394 MLRGHYESVNTCCFNSNDQELYTSGSDRQI 423
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
F + G + + + +A+ + D +++ G F T+SGH+ G+ V WS+
Sbjct: 142 FKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTS 201
Query: 500 SR-LIVSASDDKTLKVWELSSGKCLKTL 580
S ++ + D ++ W++ C + L
Sbjct: 202 SEWVLYTGGCDGAIRFWDIRRAGCFRVL 229
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 455 SGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSSGKCLKTLK 583
+GHK IS W D+ L ++ S D LKVW+ ++ + + K
Sbjct: 100 NGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFK 143
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = +2
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
K +K +G + G+ + GH ++ ++S+ + + ++ D+ + VW
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
L GH ++V++ F+ N + L +S +D+ I +W
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGSDRQILVW 426
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 48.4 bits (110), Expect = 4e-06
Identities = 33/91 (36%), Positives = 44/91 (48%)
Frame = +2
Query: 248 PNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA 427
P SL P S K PN + GHT AV+S+ +GEW+AS S D +++W
Sbjct: 395 PESLKPKLP-SRKDLRPYPN-SCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEV 452
Query: 428 YDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
G+ K + I VAW+ SRL V A
Sbjct: 453 ETGRCLK-VWQFDEAIMCVAWNPLSRLPVLA 482
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 458 GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLI 637
GH ++ ++ S I S S D ++++WE+ +G+CLK + + C +NP S L
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQ-FDEAIMCVAWNPLSRLP 479
Query: 638 V 640
V
Sbjct: 480 V 480
Score = 34.3 bits (75), Expect = 0.074
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 13/139 (9%)
Frame = +2
Query: 290 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD--GKFEKTISGH 463
++ KP K G + +SS+ P G+ L S + + W D K KT+ H
Sbjct: 613 NLLKPGEATKKLETG-LREISSMAIHPGGDNLIVGSKEGKM-CWFDMDLSSKPYKTLKNH 670
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVW------ELSSGKC---LKTLKGHSNY--VFCC 610
I++VA L S S+D T V+ +L+ L+ L+GHS+ V C
Sbjct: 671 PKDITNVAVHRSYPLFASCSEDSTAYVFHGMVYNDLNQNPLIVPLEILRGHSSKGGVLDC 730
Query: 611 NFNPQSNLIVSSSFDESVR 667
F+P+ + ++ D ++
Sbjct: 731 KFHPRQPWLFTAGADSIIK 749
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +2
Query: 326 LAGHTK--AVSSVKFSPNGEWLASSSADKLIKIW 421
L GH+ V KF P WL ++ AD +IK++
Sbjct: 718 LRGHSSKGGVLDCKFHPRQPWLFTAGADSIIKLY 751
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/78 (24%), Positives = 39/78 (50%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
++++ P + +++ D W GK + T GH + V S + I++ S+
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 527 DKTLKVWELSSGKCLKTL 580
D T ++W+ +GKC+K +
Sbjct: 222 DGTARIWDCKTGKCVKVI 239
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH----KMGISD 481
+K T GH+ + +V + + + S D +IW GK K I ++ +S
Sbjct: 193 IKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQDKKSRLRVSS 252
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
+A +V K L +W L + +C++T+
Sbjct: 253 MALDGSESWLV-CGQGKNLALWNLPASECVQTI 284
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
I+ ++ S + +A+ D W++ SGK T KGHS+Y+ ++ I++ S
Sbjct: 162 INAMSVDPQSGSVFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSE 221
Query: 653 DESVR 667
D + R
Sbjct: 222 DGTAR 226
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDES 661
A+S+D R + S D T+K+ + +G CLK L GH + F+P S ++ S S D
Sbjct: 113 AFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLE 172
Query: 662 VR 667
VR
Sbjct: 173 VR 174
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW-SSDS 502
L ++ + FS +G LAS+ D +KI G K ++GH+ V + S
Sbjct: 102 LGAPPRSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHS 161
Query: 503 RLIVSASDDKTLKVWELSSGKCLKT 577
++ S S D +++W ++ +C+++
Sbjct: 162 EIVASGSLDLEVRLWNTTTSECIRS 186
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Frame = +2
Query: 332 GHTKAVSSVKFSP---NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
GH++ V V +SP +G +L S+S D + G + T GHK + + ++
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
SAS D T K+W +G L + + H + V C F+ ++ +++ ++ +R
Sbjct: 69 IRAASASADFTAKIWNALTGDELHSFE-HKHIVRACAFSEDTHRLLTGGMEKILR 122
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/78 (33%), Positives = 39/78 (50%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GH AV S N AS+SAD KIW A G E HK + A+S D+
Sbjct: 51 TFEGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGD-ELHSFEHKHIVRACAFSEDT 109
Query: 503 RLIVSASDDKTLKVWELS 556
+++ +K L++++L+
Sbjct: 110 HRLLTGGMEKILRIFDLN 127
Score = 37.1 bits (82), Expect = 0.010
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDGKFEKTISGH-KMGISDVAWSSDS 502
GH V V+++P GE S S D ++IW G+ + E +SGH K+ +V ++S
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSGHVKLVAEEVVRKAES 322
Query: 503 -RLIVSASDDK 532
R+ A++ K
Sbjct: 323 LRISEKAAEAK 333
Score = 30.7 bits (66), Expect = 0.91
Identities = 22/107 (20%), Positives = 43/107 (40%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V+S + S +G ++ ++ +K W A + K+ S ++ +
Sbjct: 185 VTSAEVSQDGRYITTADGSS-VKFWDAKNFGLLKSYDMPCNVESASLEPKHGNTFIAGGE 243
Query: 527 DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D + ++ +G+ + KGH V C + P S S D +VR
Sbjct: 244 DMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVR 290
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 8/120 (6%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTIS------GHKMGISDV 484
L GH + + +S E +L S S D+ I +W +K ++ GH+ I DV
Sbjct: 165 LMGHEQEGYGLAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDV 224
Query: 485 AWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
AW + + SA DD L +W+L + + +K H + +FNP + +++++ +S
Sbjct: 225 AWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDS 284
Score = 44.4 bits (100), Expect = 7e-05
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 18/95 (18%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWG--------------AYDGKFEKTIS- 457
L+ H V V++ PN E LASS D+ + +W A DG E S
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSH 360
Query: 458 -GHKMGISDVAWSSDSRLIVSA-SDDKTLKVWELS 556
GHK ISD AW+ D ++S+ ++D +L+VW+++
Sbjct: 361 GGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Frame = +2
Query: 380 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELS 556
+LAS+ D +++IW A G+ + H+ V +S SD VS SDD ++K+W ++
Sbjct: 780 YLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSIN 839
Query: 557 SGKCLKTLKGHSNYVFCCNFNPQSN-LIVSSSFDESV 664
+ L T+ +N V C F+ SN L+ S D V
Sbjct: 840 EKRSLGTIWSPAN-VCCVQFSSYSNHLLAFGSADYKV 875
Score = 46.4 bits (105), Expect = 2e-05
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
Frame = +2
Query: 347 VSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKT----ISGHKMGISDVAWSSDSRLI 511
V V+FS + LA SAD K++ YD ++ KT ++GH+ +S V + DS I
Sbjct: 853 VCCVQFSSYSNHLLAFGSAD--YKVY-CYDLRYVKTPWCTLAGHEKAVSYVKFM-DSETI 908
Query: 512 VSASDDKTLKVWE--------LSSGKCLKTLKGHSN 595
VSAS D +LK+W LS G C T KGH+N
Sbjct: 909 VSASTDNSLKLWNLNKTNSSGLSPGACSLTYKGHTN 944
Score = 39.9 bits (89), Expect = 0.001
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 10/124 (8%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--------KMGISD 481
L V S+ F P+ E +A++ K IKI+ ++ +++ H K +S
Sbjct: 712 LLNSASVVCSLSFDPDEEHIAAAGISKKIKIFD-FNAFMNESVGVHYPLVEMVNKSKLSC 770
Query: 482 VAWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSSSFD 655
V W+S + ++++D D +++W+ +G+ H + +F+P VS S D
Sbjct: 771 VCWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDD 830
Query: 656 ESVR 667
SV+
Sbjct: 831 CSVK 834
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
TLAGH KAVS VKF + E + S+S D +K+W
Sbjct: 889 TLAGHEKAVSYVKFM-DSETIVSASTDNSLKLW 920
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 47.6 bits (108), Expect = 7e-06
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI----SGHKMGISDVAWSSDSRLIV 514
V++ + +G+ +A D I+IW G + H I+ V +SSD R+++
Sbjct: 330 VTTCAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILL 389
Query: 515 SASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCN--FNPQSNLIVSSS 649
S S D +LKVW+L K LK +G NY N F+P +I++ +
Sbjct: 390 SRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGT 437
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/123 (21%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKMG------ISDVAW 490
GH ++ ++ P E + +SS D ++IW + + + K+ ++ AW
Sbjct: 276 GHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAW 335
Query: 491 SSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDE 658
D + I D ++++W L G + K H++ + F+ +++S SFD
Sbjct: 336 DRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDG 395
Query: 659 SVR 667
S++
Sbjct: 396 SLK 398
Score = 35.1 bits (77), Expect = 0.042
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 11/120 (9%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-KTISG--HKMGISDVAWSSDSR 505
HT ++SVKFS +G L S S D +K+W K K G + ++VA+S D +
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 506 LIV---SASDDKT----LKVWELSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSSSFDES 661
+I+ S D T L ++ + + ++ + ++ V C ++P+ N I ++S D+S
Sbjct: 432 IILTGTSVEKDSTTGGLLCFYDRTKLEIVQKVGISPTSSVVQCAWHPRLNQIFATSGDKS 491
Score = 31.5 bits (68), Expect = 0.52
Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 19/182 (10%)
Frame = +2
Query: 179 LGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSV 358
+GP P PAA + N + N+ + N + L GHTK VSS+
Sbjct: 134 IGPPPPPPAARDSDEDSDDDDDNDN-------EENRYQIPLSN---EIQLKGHTKIVSSL 183
Query: 359 KFSPNGEWLASSSADKLIKIWGAYDG------KFEKTISGHKMGISDVAWS--SDSRLIV 514
G + S S D ++++ + G F + + V+WS S L V
Sbjct: 184 AVDSAGARVLSGSYDYTVRMYD-FQGMNSRLQSFRQIEPSEGHQVRSVSWSPTSGQFLCV 242
Query: 515 SAS------DDKTLKVWELSSG----KCLKTLKGHSNYVFCCNFNPQS-NLIVSSSFDES 661
+ S D L + E G + LK KGH + C ++P++ +++SS D S
Sbjct: 243 TGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPRTKETVLTSSEDGS 302
Query: 662 VR 667
+R
Sbjct: 303 LR 304
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT V S+ ++P + S+S D + +W A + I + A+S +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 503 RLIVSASDDKTLKVWELSSG-------KCLKTLKGHSNYVFCCNFNPQSNL-IVSSSFDE 658
+ + D ++ LSS + L GH YV CC + P + +++SS D+
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 659 S 661
+
Sbjct: 180 T 180
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +2
Query: 329 AGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWSSDS 502
+GHT V SV S N W S S D ++W + +T GH+ ++ V + D
Sbjct: 201 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSN 595
+ SDD T +++++ +G L+ + H +
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 291
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 419 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 598
+GA D +T+ GH + + W+ + IVSAS D L VW + + +K +
Sbjct: 50 FGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW 109
Query: 599 VFCCNFNPQSNLIVSSSFD 655
V C F+P + D
Sbjct: 110 VMTCAFSPNGQSVACGGLD 128
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS+S D
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQD 86
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG----ISDVAW 490
T GH V++VKF P+G + S D +++ G + H G ++ +A+
Sbjct: 243 TFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF 302
Query: 491 SSDSRLIVSA-SDDKTLKVWELSSGK 565
S RL+ + + + T VW+ G+
Sbjct: 303 SVSGRLLFAGYASNNTCYVWDTLLGE 328
Score = 32.3 bits (70), Expect = 0.30
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAY-----DGKF--EKTISGHKMGISDVAW--SSD 499
V + FSPNG+ +A D + I+ DG + ++GH+ +S + + D
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 169
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKT-------LKGHSNYVFCCNFNPQS-NLIVSSSFD 655
+ LI S S D+T +W++++G LKT GH+ V + + + N +S S D
Sbjct: 170 AHLITS-SGDQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCD 226
Query: 656 ESVR 667
+ R
Sbjct: 227 STAR 230
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT V S+ ++P + S+S D + +W A + I + A+S +
Sbjct: 60 TLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNG 119
Query: 503 RLIVSASDDKTLKVWELSSG-------KCLKTLKGHSNYVFCCNFNPQSNL-IVSSSFDE 658
+ + D ++ LSS + L GH YV CC + P + +++SS D+
Sbjct: 120 QSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQ 179
Query: 659 S 661
+
Sbjct: 180 T 180
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +2
Query: 329 AGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWSSDS 502
+GHT V SV S N W S S D ++W + +T GH+ ++ V + D
Sbjct: 201 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 260
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSN 595
+ SDD T +++++ +G L+ + H +
Sbjct: 261 YRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 291
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/79 (27%), Positives = 35/79 (44%)
Frame = +2
Query: 419 WGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 598
+GA D +T+ GH + + W+ + IVSAS D L VW + + +K +
Sbjct: 50 FGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW 109
Query: 599 VFCCNFNPQSNLIVSSSFD 655
V C F+P + D
Sbjct: 110 VMTCAFSPNGQSVACGGLD 128
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG----ISDVAW 490
T GH V++VKF P+G + S D +++ G + H G ++ +A+
Sbjct: 243 TFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF 302
Query: 491 SSDSRLIVSA-SDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSSSFD 655
S RL+ + + + T VW+ G+ + L H N + C + + + + S+D
Sbjct: 303 SVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWD 362
Query: 656 ESVR 667
+++
Sbjct: 363 SNLK 366
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
SA+ +T + + C +TL+GH+ V+ ++ P+ N IVS+S D
Sbjct: 40 SAAQGRTRVSFGATDLVCCRTLQGHTGKVYSLDWTPERNRIVSASQD 86
Score = 32.3 bits (70), Expect = 0.30
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAY-----DGKF--EKTISGHKMGISDVAW--SSD 499
V + FSPNG+ +A D + I+ DG + ++GH+ +S + + D
Sbjct: 110 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 169
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKT-------LKGHSNYVFCCNFNPQS-NLIVSSSFD 655
+ LI S S D+T +W++++G LKT GH+ V + + + N +S S D
Sbjct: 170 AHLITS-SGDQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCD 226
Query: 656 ESVR 667
+ R
Sbjct: 227 STAR 230
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/86 (24%), Positives = 46/86 (53%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
A++S+ FS +G +LA+ D ++I+ K + + + AWS D + +++
Sbjct: 305 AINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGG 364
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYV 601
+D ++VW + K + +GH+++V
Sbjct: 365 EDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS 496
+S +G++L + D L+++W D K GH +S VA+ S
Sbjct: 353 WSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDS 397
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 499
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES- 324
Query: 500 SRLIVSASDDKTLKVWE---LSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSSSFDESV 664
S LI + D L+VW+ + + HS+++ C ++ S ++S+S+D +
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKI 383
Score = 35.9 bits (79), Expect = 0.024
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW--SSDSRL 508
H VS+V S + ++ + D L ++W + G + GH IS VA S+D+
Sbjct: 109 HDDWVSAVNGS-SPRFILTGCYDGLGRVWSSA-GSCSHILEGHSGAISSVALVNSNDAET 166
Query: 509 IV--SASDDKTLKVWELSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ +AS D+TL++++ + + K L+GH V + N++ SSS+D
Sbjct: 167 VTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWD 226
Score = 34.7 bits (76), Expect = 0.056
Identities = 32/114 (28%), Positives = 51/114 (44%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH +V SV +G + SSS D I +W E T G + + ++
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN----ESTSEGESVSVKKRKGNN--- 253
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
A + + S G+ + +L GH+ V + P+ ++I SSS+D SVR
Sbjct: 254 ---QAEESQ-------SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVR 296
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGE----WLASSSADKLIKIWG-----AYDGKFE----KTISGHK 466
L GH+ A+SSV + + +A++S D+ ++++ + D + K + GHK
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 467 MGISDVAWSSDSRLIVSASDDKTLKVW 547
+ V+ ++ S+S D T+ +W
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLW 232
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 46.8 bits (106), Expect = 1e-05
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSD 499
+L GHT+ VSSV + P + + SSS D ++ W GK + G + DV S
Sbjct: 267 SLVGHTQCVSSVVW-PEHDVIYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVGGES- 324
Query: 500 SRLIVSASDDKTLKVWE---LSSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSSSFDESV 664
S LI + D L+VW+ + + HS+++ C ++ S ++S+S+D +
Sbjct: 325 SALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKI 383
Score = 35.9 bits (79), Expect = 0.024
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW--SSDSRL 508
H VS+V S + ++ + D L ++W + G + GH IS VA S+D+
Sbjct: 109 HDDWVSAVNGS-SPRFILTGCYDGLGRVWSSA-GSCSHILEGHSGAISSVALVNSNDAET 166
Query: 509 IV--SASDDKTLKVWELSSGKCL---------KTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ +AS D+TL++++ + + K L+GH V + N++ SSS+D
Sbjct: 167 VTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWD 226
Score = 34.7 bits (76), Expect = 0.056
Identities = 32/114 (28%), Positives = 51/114 (44%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH +V SV +G + SSS D I +W E T G + + ++
Sbjct: 201 LRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTN----ESTSEGESVSVKKRKGNN--- 253
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
A + + S G+ + +L GH+ V + P+ ++I SSS+D SVR
Sbjct: 254 ---QAEESQ-------SEGEAVTSLVGHTQCVSSVVW-PEHDVIYSSSWDHSVR 296
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTI---SGHKMGISDVAWSSDSRL-IVSASDDKTLKVWE 550
+A+ +D ++++W + S H IS W S ++SAS D + +W+
Sbjct: 328 IAAGGSDPILRVWDPRKPGTSAPVFQFSSHSSWISACKWHKSSWFHLLSASYDGKIMLWD 387
Query: 551 LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
L + L + H++ V ++ + +VS D ++R
Sbjct: 388 LRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLR 425
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGE----WLASSSADKLIKIWG-----AYDGKFE----KTISGHK 466
L GH+ A+SSV + + +A++S D+ ++++ + D + K + GHK
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 467 MGISDVAWSSDSRLIVSASDDKTLKVW 547
+ V+ ++ S+S D T+ +W
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLW 232
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 46.8 bits (106), Expect = 1e-05
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Frame = +2
Query: 209 HQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNG-EWL 385
H T G S S S +S Q+ S+K+ P+ + GH V V F P+ +
Sbjct: 241 HITMAG-SDSKSPGSSFKQTGEGSDKTG--GPSVGPRGIYNGHKDTVEDVAFCPSSAQEF 297
Query: 386 ASSSADKLIKIWGAYDGKFE--KTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWE-- 550
S D + +W A G K H + V W+ D+ LI++ S D T++V++
Sbjct: 298 CSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPHDNNLILTGSADNTVRVFDRR 357
Query: 551 -LSS---GKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
L+S G + +GH V C ++P + + SS ++ +
Sbjct: 358 NLTSNGVGSPVYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGL 399
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 46.8 bits (106), Expect = 1e-05
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASS---SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
HT AV ++ +SP+ L +S +AD+ I+ W +I + ++AWS +
Sbjct: 376 HTAAVKAIAWSPHVHGLLASGGGTADRCIRFWNTTTNTHLSSIDTCSQ-VCNLAWSKNVN 434
Query: 506 LIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+VS + VW+ + + TL GH+ V +P IV+ + DE++R
Sbjct: 435 ELVSTHGYSQNQIIVWKYPTMSKIATLTGHTYRVLYLAVSPDGQTIVTGAGDETLR 490
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/69 (30%), Positives = 38/69 (55%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
G +V SV ++ G LA ++ ++IW A K +T+ GH++ + +AW S ++
Sbjct: 250 GAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWGSS--VL 307
Query: 512 VSASDDKTL 538
S S DK++
Sbjct: 308 SSGSRDKSI 316
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLI--KIWGAYDGKFEKTISGHKMGISDVAWSS 496
T+ GH V ++ + + L+S S DK I + + K ++GHK + + WS
Sbjct: 289 TMEGHRLRVGALAWGSSV--LSSGSRDKSILQRDIRCQEDHVSK-LAGHKSEVCGLKWSY 345
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSS 646
D+R + S +D L VW S + + H+ V ++P + +++S
Sbjct: 346 DNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLAS 395
Score = 32.3 bits (70), Expect = 0.30
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 430
TL GHT V + SP+G+ + + + D+ ++ W +
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 495
Score = 31.9 bits (69), Expect = 0.39
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 410 IKIWGAYDGKFEKTIS-GHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
+ +W A K K G + + V W+ + L V S K +++W+ S K +T++
Sbjct: 233 VYLWNACSSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGK-VQIWDASRCKRTRTME 291
Query: 584 GHSNYVFCCNFNPQSNLIVSSSFDESV 664
GH V + S+++ S S D+S+
Sbjct: 292 GHRLRVGALAWG--SSVLSSGSRDKSI 316
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
T++GH + +A S D + IV+ + D+TL+ W +
Sbjct: 460 TLTGHTYRVLYLAVSPDGQTIVTGAGDETLRFWNV 494
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Frame = +2
Query: 347 VSSVKFSP-NGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLIVSA 520
+ VK++P + ++A SAD I + + + SGHK +S V + S++ L SA
Sbjct: 508 ICCVKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNEL-ASA 566
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSN 595
S D TL++W++ ++T +GH+N
Sbjct: 567 STDSTLRLWDVKDNLPVRTFRGHTN 591
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 508
+GH KAVS VKF N E LAS+S D +++W D +T GH + V + +S
Sbjct: 546 SGHKKAVSYVKFLSNNE-LASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEY 604
Query: 509 IVSASDDKTLKVW 547
+ S+ + V+
Sbjct: 605 LACGSETNEVYVY 617
Score = 34.3 bits (75), Expect = 0.074
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSS 559
+ASS + ++ +W + H+ V +S ++ ++VS SDD +KVW
Sbjct: 436 IASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQ 495
Query: 560 GKCLKTLKGHSNYVFCCNFNP-QSNLIVSSSFDESV 664
+ + +N + C +NP SN I S D +
Sbjct: 496 EASVINIDMKAN-ICCVKYNPGSSNYIAVGSADHHI 530
Score = 29.9 bits (64), Expect = 1.6
Identities = 23/116 (19%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWG-------AYDGKFEKTISGHKMGISDVAWSSDSR 505
VSS++F + E A++ + IK++ D + + +S ++W+ +
Sbjct: 374 VSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMSTRSKLSCLSWNKHEK 433
Query: 506 LIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNFN-PQSNLIVSSSFDESVR 667
+++SD + + VW++++ + L + H + +F+ + +++VS S D V+
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVK 489
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/98 (33%), Positives = 46/98 (46%)
Frame = +2
Query: 257 LSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 436
L++S N V + LK H AVS + + L S S DK +K+W D
Sbjct: 225 LTKSVNPKNYVEVRRRKNVLKIR---HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDS 281
Query: 437 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 550
K ++I H I+ VA D L+ + S D TLKVW+
Sbjct: 282 KCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWK 318
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
H +S ++ + + L+ S S DKTLKVW LS KCL++++ H + +
Sbjct: 248 HYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAI 294
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 46.0 bits (104), Expect = 2e-05
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Frame = +2
Query: 281 NKSSVAKPN-YTLKFTLAGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDGKFEKTI 454
N+ +V K ++L L+ H ++++ S NG L S +D I +W DG +
Sbjct: 239 NEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVWERDDGGDIVVV 298
Query: 455 S---GHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG--KCLKTLKGHSNYVFC 607
GH + +A SD ++ S S DKT+++W+ S+ CL L+GH V C
Sbjct: 299 GMLRGHTESVLCLAVVSD--ILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKC 352
Score = 44.8 bits (101), Expect = 5e-05
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK-FEKTISGHKMGISDVAWSSDSRLI 511
H AVS + S +G L S S D+ +KIW D K E + H I+ VA S + I
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGD-I 222
Query: 512 VSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ S D+ +KVW + + + +K + HS N N + S + S+
Sbjct: 223 YTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSL 274
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL-KGHSNYVFCCNFNPQSNLI 637
H +S +A S D L+ S S D+TLK+W + KCL++ H + + + ++
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 638 VSSSFDESVR 667
SS D+ ++
Sbjct: 224 TGSS-DQRIK 232
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +2
Query: 329 AGHTKAVSSVKFS-PNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWSSDS 502
+GHT V SV S N W S S D ++W + +T GH+ ++ V + D
Sbjct: 139 SGHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDG 198
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSN 595
+ SDD T +++++ +G L+ + H +
Sbjct: 199 YRFGTGSDDGTCRLYDIRTGHQLQVYQPHGD 229
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 9/124 (7%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG----ISDVAW 490
T GH V++VKF P+G + S D +++ G + H G ++ +A+
Sbjct: 181 TFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAF 240
Query: 491 SSDSRLIVSA-SDDKTLKVWELSSGKCLKTL----KGHSNYVFCCNFNPQSNLIVSSSFD 655
S RL+ + + + T VW+ G+ + L H N + C + + + + S+D
Sbjct: 241 SVSGRLLFAGYASNNTCYVWDTLLGEVVLDLGLQQDSHRNRISCLGLSADGSALCTGSWD 300
Query: 656 ESVR 667
+++
Sbjct: 301 SNLK 304
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V S+ ++P + S+S D + +W A + I + A+S + + +
Sbjct: 6 VYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGL 65
Query: 527 DKTLKVWELSSGK-------CLKTLKGHSNYVFCCNFNPQSNL-IVSSSFDES 661
D ++ LSS + L GH YV CC + P + +++SS D++
Sbjct: 66 DSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQT 118
Score = 32.3 bits (70), Expect = 0.30
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 17/124 (13%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAY-----DGKF--EKTISGHKMGISDVAW--SSD 499
V + FSPNG+ +A D + I+ DG + ++GH+ +S + + D
Sbjct: 48 VMTCAFSPNGQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNED 107
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKT-------LKGHSNYVFCCNFNPQS-NLIVSSSFD 655
+ LI S S D+T +W++++G LKT GH+ V + + + N +S S D
Sbjct: 108 AHLITS-SGDQTCILWDVTTG--LKTSVFGGEFQSGHTADVLSVSISGSNPNWFISGSCD 164
Query: 656 ESVR 667
+ R
Sbjct: 165 STAR 168
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT------ISGHKMGISDV 484
T GHT+ V +K+S +G+ LAS D ++ IW T + H + +
Sbjct: 261 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL 320
Query: 485 AWSS-DSRLIVS--ASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
AW + L+ + D+T+K W +G CL ++ S + L+ S F
Sbjct: 321 AWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFT 380
Query: 656 ES 661
++
Sbjct: 381 QN 382
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 290 SVAKPNYTLKFT--LAGHTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTI 454
SVA N T ++ L HT AV ++ + P LA+ D+ IK W + G ++
Sbjct: 296 SVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV 355
Query: 455 SGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
+ + WS + R ++S+ L +W+ S + L GH++ V +P
Sbjct: 356 DTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDG 414
Query: 629 NLIVSSSFDESVR 667
+ S++ DE++R
Sbjct: 415 CTVASAAGDETLR 427
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 401 DKLIKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
D + +W A G + TI K ++ + W+ D R + ++ +++W+ +S + L+
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 575 TLKG 586
TLKG
Sbjct: 219 TLKG 222
Score = 31.9 bits (69), Expect = 0.39
Identities = 20/107 (18%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSDSRLIVSAS 523
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++ L
Sbjct: 185 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHI-LTTGGM 243
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
D + ++T +GH+ V ++ + S D V
Sbjct: 244 DGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVV 290
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 430
P+ L GHT V + SP+G +AS++ D+ ++ W +
Sbjct: 390 PSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVF 432
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKMGISD 481
N L+ GH V S+ + N L + D LI +T GH +
Sbjct: 214 NRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCG 271
Query: 482 VAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNP-QSNLIV 640
+ WS + + S +D + +W+ S+ + L L+ H++ V + P Q+NL+
Sbjct: 272 LKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLA 331
Query: 641 S 643
+
Sbjct: 332 T 332
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
V S+ +S N L SS + +W ++GH + +A S D + SA
Sbjct: 361 VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASA 420
Query: 521 SDDKTLKVWEL 553
+ D+TL+ W +
Sbjct: 421 AGDETLRFWNV 431
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 9/122 (7%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT------ISGHKMGISDV 484
T GHT+ V +K+S +G+ LAS D ++ IW T + H + +
Sbjct: 251 TYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKAL 310
Query: 485 AWSS-DSRLIVS--ASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
AW + L+ + D+T+K W +G CL ++ S + L+ S F
Sbjct: 311 AWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSVDTGSQVCSLLWSKNERELLSSHGFT 370
Query: 656 ES 661
++
Sbjct: 371 QN 372
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Frame = +2
Query: 290 SVAKPNYTLKFT--LAGHTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTI 454
SVA N T ++ L HT AV ++ + P LA+ D+ IK W + G ++
Sbjct: 286 SVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGGGGGDRTIKFWNTHTGACLNSV 345
Query: 455 SGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
+ + WS + R ++S+ L +W+ S + L GH++ V +P
Sbjct: 346 DTGSQ-VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDG 404
Query: 629 NLIVSSSFDESVR 667
+ S++ DE++R
Sbjct: 405 CTVASAAGDETLR 417
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 401 DKLIKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLK 574
D + +W A G + TI K ++ + W+ D R + ++ +++W+ +S + L+
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 575 TLKG 586
TLKG
Sbjct: 209 TLKG 212
Score = 31.9 bits (69), Expect = 0.39
Identities = 20/107 (18%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAWSSDSRLIVSAS 523
V+S+ ++P+G +A + +++W + + +T+ GH+ + +AW++ L
Sbjct: 175 VTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVGSLAWNNHI-LTTGGM 233
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
D + ++T +GH+ V ++ + S D V
Sbjct: 234 DGLIINNDVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVV 280
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 430
P+ L GHT V + SP+G +AS++ D+ ++ W +
Sbjct: 380 PSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWNVF 422
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 8/121 (6%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEKTISGHKMGISD 481
N L+ GH V S+ + N L + D LI +T GH +
Sbjct: 204 NRQLRTLKGGHQSRVGSLAW--NNHILTTGGMDGLIINNDVRIRSPIVETYRGHTQEVCG 261
Query: 482 VAWSSDSRLIVSASDDKTLKVWEL------SSGKCLKTLKGHSNYVFCCNFNP-QSNLIV 640
+ WS + + S +D + +W+ S+ + L L+ H++ V + P Q+NL+
Sbjct: 262 LKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLA 321
Query: 641 S 643
+
Sbjct: 322 T 322
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
V S+ +S N L SS + +W ++GH + +A S D + SA
Sbjct: 351 VCSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASA 410
Query: 521 SDDKTLKVWEL 553
+ D+TL+ W +
Sbjct: 411 AGDETLRFWNV 421
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 46.0 bits (104), Expect = 2e-05
Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSA 520
+++ ++++S +G+ S+ DKL+KIW A + T+ K +S VA SSD + A
Sbjct: 64 ESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTVCSEKR-VSAVAISSDDSHVCYA 122
Query: 521 SDDKTLKVWEL---SSGKCLKTLKG------HSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ V EL + GK L + KG + + + F+P I+S+ D +R
Sbjct: 123 DKFGVVWVIELDGINDGKTLPSKKGALLLSHYCSIITSLEFSPDGRYILSADRDFKIR 180
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
K I + +S+ +L VSA DDK +K+W S +CL T+
Sbjct: 63 KESIRAIRYSTSGKLFVSAGDDKLVKIWSADSWRCLNTV 101
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 6/113 (5%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H AVSS+ L SSS D IK+W D K ++I H I+ V D L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVF 292
Query: 515 SASDDKTLKVWELS-SGKCLK-----TLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ S D T+KVW+ GK K L N V QS+++ S D
Sbjct: 293 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQSSIVYCGSSD 345
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/69 (26%), Positives = 38/69 (55%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H +S ++ + L+ S+S D T+KVW ++ KCL+++ H + + + +L+
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVF 292
Query: 641 SSSFDESVR 667
+ S D +V+
Sbjct: 293 TGSADGTVK 301
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELS 556
H+ + VA +I S S DK++KVW +S
Sbjct: 426 HQGAKASVAEGDRKWIIYSGSLDKSVKVWRVS 457
Score = 24.2 bits (50), Expect(2) = 1.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
L GH AV + + G L S SADK I +W
Sbjct: 363 LKGHKSAVLCLGIA--GNLLLSGSADKNICVW 392
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 45.2 bits (102), Expect = 4e-05
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 20/147 (13%)
Frame = +2
Query: 287 SSVAKPNYTLKFT-LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--- 454
S V +P T F+ + H ++V SV S + S+S D I W GK +K I
Sbjct: 143 SRVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPS 202
Query: 455 ----SGHKMGISD------------VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKG 586
H M + + +A SSD R + + D+ + +W++ + + ++ G
Sbjct: 203 DEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPG 262
Query: 587 HSNYVFCCNFNPQSNLIVSSSFDESVR 667
H N V C F ++ + S SFD +V+
Sbjct: 263 HRNTVSCLCFRYGTSELYSGSFDRTVK 289
Score = 44.0 bits (99), Expect = 9e-05
Identities = 20/89 (22%), Positives = 42/89 (47%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H++ ++ S +G +LA+ D+ + IW + + GH+ +S + + + +
Sbjct: 221 HSRESLALAVSSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELY 280
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYV 601
S S D+T+KVW + + GH +
Sbjct: 281 SGSFDRTVKVWNVEDKAFITENHGHQGEI 309
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK 466
GH VS + F L S S D+ +K+W D F GH+
Sbjct: 262 GHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFITENHGHQ 306
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSS 559
+ASS+ + ++++W + + H+ + + +SS D L+ S SDD ++K+W ++
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 560 GKCLKTLKGHSNYVFCC 610
G + T+K +N CC
Sbjct: 609 GVSIGTIKTKAN--ICC 623
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 338 TKA-VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSSDSRL 508
TKA + V+F S G LA SAD + + + K T+ GH +S V + DS
Sbjct: 617 TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSST 675
Query: 509 IVSASDDKTLKVWELS 556
+VS+S D TLK+W+LS
Sbjct: 676 LVSSSTDNTLKLWDLS 691
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA----YDGK---FEKTISGHKMGISDV 484
L + V ++ F +GE+ A++ +K IKI+ DG+ + + +S +
Sbjct: 480 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGI 539
Query: 485 AWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNF-NPQSNLIVSSSFDE 658
W+S + V++S+ + ++VW+++ + + +K H V+ ++ + L+ S S D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 659 SVR 667
SV+
Sbjct: 600 SVK 602
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELSS 559
+ASS+ + ++++W + + H+ + + +SS D L+ S SDD ++K+W ++
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 560 GKCLKTLKGHSNYVFCC 610
G + T+K +N CC
Sbjct: 609 GVSIGTIKTKAN--ICC 623
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Frame = +2
Query: 338 TKA-VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSSDSRL 508
TKA + V+F S G LA SAD + + + K T+ GH +S V + DS
Sbjct: 617 TKANICCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFV-DSST 675
Query: 509 IVSASDDKTLKVWELS 556
+VS+S D TLK+W+LS
Sbjct: 676 LVSSSTDNTLKLWDLS 691
Score = 38.3 bits (85), Expect = 0.005
Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGA----YDGK---FEKTISGHKMGISDV 484
L + V ++ F +GE+ A++ +K IKI+ DG+ + + +S +
Sbjct: 480 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGI 539
Query: 485 AWSSDSRLIVSASD-DKTLKVWELSSGKCLKTLKGHSNYVFCCNF-NPQSNLIVSSSFDE 658
W+S + V++S+ + ++VW+++ + + +K H V+ ++ + L+ S S D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 659 SVR 667
SV+
Sbjct: 600 SVK 602
Score = 31.5 bits (68), Expect = 0.52
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+ GH K VS V+F + L SSS D +K+W
Sbjct: 657 TMIGHHKTVSYVRF-VDSSTLVSSSTDNTLKLW 688
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 45.2 bits (102), Expect = 4e-05
Identities = 34/107 (31%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Frame = +2
Query: 257 LSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 436
L++S N V + LK H AVS + + + L S S DK +K+W D
Sbjct: 221 LTKSVNPRNYVEVRRRKNVLKIR---HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDS 277
Query: 437 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS-SGKCLK 574
K ++I H ++ V D L+ + S D TLKVW+ GK +K
Sbjct: 278 KCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVWKREVQGKEMK 323
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
H +S ++ + D L+ S S DKTLKVW LS KCL++++ H + V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAV 290
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--MGISDVAWSSDSRL 508
H AV + FSP G + S D+ ++I+ Y+G + I K + V +S D+
Sbjct: 278 HVSAVMDIDFSPTGREFVTGSYDRSVRIF-PYNGGHSREIYHTKRMQRVFCVKYSCDATY 336
Query: 509 IVSASDDKTLKVWELSSGKCL 571
++S SDD L++W+ + + L
Sbjct: 337 VISGSDDTNLRLWKAKASEQL 357
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +2
Query: 377 EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS-RLIVSASDDKTLKVWEL 553
E+ + +A KL KI+ F + GH+ G+S +A + + + I SAS D +++W++
Sbjct: 30 EYQRALTAAKLEKIFAR---PFVGAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDI 86
Query: 554 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
SS + + GH V + N++VS D +VR
Sbjct: 87 SSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVR 124
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 508
GH VS + +PN + + S+S D I++W + GH+ + + S+D +
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 113
Query: 509 IVSASDDKTLKVWEL 553
+VS D T+++W +
Sbjct: 114 LVSCGTDCTVRLWNV 128
Score = 36.7 bits (81), Expect = 0.014
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Frame = +2
Query: 338 TKAVSSVKFSPNG-EWLASSSADKLIKIWGA-YDGKFEKTISGHKMGISDVAWSSDSRL- 508
T +V SV+F+P LA+S++D+ I I+ K I K + +AW+ +
Sbjct: 193 TDSVISVRFNPGEPNLLATSASDRSITIYDLRLSSAARKIIMMTKT--NSIAWNPMEPMN 250
Query: 509 IVSASDDKTLKVWE---LSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ +A++D + ++ L KC+ K H + V +F+P V+ S+D SVR
Sbjct: 251 LTAANEDGSCYSFDGRKLDEAKCVH--KDHVSAVMDIDFSPTGREFVTGSYDRSVR 304
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 44.8 bits (101), Expect = 5e-05
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASS---SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
H AV ++ +SP+ L +S +AD+ I+ W + + + ++ WS +
Sbjct: 333 HAAAVKAIAWSPHHFGLLASGGGTADRCIRFWNTTTNTHLNCVDTNSQ-VCNLVWSKNVN 391
Query: 506 LIVSAS--DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+VS + VW+ + L TL GHS V +P IV+ + DE++R
Sbjct: 392 ELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLR 447
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
G + V SV ++ G LA ++ ++IW K +T+ GH++ + +AWSS ++
Sbjct: 207 GVDETVCSVGWALRGTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSS--VL 264
Query: 512 VSASDDKTLKVWELSSGK-CLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
S S DK++ ++ + + + LKGH + + ++ + + S D +
Sbjct: 265 SSGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKL 316
Score = 38.7 bits (86), Expect = 0.003
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 2/102 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLI--KIWGAYDGKFEKTISGHKMGISDVAWSS 496
T+ GH V ++ +S + L+S S DK I + + K + GHK I + WSS
Sbjct: 246 TMEGHRLRVGALAWSSSV--LSSGSRDKSILQRDIRTQEDHVSK-LKGHKSEICGLKWSS 302
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
D+R + S +D L VW S + + H+ V ++P
Sbjct: 303 DNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSP 344
Score = 31.1 bits (67), Expect = 0.69
Identities = 11/43 (25%), Positives = 23/43 (53%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 430
P + TL GH+ V + SP+G+ + + + D+ ++ W +
Sbjct: 410 PTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVF 452
Score = 30.7 bits (66), Expect = 0.91
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
T++GH + +A S D + IV+ + D+TL+ W +
Sbjct: 417 TLTGHSYRVLYLAVSPDGQTIVTGAGDETLRFWNV 451
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/138 (23%), Positives = 70/138 (50%), Gaps = 6/138 (4%)
Frame = +2
Query: 272 PQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG----- 436
P + K+ + + L AG V+++ + NG A +S+ ++ +W A
Sbjct: 190 PNAIKAFNVQTSQDLHLQAAGVVGQVNAMTIA-NGMLFAGTSSGSIL-VWKATTDSESDP 247
Query: 437 -KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCN 613
K+ ++ GH ++ ++ +++ S S DKT+K+W+L++ +C+ TLK H+ V +
Sbjct: 248 FKYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTV--TS 303
Query: 614 FNPQSNLIVSSSFDESVR 667
++SSS D +++
Sbjct: 304 LLCWDKCLISSSLDGTIK 321
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDV-AWSSD 499
+L GH+ V+ F+ G+ L S S DK IK+W + T+ H ++ + W
Sbjct: 253 SLEGHSGEVTC--FAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD-- 308
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKTLK 583
+ ++S+S D T+KVW S LK ++
Sbjct: 309 -KCLISSSLDGTIKVWAYSENGILKVVQ 335
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 419 WGAYDG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
W + G ++ GH + +A S + S S D TL+VW+ +SG+C+ ++
Sbjct: 115 WSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSI 169
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/52 (23%), Positives = 23/52 (44%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS 457
P + +L GH K + + + L S S D +++W G+ +I+
Sbjct: 119 PGLAMVASLEGHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQCVHSIN 170
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 9/111 (8%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKMG------ISDVAWSSD 499
AV+SVK++ +AS+ DK I +W +G+ T+ +G G +S +++S
Sbjct: 45 AVNSVKWNHTNLVVASTGEDKKISLWRK-NGQSLGTVPVTGKDGGDSAEECLSAISFSKK 103
Query: 500 -SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
SR I S + +K+W+L C+K LKGH++ + +N + + S S
Sbjct: 104 GSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE---KTISGHKMGISDVAWSS 496
L GHT ++ V ++ E LAS S + + G K +G + + D + SS
Sbjct: 131 LKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSS 190
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSS 646
L+V+A DD T+ +W+ ++G+ K LK HS F+P + I++S
Sbjct: 191 -RHLLVTAGDDGTVHLWD-TTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIAS 240
Score = 36.3 bits (80), Expect = 0.018
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +2
Query: 341 KAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 517
+ +S++ FS G ++ S +++KIW K + GH I+ V ++ + S
Sbjct: 93 ECLSAISFSKKGSRYICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLAS 152
Query: 518 ASDDKTLKVWELSSGKCLKTLKGHSNYVF-CCNFNPQS-NLIVSSSFDESV 664
S L V L+SG LK + V +++ S +L+V++ D +V
Sbjct: 153 VSVGGDLIVHNLASGARATELKDPNGQVLRLLDYSRSSRHLLVTAGDDGTV 203
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Frame = +2
Query: 443 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFN 619
+K + HK ++ V++++D +++S SDD+ + +W+ + L GH N +F F
Sbjct: 48 DKKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFM 107
Query: 620 PQSN--LIVSSSFDESVR 667
P S+ IV+S+ D+ VR
Sbjct: 108 PFSDDRTIVTSAADKQVR 125
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
F P E++ S S I IW DG+ + + + ++ + L+ S+ D +K
Sbjct: 318 FGPKCEYVVSGSDCGRIFIWRKKDGELLRAMEADRHVVNCIESHPHMPLMCSSGIDTDIK 377
Query: 542 VW 547
+W
Sbjct: 378 IW 379
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 44.4 bits (100), Expect = 7e-05
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 10/162 (6%)
Frame = +2
Query: 209 HQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSP-NGEWL 385
H T G + SG + + Q+ ++K+ P + GH V V FSP + +
Sbjct: 252 HITTIGTDSKSSG-SIIKQTGEGTDKNE--SPTVGPRGVYHGHEDTVEDVAFSPTSAQEF 308
Query: 386 ASSSADKLIKIWGAYDGK--FEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKVWELS 556
S D + +W A G K H + V W+ D LI++ S D T+++++
Sbjct: 309 CSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHDDNLILTGSADNTVRLFDRR 368
Query: 557 S------GKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
G + +GH V C ++P + + SS ++ +
Sbjct: 369 KLTANGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGL 410
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 44.0 bits (99), Expect = 9e-05
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Frame = +2
Query: 371 NGEWLASSSADKLIKIWGAYDG-----KFEKTISGHKMGISDVAWSSDSRLIVSASDDKT 535
NG A +S+ ++ +W A D K+ ++ GH G + ++ S S DKT
Sbjct: 276 NGMLFAGTSSGSIL-VWKATDSESDPFKYLTSLEGHHSG-EVTCFVVGGEVLYSGSVDKT 333
Query: 536 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+KVW+L++ +C TLK H V + ++SSS D +++
Sbjct: 334 IKVWDLNTLQCRMTLKQHIGTV--TSLLCWDKCLISSSLDGTIK 375
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 419 WGAYDG-KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
W + G + GHK I +A S + S S D TL +W+ +SG+C++++
Sbjct: 171 WSCFPGLAMVAALEGHKNDIKGIALPQGSDKLFSVSGDGTLLIWDCNSGQCVRSI 225
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
H IS +A S D RL+ S S DKT KVW +S +C++++ H + V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAV 256
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H AVS + + L S+S D+ IK+W D K ++I H ++ V S+ ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVF 263
Query: 515 SASDDKTLKVWE 550
S S D T+K W+
Sbjct: 264 SGSADGTVKAWK 275
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H +S ++ + + L+ SAS D+T+KVW ++ KCL+++ H + V ++ ++
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEA-IVF 263
Query: 641 SSSFDESVR 667
S S D +V+
Sbjct: 264 SGSADGTVK 272
Score = 31.5 bits (68), Expect = 0.52
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 12/89 (13%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS---GHKMGISDVAWSS 496
L GH AV ++ + G + S SADK I +W DG +S GH + +A +
Sbjct: 334 LKGHKLAVLCLEVA--GSLVFSGSADKTICVWKR-DGNIHTCLSVLTGHTGPVKCLAVEA 390
Query: 497 DSR---------LIVSASDDKTLKVWELS 556
D ++ S S DK++KVW +S
Sbjct: 391 DREASERRDKKWIVYSGSLDKSVKVWGVS 419
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/72 (30%), Positives = 41/72 (56%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV 514
H+ AVS + + + L S+S D+ +K+W +D K ++I H ++ V ++ L+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVF 191
Query: 515 SASDDKTLKVWE 550
+ S D T+KVW+
Sbjct: 192 TGSADGTVKVWK 203
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
H +S ++ + D L+ SAS D+T+KVW + KC++++K H + V + +L+
Sbjct: 134 HSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAV--NSVTTAESLVF 191
Query: 641 SSSFDESVR 667
+ S D +V+
Sbjct: 192 TGSADGTVK 200
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
F + G + + + +A+ + D +++ G F T+SGH+ G+ V WS+
Sbjct: 142 FKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTS 201
Query: 500 SR-LIVSASDDKTLKVWELSSGKCLKTL 580
S ++ + D ++ W++ C + L
Sbjct: 202 SEWVLYTGGCDGAIRFWDIRRAGCFRVL 229
Score = 41.9 bits (94), Expect = 4e-04
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Frame = +2
Query: 218 HGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSS 397
H G S S+ G +S S +S + + + H V+ +K + +G +L S+
Sbjct: 273 HTG-SQSVKGSSSEKPSVEKSRQKRIHPGMLSTLDRATAHYGVVTGLKATNDGMYLLSAG 331
Query: 398 ADKLIKIWGAYDGKFEKTISGHKMGI--SDVAW---SSDSRLIVSASDDKTLKVWELSSG 562
+ I++W G+ T+ + G +D A +SD +V KT+K + + SG
Sbjct: 332 SYSRIRLWDIESGR--NTLVNFETGRIQTDRAIQLDTSDDPALVFVPCMKTVKGFGMWSG 389
Query: 563 KCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ L+GH V C FN + +S D +
Sbjct: 390 RTTLMLRGHYESVNTCCFNSNDQELYTSGADRQI 423
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Frame = +2
Query: 332 GHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK----FEKTISGHKMGISDVAWSS 496
GH A+SS + P + + S D +K+W + F+ ++ +S +A S
Sbjct: 101 GHKYAISSAIWYPIDTGMFITGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSH 160
Query: 497 DSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSN-LIVSSSFDESVR 667
LI + +DD +++ +++SG TL GH + V ++ S ++ + D ++R
Sbjct: 161 T--LIAAGTDDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIR 216
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
L GH ++V++ F+ N + L +S AD+ I +W G E ++ ++ WS
Sbjct: 395 LRGHYESVNTCCFNSNDQELYTSGADRQIIVWSP-GGSVEDEMAQGEVAEDKDNWS 449
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/48 (20%), Positives = 26/48 (54%)
Frame = +2
Query: 404 KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
K +K +G + G+ + GH ++ ++S+ + + ++ D+ + VW
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVW 426
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS- 628
I+G + W + + ++ S S+DK +KVW++++GKC T++ H V +N +
Sbjct: 212 IAGQTLFFLTFNWENRN-IVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTP 270
Query: 629 NLIVSSSFDESV 664
+++S S D +V
Sbjct: 271 EVLLSGSRDRTV 282
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +2
Query: 371 NGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTL 538
N +AS S DK +K+W GK + T+ H+ + VAW++ +++S S D+T+
Sbjct: 226 NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTV 282
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 320 FTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIW 421
F + H VSS+ ++ + LA+ SAD+ +K+W
Sbjct: 339 FIIHAHDSEVSSISYNIHAPNLLATGSADESVKLW 373
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/89 (25%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM---GISDVAWSSDSRLIV 514
+++S+ FS +G LA+ D ++I +D +K + G K + +WS D + I+
Sbjct: 305 SINSIAFSNDGAHLATVGRDGYLRI---FDFLTQKLVCGGKSYYGALLCCSWSMDGKYIL 361
Query: 515 SASDDKTLKVWELSSGKCLKTLKGHSNYV 601
+ +D ++VW + K + +GH+++V
Sbjct: 362 TGGEDDLVQVWSMEDRKVVAWGEGHNSWV 390
Score = 31.9 bits (69), Expect = 0.39
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD 499
A+ +S +G+++ + D L+++W D K GH +S VA+ S+
Sbjct: 347 ALLCCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSN 398
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 463
TL GHTK VS V+F G + ++ D +K+W DG+ +T GH
Sbjct: 108 TLQGHTKTVSYVRFLDGGT-VVTAGTDGCLKLWSVEDGRVIRTYEGH 153
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Frame = +2
Query: 344 AVSSVKFSPNG-EWLASSSADK---LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
AV V+F P+G +A AD+ + I D T+ GH +S V + D +
Sbjct: 71 AVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPAL--TLQGHTKTVSYVRFL-DGGTV 127
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSN 595
V+A D LK+W + G+ ++T +GH N
Sbjct: 128 VTAGTDGCLKLWSVEDGRVIRTYEGHVN 155
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/90 (31%), Positives = 46/90 (51%)
Frame = +2
Query: 380 WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS 559
W + L + G K E + GH+ I+ +A S I S S D ++++W+ SS
Sbjct: 229 WKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTS--IFSGSWDMSVRIWDRSS 286
Query: 560 GKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
KC+KTL+ HS++V+ P + S+S
Sbjct: 287 MKCVKTLR-HSDWVW--GLAPHETTLASTS 313
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/80 (25%), Positives = 42/80 (52%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
TL GHT+AV +V + + + +S D ++++W +G + +G + A ++D+
Sbjct: 157 TLYGHTEAVRTVFLLASAKLVFTSGYDSIVRMWDMEEGL--SIAASKPLGCTIRALAADT 214
Query: 503 RLIVSASDDKTLKVWELSSG 562
+L+V+ D + W+ G
Sbjct: 215 KLLVAGGTDGFIHCWKSLDG 234
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +2
Query: 446 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNP 622
K + HK ++ V+++++ +++S SDD+ + +W+ G L GH+N VF F P
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
Query: 623 QSN--LIVSSSFDESVR 667
S+ IV+ + D VR
Sbjct: 113 FSDDRTIVTCAADGMVR 129
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 7/107 (6%)
Frame = +2
Query: 248 PNSLSQSAPQSNKSSVAKPN----YTLKFTLAGHT--KAVSSVKF-SPNGEWLASSSADK 406
P+S +P S S + P +++ GH + V V F P E++ S S
Sbjct: 297 PSSPISKSPVSKSESSSSPKDENEHSVSLVYKGHKNCETVKGVNFFGPRSEYVVSGSDCG 356
Query: 407 LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
I IW G+ + + + ++ + ++ S+ + +KVW
Sbjct: 357 RIFIWRKKGGELIRVMEADRHVVNCIEPHPHIPVLASSGIESDIKVW 403
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +2
Query: 335 HTKAVSSVKFSP-NGEWLASSSADKLIKIWG--AYDGKFEKT--ISGHKMGISDVAWSSD 499
HT V++V F+ +G + S S D L K+W + G+ + + GH G++ + D
Sbjct: 270 HTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGD 329
Query: 500 SRLIVSASDDKTLKVWEL 553
R +S D+T+K+W++
Sbjct: 330 GRYFISNGKDQTIKLWDI 347
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/57 (35%), Positives = 36/57 (63%)
Frame = +2
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
A S+ + I + S+D ++ +++L SG + LK HS+ V CN++P ++SSS+D
Sbjct: 408 AHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCNWHPYYPTLISSSWD 464
Score = 28.3 bits (60), Expect = 4.9
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L GH + V+ + +G + S+ D+ IK+W K + + + W D R
Sbjct: 314 LVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI--RKMSSSAPARHEVLRNYEW--DYR 369
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHS--NYVFCCNFNP 622
+ ++ + LK + + T KGHS + C F+P
Sbjct: 370 WMDYPTEARDLK---HPLDQSVSTYKGHSVLRTLIRCYFSP 407
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 8/72 (11%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWGAY---DGKFEKT-----ISGHKMGISDVAWSSDSRLIVSA 520
SPNG +LA+++ +K+W DG ++ + GHK ++ + +S +S I++A
Sbjct: 248 SPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITA 307
Query: 521 SDDKTLKVWELS 556
S D +++VW ++
Sbjct: 308 SKDGSIRVWNIN 319
Score = 36.3 bits (80), Expect = 0.018
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
+AS S I +W G+ + +++ A S + R + +A+ +KVWE+
Sbjct: 212 IASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIVYQ 271
Query: 563 KC--------LKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
K + LKGH + V F+P S I+++S D S+R
Sbjct: 272 KDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIR 314
Score = 33.9 bits (74), Expect = 0.098
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
L GH AV+ + FSPN E + ++S D I++W
Sbjct: 285 LKGHKSAVTWLCFSPNSEQIITASKDGSIRVW 316
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL--SSGKCLKTLK 583
T+ GH ++ + +SSD + + +A D ++V++L +S K K L+
Sbjct: 81 TLKGHGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSKSFKFLR 127
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +2
Query: 335 HTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
H+ VSS+ F N + SSS D LI++ F+ S + S +D + +
Sbjct: 262 HSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVEKSVFDLVYSTDEAIFSLSQRPNDEQSL 321
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
D VW+L +GK + + H + +FNPQ+ ++++S
Sbjct: 322 YFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATS 367
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 443 EKTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWEL---SSGKCLKTLKGHSNYVFCC 610
++ H+ + DVAW L S DD+ L +W+L S+ K ++++ HS V C
Sbjct: 220 QQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCL 279
Query: 611 NFNPQSNLIVSS-SFDESVR 667
FNP + +V++ S D++V+
Sbjct: 280 AFNPFNEWVVATGSTDKTVK 299
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWS- 493
++ H+ V+ + F+P EW +A+ S DK +K++ T HK + V W+
Sbjct: 268 SVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLSTALHTFDSHKEEVFQVGWNP 327
Query: 494 SDSRLIVSASDDKTLKVWELS 556
+ ++ S + L VW+LS
Sbjct: 328 KNETILASCCLGRRLMVWDLS 348
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSA-DKLIKIW 421
L F GHT +S ++P +W+ SS A D +++IW
Sbjct: 366 LLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIW 402
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGIS-----DVAWSSDSRL 508
AV+SVKF+ NG + +S AD+L + H +S DVA S L
Sbjct: 481 AVTSVKFACNGRKMLTSGADRLQMFDVNRKASSVRLSPSHTQTLSHGTIYDVAVDPTSGL 540
Query: 509 IVSASDDKTLKVWELSSGKCLKTLK 583
+V+ DK + ++++ SGK +++ K
Sbjct: 541 VVTVGQDKKINIFDIESGKLVRSFK 565
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +2
Query: 356 VKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKT 535
V P+ +L S +++ I G+ +GH ++ V + D + I+S + D
Sbjct: 576 VILDPSCNYLVCSYSNRTICFVDFVTGELVAQATGHGEAVTGVIFLPDCKHIISVASDGC 635
Query: 536 LKVWEL 553
+ VW+L
Sbjct: 636 IFVWKL 641
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWE 550
H+ ++D+A SSD VSASDD T+KVW+
Sbjct: 1080 HRSAVNDIATSSDHSFFVSASDDSTVKVWD 1109
Score = 33.9 bits (74), Expect = 0.098
Identities = 26/75 (34%), Positives = 36/75 (48%)
Frame = +2
Query: 233 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLI 412
A L G SLS++ S S KP L L H AV+ + S + + S+S D +
Sbjct: 1049 ADLVGEPSLSRT---SVPDSGWKPRGVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTV 1105
Query: 413 KIWGAYDGKFEKTIS 457
K+W + K EK IS
Sbjct: 1106 KVWDS--RKLEKDIS 1118
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 41.1 bits (92), Expect = 6e-04
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Frame = +2
Query: 338 TKA-VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSSDSRL 508
TKA V V+F S +G LA SAD + + + K T+ GH +S V + DS
Sbjct: 659 TKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFV-DSST 717
Query: 509 IVSASDDKTLKVWELS---SG---KCLKTLKGHSN 595
+VS+S D TLK+W+LS SG L + GH+N
Sbjct: 718 LVSSSTDNTLKLWDLSMSASGINESPLHSFTGHTN 752
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
T+ GH+K VS VKF + L SSS D +K+W
Sbjct: 699 TMIGHSKTVSYVKF-VDSSTLVSSSTDNTLKLW 730
Score = 33.1 bits (72), Expect = 0.17
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DS 502
LAG +K S S +ASS+ D +++IW + + HK + + SS D
Sbjct: 580 LAGRSKLSSLCWNSYIKSQIASSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADP 639
Query: 503 RLIVSASDDKT 535
L+ S SDD T
Sbjct: 640 TLLASGSDDGT 650
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
+ ++ +S G + + S D IK W DG T+SGHK +S + + ++ S S
Sbjct: 589 IHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNG--VLYSGSW 645
Query: 527 DKTLKVWELSSGKCLKTL 580
D T+++W LS L L
Sbjct: 646 DGTVRLWSLSDNSLLTVL 663
Score = 35.9 bits (79), Expect = 0.024
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 470 GISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
GI +A+S + + S D T+K W L G L T+ GH + V + ++ S S
Sbjct: 588 GIHALAYSEYGH-VYTGSGDNTIKAWSLQDGSLLCTMSGHKSVV--STLVVVNGVLYSGS 644
Query: 650 FDESVR 667
+D +VR
Sbjct: 645 WDGTVR 650
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 40.7 bits (91), Expect = 9e-04
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
+ GH+ +S +A S S + + S D+TL+VW+ +SG+C LK
Sbjct: 147 LDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLK 190
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/73 (30%), Positives = 40/73 (54%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
+++GH + + V + + S S DKT+KVW L + +C++TL HS+ V +
Sbjct: 269 SLTGHTLAV--VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVM--SLICWD 324
Query: 629 NLIVSSSFDESVR 667
++S S D +V+
Sbjct: 325 QFLLSCSLDNTVK 337
Score = 31.9 bits (69), Expect = 0.39
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-----MGISDVA 487
TL H+ V S+ ++L S S D +KIW A +G + HK + + V
Sbjct: 309 TLTDHSSVVMSLICWD--QFLLSCSLDNTVKIWAAIEGGNLEVTYTHKEEHGVLALCGVH 366
Query: 488 WSSDSRLIVSASDDKTLKVWELSS 559
+ +++ A +D TL++++L S
Sbjct: 367 DAEAKPVLLCACNDNTLRLYDLPS 390
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
++ L L GH K VS + + L + S D+ +++W G+
Sbjct: 140 SFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQ 184
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKM--GISDVA---W 490
L GH +V V F P+ L + SAD ++IW + + H G+ VA W
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHSRANGVLAVAASPW 72
Query: 491 SSDSRLIVSASDDKTLKVWELSSG 562
+ + I+S D T+K W++ G
Sbjct: 73 LGEDK-IISQGRDGTVKCWDIEDG 95
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/81 (24%), Positives = 40/81 (49%)
Frame = +2
Query: 311 TLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAW 490
T++ + VS +G+ A++ D I+++ G + H+ + V++
Sbjct: 299 TIRKEITLERPGVSGTSIRVDGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSY 358
Query: 491 SSDSRLIVSASDDKTLKVWEL 553
S D L+ SAS+D T+ +W+L
Sbjct: 359 SPDCELMASASEDATVALWKL 379
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/47 (23%), Positives = 24/47 (51%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHS 592
+ GH+ + DV++ L+ + S D L++W+ + + + HS
Sbjct: 13 LRGHRHSVMDVSFHPSKSLLFTGSADGELRIWDTIQHRAVSSAWAHS 59
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 430
H ++V +SP+ E +AS+S D + +W Y
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKLY 380
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGE-WLASSSADKLIKIWGAYDGKFEK-TISGHKMGISDVAWSS-D 499
AGHT +V +++SP E AS S D + +W GK + H ++ ++W+
Sbjct: 266 AGHTASVEDLQWSPAEENVFASCSVDGSVAVWDIRLGKSPALSFKAHNADVNVISWNRLA 325
Query: 500 SRLIVSASDDKTLKVWELSSGKCLKTLKGHSNY 598
S ++ S SDD T + +L K + H Y
Sbjct: 326 SCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEY 358
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 233 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFS---PNGEWLASSSAD 403
+ LS + S+ + S+ ++V K L +++ GH AVS V FS G +L S D
Sbjct: 214 SELSRKGTSSKGSSSSSSNNVVK-RVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGND 272
Query: 404 KLIKIWGAY 430
K +KIW +
Sbjct: 273 KTVKIWDCF 281
Score = 34.7 bits (76), Expect = 0.056
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 449 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 595
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 243 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 292
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 233 ASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFS---PNGEWLASSSAD 403
+ LS + S+ + S+ ++V K L +++ GH AVS V FS G +L S D
Sbjct: 240 SELSRKGTSSKGSSSSSSNNVVK-RVCLDYSVGGHNSAVSCVAFSLFQEKGRFLISGGND 298
Query: 404 KLIKIWGAY 430
K +KIW +
Sbjct: 299 KTVKIWDCF 307
Score = 34.7 bits (76), Expect = 0.056
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 449 TISGHKMGISDVAWS---SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSN 595
++ GH +S VA+S R ++S +DKT+K+W+ KCL ++N
Sbjct: 269 SVGGHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF--KCLDPNNNNNN 318
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEW-LASSSADKLIKIWGAYDGKFEKTI 454
AGHT SSV+F P W + + D + +W G+ +K I
Sbjct: 145 AGHTSICSSVQFIPWRPWEVITGGLDSKLVLWDFSKGRSQKII 187
>At4g21530.1 68417.m03111 transducin family protein / WD-40 repeat
family protein contains 1 WD-40 repeat (PF00400);
similar to anaphase-promoting complex subunit 4
GI:6180011 [Homo sapiens]; supported by EST GB:AU237382
Length = 510
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
+ +++P + LA + D I + ++ + TIS K ++ + W D + I +
Sbjct: 27 IKIAEWNPEKDLLAMVTEDSKILLH-RFNWQRLWTISPGKP-VTSLCWRPDGKAIAVGLE 84
Query: 527 DKTLKVWELSSGKCLKTLKGHSNYVFCCNF--NPQSNLIVSSSF 652
D T+ + ++ +GK L+ LK H V C N+ + QSN S +F
Sbjct: 85 DGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQSNTDESGNF 128
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/55 (23%), Positives = 27/55 (49%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
K V+S+ + P+G+ +A D I + +GK + + H + + + W D +
Sbjct: 65 KPVTSLCWRPDGKAIAVGLEDGTISLHDVENGKLLRNLKPHDVAVVCLNWEEDGQ 119
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +2
Query: 506 LIVSASDDKTLKVWELSSGKCLKTLKGHSNYV 601
+I S S DKTLKVW LS KCL+++K H + +
Sbjct: 186 IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAI 217
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 39.9 bits (89), Expect = 0.001
Identities = 21/99 (21%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
+V++ SP+G+ LA I ++ GK ++ GHK AW + ++ + +
Sbjct: 250 SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGN 309
Query: 524 DDKTLKVWEL-SSGKCLKTLKGHSNYVFCCNFNPQSNLI 637
D ++W++ + + LKG+ + F P+ +
Sbjct: 310 QDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPEGRFL 348
Score = 37.5 bits (83), Expect = 0.008
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
+++ + S D +L+ D + + SGK + +L+GH +Y F ++P ++ + +
Sbjct: 251 VNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYSFASAWHPNGLILATGNQ 310
Query: 653 DESVR 667
D + R
Sbjct: 311 DTACR 315
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
L G+ A+ +KF+P G +LA + + I+ G + I+ +++S D+
Sbjct: 329 LKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAGISFSPDTE 388
Query: 506 LIVSASDDKT 535
+ D+T
Sbjct: 389 ALYVGVADRT 398
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 499
+L GH + + PNG LA+ + D ++W + + + G+ I + ++ +
Sbjct: 285 SLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPE 344
Query: 500 SRLIVSASDDKTLKVWELSSG 562
R + A + +++ SG
Sbjct: 345 GRFLAMAEPADFVHIFDTQSG 365
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
LA+ + D +I+++ K + GH I+D+ +S D + ++S+S D +L++W++
Sbjct: 530 LATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVILA 589
Query: 563 K 565
K
Sbjct: 590 K 590
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLI 511
GHT ++ + FS +G+W+ SSS D ++IW D K I G + + A S +
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLRIW---DVILAKQIDGVHVDVPITALSLSPNMD 611
Query: 512 VSA---SDDKTLKVW 547
V A SD + +W
Sbjct: 612 VLATAHSDQNGVYLW 626
Score = 34.7 bits (76), Expect = 0.056
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIW--GAYDG--KFEKTISGHKMGISDVAWSSDS 502
H ++ S+ F N L S+SAD +K+W DG + + SGH + + S+
Sbjct: 267 HDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNG 326
Query: 503 RLIVSASDDKTLKVWEL 553
R I+SA D+ +++ +
Sbjct: 327 RHILSAGQDRAFRLFSV 343
Score = 34.7 bits (76), Expect = 0.056
Identities = 20/88 (22%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +2
Query: 410 IKIWGAYDGKFEKTISGHKMGIS--DVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
+K+W D K + S +G S + + + L+ + +DD ++++++ + K ++ +
Sbjct: 498 LKVW---DFKKRELKSQWDVGCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFR 554
Query: 584 GHSNYVFCCNFNPQSNLIVSSSFDESVR 667
GH++ + F+ ++SSS D S+R
Sbjct: 555 GHTDRITDLCFSEDGKWVISSSMDGSLR 582
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Frame = +2
Query: 218 HGGPSASLSGPNSLSQ--SAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLAS 391
H G + + S SL + P S+ + + F +G ++ S + + +GE +
Sbjct: 2585 HHGKATTTSTSGSLMRMFKGPASSGTGDWQFPQAQAFASSG-IRSSSVIAITSDGEIITG 2643
Query: 392 SSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
AD IK+ + K +T GH ++ +A S D+ +V+ S D T+ +W +
Sbjct: 2644 GHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/114 (22%), Positives = 47/114 (41%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
T GH V+ + SP+ +L + S D + +W + +T S S+ +
Sbjct: 2663 TAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRTSVSEPSTGSGAPSSTSN 2722
Query: 503 RLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+ + +K K L ++ L+GH + CC + ++VSSS V
Sbjct: 2723 TNLANTLANKGKKC-RLEGP--IQVLRGHRRELVCCCVSSDQGVVVSSSESSDV 2773
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 39.1 bits (87), Expect = 0.003
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 7/133 (5%)
Frame = +2
Query: 290 SVAKPNYTLKFT--LAGHTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTI 454
SVA N T ++ HT AV ++ + P LA+ D IK W + G ++
Sbjct: 249 SVASSNPTRQWLHRFEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSV 308
Query: 455 SGHKMGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
+ + WS R ++S+ L +W+ S + L GH++ V +P
Sbjct: 309 ETGSQ-VCSLLWSKSERELLSSHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDG 367
Query: 629 NLIVSSSFDESVR 667
+ S++ DE++R
Sbjct: 368 CTVASAAGDETLR 380
Score = 37.9 bits (84), Expect = 0.006
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 10/123 (8%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-------GKFEKTISGHKMGISD 481
T GHT+ V +K+S +G+ LAS D ++ IW ++ H +
Sbjct: 213 TYLGHTEEVCGLKWSESGKKLASGGNDNVVHIWDHRSVASSNPTRQWLHRFEEHTAAVRA 272
Query: 482 VAWSSDSRLIVSAS---DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
+AW +++ D +K W +G CL +++ S + L+ S F
Sbjct: 273 LAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSKSERELLSSHGF 332
Query: 653 DES 661
++
Sbjct: 333 TQN 335
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/88 (20%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 410 IKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
+ +W A G K TI + ++ + W+ D + D+ +++W+ S + ++TL+
Sbjct: 114 VYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLR 173
Query: 584 -GHSNYVFCCNFNPQSNLIVSSSFDESV 664
GH + V +N ++++ + D +
Sbjct: 174 GGHESRVGSLAWN--NHILTTGGMDGKI 199
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 451
P+ L GHT V + SP+G +AS++ D+ +++W + G+ KT
Sbjct: 343 PSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GEPPKT 391
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
++GH + +A S D + SA+ D+TL++W + G+ KT K
Sbjct: 351 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV-FGEPPKTTK 393
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 1/83 (1%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKMGISD 481
N ++ GH V S+ + N L + D K++ +T GH +
Sbjct: 166 NRQVRTLRGGHESRVGSLAW--NNHILTTGGMDGKIVNNDVRIRSSIVETYLGHTEEVCG 223
Query: 482 VAWSSDSRLIVSASDDKTLKVWE 550
+ WS + + S +D + +W+
Sbjct: 224 LKWSESGKKLASGGNDNVVHIWD 246
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 335 HTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
HT AV ++ + P LA+ D IK W + G ++ + + WS R
Sbjct: 299 HTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQ-VCSLLWSQSER 357
Query: 506 LIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
++S+ L +W+ S + L GH++ V +P + S++ DE++R
Sbjct: 358 ELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLR 413
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT------ISGHKMGISDV 484
T GHT+ V +K+S +G AS D ++ IW ++T H + +
Sbjct: 247 TYLGHTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRAL 306
Query: 485 AWSSDSRLIVSAS---DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
AW +++ D +K W +G CL +++ S + L+ S F
Sbjct: 307 AWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQSERELLSSHGFT 366
Query: 656 ES 661
++
Sbjct: 367 QN 368
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 451
P+ + L GHT V + SPNG +AS++ D+ +++W + G+ KT
Sbjct: 376 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEPPKT 424
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +2
Query: 410 IKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
+ +W A G + TI K ++ + W+ D + D+ +++W+ S + ++TL+
Sbjct: 148 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLR 207
Query: 584 G 586
G
Sbjct: 208 G 208
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH--KMGISDVAWSS-DSRLIVS 517
+ V F+ G LA+ AD IW K I + I+ V+WS RL+VS
Sbjct: 26 IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVS 85
Query: 518 ASDDKTLKVWELSSGK 565
A+D K+L +W++S+G+
Sbjct: 86 AAD-KSLTLWDVSTGE 100
Score = 35.9 bits (79), Expect = 0.024
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +2
Query: 362 FSPNGEWLASSSADK---LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDK 532
FS +GEW+ SA K I IW G K + G K + D+AW +IVS S
Sbjct: 300 FSGDGEWVVGGSACKGEHKIYIWDRA-GHLVKILEGPKEALIDLAWHPVHPIIVSVSLAG 358
Query: 533 TLKVW 547
+ +W
Sbjct: 359 LVYIW 363
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTI 454
A++SV +S G L S+ADK + +W G K +TI
Sbjct: 69 AITSVSWSKYGHRLLVSAADKSLTLWDVSTGEKIARTI 106
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTI-SGHKMGISDVAW--SS 496
L GH V++V+F+ G+ L S S D+ I +W G + + SGH + + +
Sbjct: 51 LNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFT 110
Query: 497 DSRLIVSASDDKTLKVWE-LSSGKC-LKTLKGHSNYVF 604
D R I+++ D +++ + L +GK K L H V+
Sbjct: 111 DDRTIITSGADGQVRLGQILENGKVETKRLGRHHGRVY 148
Score = 34.7 bits (76), Expect = 0.056
Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 332 GHTKA--VSSVKF-SPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDS 502
GH A V V F PN E++ S S I IW GK + + G + ++ +
Sbjct: 316 GHRNAQTVKGVNFFGPNDEYVTSGSDCGHIFIWKKKGGKLVRAMVGDRRVVNQLESHPHI 375
Query: 503 RLIVSASDDKTLKVWELSSGKCL 571
L+ S +K++K+W S L
Sbjct: 376 PLLASCGIEKSVKLWTPMSNDVL 398
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLA--SSSADKLIKIWGAYDGKFEKTISGHKMGIS 478
N+ L A H +V+++ SP+G+ +A S + L+ G+ GK + GH
Sbjct: 267 NFALLNRFAFHW-SVNNISTSPDGKLVAVLGDSPECLLADTGS--GKVIHGLEGHLDYSF 323
Query: 479 DVAWSSDSRLIVSASDDKTLKVWELSS-GKCLKTLKGHSNYVFCCNFNPQSNLI 637
AW + +++ + + D T ++W++ + + LK LKG+ + F +
Sbjct: 324 SSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDGRFL 377
Score = 37.5 bits (83), Expect = 0.008
Identities = 20/102 (19%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 365 SPNGEW-LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
+P+G + +++ D ++++ A + + H +++++ S D +L+ D
Sbjct: 244 APSGSLRVMTANNDCTVRLFDATNFALLNRFAFH-WSVNNISTSPDGKLVAVLGDSPECL 302
Query: 542 VWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + SGK + L+GH +Y F ++P ++ + + D + R
Sbjct: 303 LADTGSGKVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCR 344
Score = 34.3 bits (75), Expect = 0.074
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSDS 502
L GH S + PNG+ LA+ + D ++W + + K + G+ I + ++SD
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 503 RLIVSASDDKTLKVWELSSG 562
R + A + +++ +G
Sbjct: 375 RFLAMAEPADFVHLFDTEAG 394
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 38.3 bits (85), Expect = 0.005
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 5/129 (3%)
Frame = +2
Query: 296 AKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSA---DKLIKIWGAYDGKFEKTISGHK 466
+KP HT AV ++ + P L ++ D IK W + G ++
Sbjct: 284 SKPTRQWLHRFEEHTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGS 343
Query: 467 MGISDVAWSSDSRLIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIV 640
+ + WS R ++S+ L +W+ S + L GH++ V +P +
Sbjct: 344 Q-VCSLLWSQRERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVA 402
Query: 641 SSSFDESVR 667
S++ DE++R
Sbjct: 403 SAAGDENLR 411
Score = 35.5 bits (78), Expect = 0.032
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-------TISGHKMGISD 481
T GHT+ V +K+S +G+ LAS ++ IW K H +
Sbjct: 244 TYLGHTEEVCGLKWSESGKKLASGGNYNVVHIWDHRSVASSKPTRQWLHRFEEHTAAVRA 303
Query: 482 VAWSSDSRLIVSAS---DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
+AW +++ D +K W +G CL +++ S + L+ S F
Sbjct: 304 LAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQRERELLSSHGF 363
Query: 653 DES 661
++
Sbjct: 364 TQN 366
Score = 33.1 bits (72), Expect = 0.17
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 451
P+ + L GHT V + SPNG +AS++ D+ +++W + G+ KT
Sbjct: 374 PSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVF-GEPPKT 422
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/88 (20%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +2
Query: 410 IKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL- 580
+ +W A G + TI K ++ + W+ D + D+ +++W+ S + ++TL
Sbjct: 145 VYLWDASSGSTSELVTIDEDKGPVTSINWTQDGLDLAVGLDNSEVQLWDFVSNRQVRTLI 204
Query: 581 KGHSNYVFCCNFNPQSNLIVSSSFDESV 664
GH + V +N ++++ + D +
Sbjct: 205 GGHESRVGSLAWN--NHILTTGGMDGKI 230
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS- 649
IS + + S +V+ASDD ++++++++S CLKT+ V F ++ SS
Sbjct: 36 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 95
Query: 650 --FDESVR 667
+D+S+R
Sbjct: 96 NGWDDSLR 103
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +2
Query: 401 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
D +++ +D K+ + GH + ++ S +S S D+T+ +W+ KC L
Sbjct: 99 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 158
Query: 581 K 583
+
Sbjct: 159 R 159
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
FSP G ++ S S D WG GK + G + W S + V+ S +
Sbjct: 258 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSELAFV 317
Query: 542 VWELS 556
+ +LS
Sbjct: 318 IPDLS 322
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS- 649
IS + + S +V+ASDD ++++++++S CLKT+ V F ++ SS
Sbjct: 33 ISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSR 92
Query: 650 --FDESVR 667
+D+S+R
Sbjct: 93 NGWDDSLR 100
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +2
Query: 401 DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
D +++ +D K+ + GH + ++ S +S S D+T+ +W+ KC L
Sbjct: 96 DDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLL 155
Query: 581 K 583
+
Sbjct: 156 R 156
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/65 (27%), Positives = 27/65 (41%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLK 541
FSP G ++ S S D WG GK + G + W S + V+ S +
Sbjct: 255 FSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVTGSSELAFV 314
Query: 542 VWELS 556
+ +LS
Sbjct: 315 IPDLS 319
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
+ GH+ ++ +A S S + +AS D+T+++W+ +SG+C L
Sbjct: 140 LDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVL 182
Score = 32.7 bits (71), Expect = 0.23
Identities = 18/73 (24%), Positives = 39/73 (53%)
Frame = +2
Query: 449 TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQS 628
++ GH + + V+ + + S + D ++KVW L + +C++TL H++ V +
Sbjct: 262 SLLGHTLAV--VSLYVGANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVM--SLICWD 317
Query: 629 NLIVSSSFDESVR 667
++S S D +V+
Sbjct: 318 QFLLSCSLDNTVK 330
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMG--I 475
+++L L GH K V+ + + L ++S D+ ++IW G+ ++ G ++G I
Sbjct: 133 SFSLLTQLDGHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGGEVGCII 192
Query: 476 SDVAW 490
S+ W
Sbjct: 193 SEGPW 197
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Frame = +2
Query: 245 GPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWG 424
G N L A ++ + N TL HT V S+ ++L S S D +KIW
Sbjct: 276 GANRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWD--QFLLSCSLDNTVKIWA 333
Query: 425 AYDGKFEKTISGHK--MGISDVAWSSDSR---LIVSASDDKTLKVWELSS 559
A +G + HK G+ + D+ +++ + +D +L +++L S
Sbjct: 334 ATEGGNLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPS 383
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 37.9 bits (84), Expect = 0.006
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Frame = +2
Query: 257 LSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEW--LASSSADKLIKIWGAY 430
LS S+P N V K + LK ++ + + + P +W +A S + +K++
Sbjct: 17 LSDSSPAQN---VKK--FGLKNSIQTNFGSDYVFQIVPKIDWTAIAVSLSTNTVKLYSPV 71
Query: 431 DGKFEKTISGHKMGISDVAWSSDS----RLIVSASDDKTLKVWELSSGKCLKTL-KGHSN 595
G++ GH ++ +A+SSDS ++ S S D T++ W+ S + + + G+
Sbjct: 72 TGQYYGECKGHSDTVNQIAFSSDSAASPHVLHSCSSDGTIRSWDTRSFQQVSRIDTGNDQ 131
Query: 596 YVFCCNFNPQSNLIVSSSFDESV 664
+F ++ ++ +++ E V
Sbjct: 132 EIFSFSYGGAADNLLAGGCKEQV 154
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/96 (23%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT------ISGHKMGISDV 484
T GHT+ V +K+S +G+ LAS D ++ IW T H + +
Sbjct: 231 TYVGHTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRAL 290
Query: 485 AWSSDSRLIVSAS---DDKTLKVWELSSGKCLKTLK 583
AW +++ D + W +G CL +++
Sbjct: 291 AWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVE 326
Score = 37.5 bits (83), Expect = 0.008
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 335 HTKAVSSVKFSP-NGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSR 505
HT AV ++ + P LA+ D I W + G ++ + + WS R
Sbjct: 283 HTAAVRALAWCPFQASLLATGGGVGDGKINFWNTHTGACLNSVETGSQ-VCSLLWSKSER 341
Query: 506 LIVSASD--DKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
++SA L +W+ S + L GH++ V +P + S++ DE++R
Sbjct: 342 ELLSAHGFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLR 397
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT 451
P+ L GHT V + SP+G +AS++ D+ +++W + G+ KT
Sbjct: 360 PSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVF-GEPPKT 408
Score = 31.1 bits (67), Expect = 0.69
Identities = 19/99 (19%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Frame = +2
Query: 377 EWLASSSADKLIKIWGAYDGKFEK--TISGHKMGISDVAWSSDSRLIVSASDDKTLKVWE 550
E++ + +W A K TI ++ + W+ D + D+ ++VW+
Sbjct: 121 EYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWD 180
Query: 551 LSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSSSFDESV 664
S + ++TL+ GH + V +N ++++ + D +
Sbjct: 181 CVSNRHVRTLRGGHESRVGSLAWN--NHILTTGGMDGKI 217
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +2
Query: 452 ISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
++GH + +A S D + SA+ D+TL++W + G+ KT K
Sbjct: 368 LNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNV-FGEPPKTTK 410
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 338 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIV- 514
TK VSS+ SP+G+ L ++S +K + D K + +GH + VA++ D + ++
Sbjct: 158 TKTVSSLCVSPDGKILVTASTQ--LKTFNCSDLKKIQKFTGHPGVVRCVAFTEDGKYVLS 215
Query: 515 SASDDKTLKVWELSSGK 565
SA ++ + VW+ K
Sbjct: 216 SAVGERYIAVWKTDGAK 232
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Frame = +2
Query: 230 SASLSGPNSLSQSAPQSNKSSVAKPNYT----LKFTLAGHTKAVSSVKFSPNGEWLASSS 397
+AS G +L +S + + S+++ + T + F + + +S++ +SP G +LAS+S
Sbjct: 172 AASYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRYLASAS 231
Query: 398 AD-KLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS 559
D IW G G GIS + WS +A D T +WE ++
Sbjct: 232 YDSSSFTIWDVSQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDGTFCLWETNT 285
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 37.5 bits (83), Expect = 0.008
Identities = 21/58 (36%), Positives = 30/58 (51%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRL 508
H VSSV F PNG +A+S ++ IKIW KFE+ + H +++S L
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDL--RKFEEVQTIHSFHAKTLSFSQKGLL 335
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 290 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE 445
+V K TL + + H V+ S GE + S SADK I++W GK E
Sbjct: 879 NVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIVKGKLE 930
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYD--GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELS 556
L S +D I++W I HK ++ + S ++S S DKT++VW++
Sbjct: 866 LFSGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVWQIV 925
Query: 557 SGK--CLKTLK 583
GK C + +K
Sbjct: 926 KGKLECAEVIK 936
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 37.5 bits (83), Expect = 0.008
Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS-SDSR 505
AG ++S ++P+ +++++ I+ W K +I + + +V ++
Sbjct: 165 AGMRHSLSGGAWNPHDVNSVAATSESSIQFWDLRTMKKNNSIE--RAHVRNVDYNLKREH 222
Query: 506 LIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQ-SNLIVSSSFDESV 664
++VSA D+ + +W+L K ++ L GH+++ + NP+ LI+S D +V
Sbjct: 223 ILVSADDESGIHLWDLRKTKFPVQELPGHTHWTWAVRCNPEYEELILSVGTDSAV 277
Score = 28.7 bits (61), Expect = 3.7
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGK-----FEKTISGHKMGISD 481
+L H ++ V + P+G + L S L+ W K K +G + +S
Sbjct: 115 SLDAHVGKINCVLWCPSGNSDKLISMDEQNLV-FWSLDSSKKSAEVLSKESAGMRHSLSG 173
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
AW+ V+A+ + +++ W+L + K K +V ++N + I+ S+ DES
Sbjct: 174 GAWNPHDVNSVAATSESSIQFWDLRTMK--KNNSIERAHVRNVDYNLKREHILVSADDES 231
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 37.1 bits (82), Expect = 0.010
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 6/113 (5%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSD-SRLIVSA- 520
+ SV F + L +SS D ++++ + K K K G V ++ S LI S+
Sbjct: 27 IHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICSSR 86
Query: 521 ----SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
S ++L+ + + L+ KGH + V +P ++ +S S D SVR
Sbjct: 87 YNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVR 139
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/58 (22%), Positives = 28/58 (48%)
Frame = +2
Query: 395 SADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKC 568
S + ++ YD + + GHK + + S + +S S D+++++W+L C
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 148
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWG-AYDG-------KFEKTISGHKMGISDVAWSSDSRLIVSA 520
S +G + + + D L+ +W + DG + EK++ H + + S +I S+
Sbjct: 3283 SHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASS 3342
Query: 521 SDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSS 649
SDD T+ +W+LSS ++ L S V N + IV+++
Sbjct: 3343 SDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYINDLTGEIVTAA 3385
Score = 31.9 bits (69), Expect = 0.39
Identities = 24/89 (26%), Positives = 42/89 (47%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
L+ +L HT V ++ S +ASSS D + IW F + + + ++ V +
Sbjct: 3316 LEKSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLPNFSVPVTVVYIN 3375
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCLKTL 580
+ IV+A+ L VW + +G CL +
Sbjct: 3376 DLTGEIVTAA-GSVLAVWSI-NGDCLSVV 3402
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 37.1 bits (82), Expect = 0.010
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 3/113 (2%)
Frame = +2
Query: 233 ASLSGPNSLSQSAPQSNKSSVAKPNY--TLKFTLAGHTKAVSSVKFSPNGEWLASSSADK 406
ASLS L + + + PN TL+ TL+GH + + P+G ++ + DK
Sbjct: 283 ASLSPDGKLLAIVGDNPEGLIVDPNTGKTLE-TLSGHLDFSFASAWHPDGVTFSTGNQDK 341
Query: 407 LIKIWGAYDGKFEKTI-SGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
++W + T+ G+ I + ++SD + + A + V+++S+G
Sbjct: 342 TCRVWDIRNLSQSVTVLKGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 394
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/65 (23%), Positives = 34/65 (52%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
++ + S D +L+ D+ + + ++GK L+TL GH ++ F ++P + +
Sbjct: 280 VNHASLSPDGKLLAIVGDNPEGLIVDPNTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQ 339
Query: 653 DESVR 667
D++ R
Sbjct: 340 DKTCR 344
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Frame = +2
Query: 308 YTLKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAY-DGKFEKTI--SGHKMG 472
+T H +V+S+ ++P+ G LA ++D I ++ A DG ++ T H +G
Sbjct: 93 WTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNISVFSARADGGWDTTKIDQAHPVG 152
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK 583
++ V+W+ + S V++L+SG C T+K
Sbjct: 153 VTSVSWAPATEPGALVSSGMIDPVYKLASGGCDSTVK 189
Score = 35.1 bits (77), Expect = 0.042
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD---GKFEKTISGHKMGISDVAWSSD- 499
GH+ + V G+ +A++S+D IKI G + + T++GH+ + VAW+
Sbjct: 9 GHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPK 68
Query: 500 -SRLIVSASDDKTLKVWE 550
L+ S S D + +W+
Sbjct: 69 FGSLLASCSYDGQIILWK 86
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFE----KTISGHKMGISDVAWSSDSRL----IVSASDDKTL 538
LAS D +K+W +G ++ ++ H + DVAW+ + L I S S+D +
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 539 KVWEL 553
+W +
Sbjct: 239 IIWTI 243
Score = 31.1 bits (67), Expect = 0.69
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +2
Query: 443 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 613
+K +GH I DV + + +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVA 63
Query: 614 F-NPQ-SNLIVSSSFDESV 664
+ +P+ +L+ S S+D +
Sbjct: 64 WAHPKFGSLLASCSYDGQI 82
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/114 (21%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS-GHKMGISDVAWSSDSR 505
AG ++S + P+ +++ + ++ W K +I H G+
Sbjct: 165 AGMLHSLSGGAWDPHDVNAVAATGESSVQFWDLRTMKKVNSIEHAHVRGVDYNP--KREH 222
Query: 506 LIVSASDDKTLKVWELSSGKC-LKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
++V+A D+ + VW+L K ++ L GH+++ + NP+ + ++ S+ +SV
Sbjct: 223 ILVTAEDESGIHVWDLRKAKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSV 276
Score = 30.7 bits (66), Expect = 0.91
Identities = 28/119 (23%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKL-IKIWGAYDGK-----FEKTISGHKMGISDV 484
+L H ++ V + P+G S D+ I +W K K +G +S
Sbjct: 115 SLDAHVGKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGG 174
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDES 661
AW V+A+ + +++ W+L + K + +++ H+ +V ++NP+ I+ ++ DES
Sbjct: 175 AWDPHDVNAVAATGESSVQFWDLRTMKKVNSIE-HA-HVRGVDYNPKREHILVTAEDES 231
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 491 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
S D +L+ DD + + S+G+ + TLKGH +Y F ++P + + D++ R
Sbjct: 286 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 344
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 499
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 314 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 373
Query: 500 SRLIVSASDDKTLKVWELSSG 562
R + A + +++ SG
Sbjct: 374 GRYVAMAEPADFVHIYDTKSG 394
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 491 SSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
S D +L+ DD + + S+G+ + TLKGH +Y F ++P + + D++ R
Sbjct: 280 SPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCR 338
Score = 35.9 bits (79), Expect = 0.024
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYD-GKFEKTISGHKMGISDVAWSSD 499
TL GH + + PNG A+ + DK +IW + + G+ + + ++SD
Sbjct: 308 TLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSD 367
Query: 500 SRLIVSASDDKTLKVWELSSG 562
R + A + +++ SG
Sbjct: 368 GRYVAMAEPADFVHIYDTKSG 388
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 36.3 bits (80), Expect = 0.018
Identities = 19/89 (21%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +2
Query: 371 NGE-WLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSS-DSRLIVSASDDKTLKV 544
NG ++A+ +I++ K++ GH ++++ +L+++AS D+++++
Sbjct: 96 NGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRL 155
Query: 545 WELSSGKCLKTLK---GHSNYVFCCNFNP 622
W + +G C+ GH V +F+P
Sbjct: 156 WNVETGICILIFAGAGGHRYEVLSVDFHP 184
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 446 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
+ +GH+ G+ + W SDS +++ + D W+ ++ + + L +N+ F ++ P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 623 Q-SNLIVSSSFDESV 664
+ +I +SSFD +
Sbjct: 317 KIPGVISASSFDGKI 331
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Frame = +2
Query: 446 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
+ +GH+ G+ + W SDS +++ + D W+ ++ + + L +N+ F ++ P
Sbjct: 257 REFTGHQRGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVAELPAGNNWNFDVHWYP 316
Query: 623 Q-SNLIVSSSFDESV 664
+ +I +SSFD +
Sbjct: 317 KIPGVISASSFDGKI 331
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 35.9 bits (79), Expect = 0.024
Identities = 23/78 (29%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Frame = +2
Query: 332 GHTKAVSSVKFSPNGEWLASSSADKLIKIWG-AYDGKFEK--TISGHKMGISDVAWSSD- 499
GH V V+ G+ +A++S+D IKI G + +G ++ T++GH+ + +VAW+
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPK 68
Query: 500 -SRLIVSASDDKTLKVWE 550
++ S S D + +W+
Sbjct: 69 YGSILASCSYDGQVILWK 86
Score = 31.5 bits (68), Expect = 0.52
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFE----KTISGHKMGISDVAWSSDSRL----IVSASDDKTL 538
LAS D +K+W +G ++ + H + DVAW+ + L I S S D +
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
Query: 539 KVWEL-SSGKCL--KTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
+W + G+ K LK V+ +++ NL+ S + +V
Sbjct: 239 IIWTVGKEGEQWEGKVLKDFMTPVWRVSWSLTGNLLAVSDGNNNV 283
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Frame = +2
Query: 443 EKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSS---GKCLKTLKGHSNYVFCCN 613
+K +GH+ + DV + I +AS D T+K+ +S+ + L TL GH V+
Sbjct: 4 QKIETGHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVA 63
Query: 614 F-NPQ-SNLIVSSSFDESV 664
+ +P+ +++ S S+D V
Sbjct: 64 WAHPKYGSILASCSYDGQV 82
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 35.9 bits (79), Expect = 0.024
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Frame = +2
Query: 362 FSPNGEWLASSSADKLIKIWGAYDGK-FEKTIS-GHKMGISDVAWSSDSRLIVSASDDKT 535
F+ G +L S+S K+ +D K FEK S G ++ L+ DD +
Sbjct: 437 FAVKGSYLFSTSGGKI----AVFDLKNFEKVASFGSPTPMATYFIFIPGDLLAVGLDDGS 492
Query: 536 LKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
+ + LSS K + L+GH + C F+ N++VSS D
Sbjct: 493 IFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSD 532
Score = 33.5 bits (73), Expect = 0.13
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Frame = +2
Query: 374 GEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
G+ LA D I I K ++ + GH I+ +A+S ++VS+ D L +W
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLW-- 538
Query: 554 SSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSSSFD 655
S+ +K +S FC N +S +L+ FD
Sbjct: 539 STKSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFD 573
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/108 (20%), Positives = 53/108 (49%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
AVS ++FSP L +S D ++++ ++ + + D + ++S S S
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNS-QAALLDCCFENESTSFTSGS 73
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D ++ ++L++G + T+ H + ++ + ++S+ FDE ++
Sbjct: 74 DG-FIRRYDLNAG-TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIK 119
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/108 (20%), Positives = 53/108 (49%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
AVS ++FSP L +S D ++++ ++ + + D + ++S S S
Sbjct: 15 AVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNS-QAALLDCCFENESTSFTSGS 73
Query: 524 DDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
D ++ ++L++G + T+ H + ++ + ++S+ FDE ++
Sbjct: 74 DG-FIRRYDLNAG-TVDTIGRHDDISTSIVYSYEKGEVISTGFDEKIK 119
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 35.9 bits (79), Expect = 0.024
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Frame = +2
Query: 236 SLSGPNSLSQSAPQSNKSSVAKPNYTLKF-TLAGHTKAVSSVKFSPNGEWLASSSADKLI 412
SLS L + +S + PN TL+GH + + P+G ++ + DK
Sbjct: 282 SLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTC 341
Query: 413 KIWGAYD-GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
++W + K + G+ I + ++SD + + A + V+++S+G
Sbjct: 342 RVWDIRNLSKSVAVLRGNLGAIRSIRYTSDGKYMAMAEPADFVHVYDVSNG 392
Score = 35.1 bits (77), Expect = 0.042
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASD 526
V+ SP+G+ L + + GK T+SGH AW D + +
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 527 DKTLKVWELSS-GKCLKTLKGH 589
DKT +VW++ + K + L+G+
Sbjct: 338 DKTCRVWDIRNLSKSVAVLRGN 359
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSF 652
++ + S D +L+ D+ + + ++GK L TL GH ++ F ++P + +
Sbjct: 278 VNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQ 337
Query: 653 DESVR 667
D++ R
Sbjct: 338 DKTCR 342
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 446 KTISGHKMGISDVAWS-SDSRLIVSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNP 622
+T GH+ G+ + W SDS +++ D W +GK + L N+ F ++ P
Sbjct: 246 RTFVGHQRGVIAMEWCPSDSLYLLTCGKDNRTICWNTKTGKIVAELPTGQNWNFDVHWYP 305
Query: 623 QSNLIVSSS 649
+ ++S+S
Sbjct: 306 KMPGVISAS 314
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 7/92 (7%)
Frame = +2
Query: 326 LAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-------GAYDGKFEKTISGHKMGISDV 484
L H+ V+ ++FS + L S S D+ ++ G K + HK I
Sbjct: 643 LQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWAC 702
Query: 485 AWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
+W+ ++S DKT+K+W + + +K +
Sbjct: 703 SWNPFGHQFATSSRDKTVKIWSVENDARIKQI 734
Score = 32.7 bits (71), Expect = 0.23
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +2
Query: 437 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVW 547
+ +K SGH ++DV W+ ++S S D+T +V+
Sbjct: 406 QMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVF 442
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +2
Query: 287 SSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAY 430
SS N+ ++ +GH AV+ V ++ GE+L S S D+ +++ A+
Sbjct: 398 SSKESENWQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFSAW 445
Score = 31.5 bits (68), Expect(2) = 0.029
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 13/60 (21%)
Frame = +2
Query: 281 NKSSVAKPNYTLKFT----LAGHTKAVSSVKFS---------PNGEWLASSSADKLIKIW 421
NK + T KFT L GHT + S+ FS PN L SSS DK+I+IW
Sbjct: 200 NKIKLYSGERTGKFTSVCELKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIW 259
Score = 23.0 bits (47), Expect(2) = 0.029
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 13/53 (24%)
Frame = +2
Query: 428 YDGKFEKTISGHKMGISDVAWSS------DSRL-------IVSASDDKTLKVW 547
Y E + GH+ + V W D RL I+SAS DKT+ +W
Sbjct: 292 YQISVESVLIGHEDWVYSVEWQPPVIDFIDGRLVNHQPLSILSASMDKTMMIW 344
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 35.5 bits (78), Expect = 0.032
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = +2
Query: 284 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGH 463
K++ K + FT GH VSS+ F L S S D + IW A + ++ GH
Sbjct: 247 KNNQVKDSVHCAFT--GHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGH 304
Query: 464 KMGISDVAWSSDSRLIVSASDDKTLKVWELS----SGKCLKTLKGHSNYVFCCNFNPQSN 631
+ + + R ++S D+T++++++ L SN+ CC N S+
Sbjct: 305 QSELLSIDALGRER-VLSVGRDRTMQLYKVGIVVPESTRLIYRASESNFECCCFVN--SD 361
Query: 632 LIVSSSFDESV 664
+S S + S+
Sbjct: 362 EFLSGSDNGSI 372
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 446 KTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
+ I H+ ++ VA S D S S D T+ W++SSGK
Sbjct: 139 RVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGK 178
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 35.1 bits (77), Expect = 0.042
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Frame = +2
Query: 353 SVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGI---SDV-AWSSDS---RLI 511
SV +SP+ + + S S+D LI+ W A I+ G+ S++ WS S ++
Sbjct: 203 SVTWSPDAKRIFSGSSDGLIRCWDATSCHEVYRITAGLGGLGSSSEICVWSLLSLRCSVL 262
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFDESV 664
VS T++ W+ G L+ H V P N + S+ D V
Sbjct: 263 VSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQV 313
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Frame = +2
Query: 482 VAWSSDSRLIVSASDDKTLKVWELSSG----KCLKTLKGH-----SNYVFCC--NFNPQS 628
+A SSD + +A +D +L++W +S G C T+ G S+ +CC + S
Sbjct: 19 LANSSDDSQVAAAREDGSLEIWLVSPGAVGWHCQLTIHGDPNSRISSLAWCCSPSIGLPS 78
Query: 629 NLIVSSSFDESV 664
+ SSS D S+
Sbjct: 79 GRLFSSSIDGSI 90
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 35.1 bits (77), Expect = 0.042
Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 335 HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDG-KFEKTISGHKMGISDVAWSSDSRLI 511
H ++ +V+F +G+ + ++SAD I G + + H+ ++ + +++ I
Sbjct: 50 HKESCRAVRFIDDGQRIVTASADCSILATDVETGAQVAHLENAHEDAVNTLINVTET-TI 108
Query: 512 VSASDDKTLKVWELSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSSSFD 655
S D +K+W+ C H +Y+ F S +V +S D
Sbjct: 109 ASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGD 156
Score = 33.9 bits (74), Expect = 0.098
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
+AS +KIW + H+ IS + ++SDS +V S D TL V L +
Sbjct: 108 IASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTS 167
Query: 563 K 565
K
Sbjct: 168 K 168
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 634
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 635 IVSSSFDESV 664
S ++V
Sbjct: 114 FAVGSGAKTV 123
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 634
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 635 IVSSSFDESV 664
S ++V
Sbjct: 114 FAVGSGAKTV 123
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL--KGHSNYVFCCNFNPQSNL 634
H +S + WSS S IV+ S D+ VW L + + TL + C ++P+ N
Sbjct: 54 HDQIVSGIDWSSKSNKIVTVSHDRNSYVWSLEGAEWVPTLVILRLNRAALCVQWSPKENK 113
Query: 635 IVSSSFDESV 664
S ++V
Sbjct: 114 FAVGSGAKTV 123
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 34.7 bits (76), Expect = 0.056
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +2
Query: 338 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVS 517
TK SP+ W+A+ + +++ + F + H ++ + + +S L+VS
Sbjct: 414 TKHGDGASVSPS--WIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLV-APESHLLVS 470
Query: 518 ASDDKTLKVWELSSGKCLK--TLKGHSNYV 601
+S DKTL++W+L + +KGH++ V
Sbjct: 471 SSLDKTLRIWDLRKSWTPQPFVVKGHNDGV 500
Score = 27.5 bits (58), Expect = 8.5
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = +2
Query: 410 IKIWG--AYDGKFEKTISGHKMGISDVAWSSDSRL----IVSASDDKTLKVWELSSGKCL 571
+++WG A + F +S G S + + I + ++++L +
Sbjct: 388 LELWGGEAIESGFTSLVSALCSGGSQTKHGDGASVSPSWIAAGFSSGQCRLFDLRENGFI 447
Query: 572 KTLKGHSNYVFCCNFNPQSNLIVSSSFDESVR 667
+ + H YV P+S+L+VSSS D+++R
Sbjct: 448 SSWRAHDGYVTKL-VAPESHLLVSSSLDKTLR 478
>At3g49400.1 68416.m05400 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400); low
similarity (47%) to Agamous-like MADS box protein AGL5
(SP:P29385) {Arabidopsis thaliana}
Length = 892
Score = 34.7 bits (76), Expect = 0.056
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Frame = +2
Query: 257 LSQSAPQSNKSSVAKPNY-TLKFTLAGHTKAVSSVKFSPNGEW----LASSSADKLIKIW 421
+S N V K ++ LK +A + VS++ F + + LA ++W
Sbjct: 358 MSNKEDLQNSVEVYKSSFFLLKEVVAVNPVQVSTLSFVVSNHYNAMHLAIGKGSGSFEVW 417
Query: 422 GAYDG--KFEKTIS--GHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
KFE+ +S H ++ +AWS D R + S S D ++ W L
Sbjct: 418 KCEISTRKFEQIVSTNAHNQVVTGLAWSYDGRCLYSCSQDNYVRSWIL 465
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +2
Query: 431 DGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
DG+ ++I HK +S VA ++DS ++ + S D T+ VW++
Sbjct: 1035 DGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWDI 1075
>At3g26480.1 68416.m03301 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (5 copies, 2 below cutoff); related to
LACK protective antigen (GI:13625467) [Leishmania
donovani]
Length = 764
Score = 34.3 bits (75), Expect = 0.074
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 12/104 (11%)
Frame = +2
Query: 290 SVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW-----GAY-------D 433
+VA + K T HT+ ++ F PN LA+ + IW G + D
Sbjct: 176 NVASEHLMPKETTLHHTELITVFAFHPNQRILAAGDVTGRVLIWKDNGIGEFTSVKTEDD 235
Query: 434 GKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
+ T + H ++ + +SSD L+ S VWEL +GK
Sbjct: 236 TESCTTFNWHSAEVTVLNFSSDGALLYSGVKAGDFVVWELGTGK 279
>At5g07590.1 68418.m00870 WD-40 repeat protein family contains 3
WD-40 repeats (PF00400); similarity to WD-repeat protein
8 (WDR8)(SP:Q9P2S5] [HOMO SAPIENS]
Length = 458
Score = 33.9 bits (74), Expect = 0.098
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADK-LIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
+S ++++ + E++ K +I+ W ++ I GIS WS DSR I++ S
Sbjct: 50 ISYIEWALDSEYILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS 109
Query: 524 D-DKTLKVWELSSGKCL 571
+ L VW L + C+
Sbjct: 110 EFQLRLTVWSLLNTACV 126
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 33.9 bits (74), Expect = 0.098
Identities = 19/61 (31%), Positives = 28/61 (45%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
+AS +KIW + H+ IS + ++SDS +V S D TL V L +
Sbjct: 51 IASGDDKGCVKIWDTRQRSCSHEFNAHEDYISGMTFASDSMKLVVTSGDGTLSVCNLRTS 110
Query: 563 K 565
K
Sbjct: 111 K 111
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 33.9 bits (74), Expect = 0.098
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +2
Query: 365 SPNGEWLASSSADKLIKIWG-AYDG-------KFEKTISGHKMGISDVAWSSDSRLIVSA 520
S +G + + + D L+ +W + DG + EK + H ++ + S +I S
Sbjct: 3339 SHDGRIVVTGAEDGLVCVWRVSKDGPRGSRRLRLEKALCAHTAKVTCLRVSQPYMMIASG 3398
Query: 521 SDDKTLKVWELSS 559
SDD T+ +W+LSS
Sbjct: 3399 SDDCTVIIWDLSS 3411
Score = 31.1 bits (67), Expect = 0.69
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 314 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWS 493
L+ L HT V+ ++ S +AS S D + IW F + + + IS + +
Sbjct: 3372 LEKALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYIN 3431
Query: 494 SDSRLIVSASDDKTLKVWELSSGKCL 571
+ IV+A+ L VW + +G CL
Sbjct: 3432 DLTGEIVTAA-GTVLAVWSI-NGDCL 3455
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 33.5 bits (73), Expect = 0.13
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 344 AVSSVKFSPNGEWLASSSADKLIKIWGA-YDGKFEK-TISGHKMGISDVAWSSDSRLIVS 517
A+ + +SP+G ++S SAD +I I+ Y+ ++ HK + W S L+VS
Sbjct: 584 ALINQSWSPDGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYPLLVS 643
Query: 518 ASDDKTLKVWEL 553
S D + + +L
Sbjct: 644 ISSDLAIGIHKL 655
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 335 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTI--SGHKMGISDVAWSSD 499
HTK + S+ SP N E A+S+ D + W + T+ + +++ + W+ D
Sbjct: 337 HTKRMRSLALSPSNRELFATSALDGAVHFWKLQSDRSTATLFKTVNRVAVDQKKWAED 394
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
L + S D IW E + H + D+AW ++R+ S S D ++++++L
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVRIFDL 203
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
L + S D IW E + H + D+AW ++R+ S S D ++++++L
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVRIFDL 203
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
L + S D IW E + H + D+AW ++R+ S S D ++++++L
Sbjct: 148 LGTCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAW-GEARVFASVSADGSVRIFDL 203
>At3g08850.1 68416.m01029 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 1 weak)
Length = 1344
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEK-------TISGHKMGISD----VAWSSDSRLIVSASDD 529
L +S D ++IW Y K ++ +I GHK G D V W S + ++ +
Sbjct: 1089 LLVASCDGSVRIWKNYATKGKQKLVTGFSSIQGHKPGARDLNAVVDWQQQSGYLYASGET 1148
Query: 530 KTLKVWELSSGKCLKTLKGHS 592
T+ +W+L + ++++ S
Sbjct: 1149 STVTLWDLEKEQLVRSVPSES 1169
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 27.1 bits (57), Expect(2) = 0.31
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 422 GAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGK 565
G D + T H ++ + +SSD + S + L VW+L +GK
Sbjct: 269 GEDDAESCTTWHWHSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGK 316
Score = 23.8 bits (49), Expect(2) = 0.31
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +2
Query: 317 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK 439
K TL HTK +++ F P +A+ + IW + +
Sbjct: 206 KMTLH-HTKVINAFAFHPTERVIAAGDVTGRVLIWRGFGNR 245
>At1g30750.1 68414.m03758 expressed protein
Length = 212
Score = 31.9 bits (69), Expect = 0.39
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 185 PVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVSSVKF 364
P+ G P+ + P + P+S + P S+ SS + FT + +S V F
Sbjct: 122 PILGQPSTSSSLNQPLTGFNQPSSTGFNQPISSSSSSSSSAQNQPFTNRLNQNNLSGVPF 181
Query: 365 SPNGEWLASSSADKLIKIW 421
NG S K+I IW
Sbjct: 182 L-NGNSKLKVSGTKIIFIW 199
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 30.7 bits (66), Expect = 0.91
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 341 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDG 436
K++ + FS + E+LA++S D +IW A DG
Sbjct: 165 KSIRDMDFSLDSEFLATTSTDGSARIWKAEDG 196
>At4g16280.3 68417.m02471 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 533
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +2
Query: 173 VPLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVS 352
+PL P P A P A S SQ PQ N S P L L T + +
Sbjct: 426 LPLRPQTNFPGAQAPLQNPYA-YSSQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSA 484
Query: 353 SVKFSPNGE 379
+V+F P +
Sbjct: 485 TVQFPPRSQ 493
>At4g16280.2 68417.m02470 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 747
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +2
Query: 173 VPLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVS 352
+PL P P A P A S SQ PQ N S P L L T + +
Sbjct: 426 LPLRPQTNFPGAQAPLQNPYA-YSSQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSA 484
Query: 353 SVKFSPNGE 379
+V+F P +
Sbjct: 485 TVQFPPRSQ 493
>At4g16280.1 68417.m02469 flowering time control protein / FCA gamma
(FCA) identical to SP|O04425 Flowering time control
protein FCA {Arabidopsis thaliana}; four alternative
splice variants, one splicing isoform contains a
non-consensus CA donor splice site, based on cDNA:
gi:2204090
Length = 505
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +2
Query: 173 VPLGPVPGHPAAHQTHGGPSASLSGPNSLSQSAPQSNKSSVAKPNYTLKFTLAGHTKAVS 352
+PL P P A P A S SQ PQ N S P L L T + +
Sbjct: 184 LPLRPQTNFPGAQAPLQNPYA-YSSQLPTSQLPPQQNISRATAPQTPLNINLRPTTVSSA 242
Query: 353 SVKFSPNGE 379
+V+F P +
Sbjct: 243 TVQFPPRSQ 251
>At3g50590.1 68416.m05533 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); some
similarity to s-tomosyn isoform (GI:4689231)[Rattus
norvegicus]; contains non-consensus AT-AC splice sites
at intron 18
Length = 1606
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Frame = +2
Query: 305 NYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMG---I 475
+YTL+ SS F P EW+ + W + I ++G I
Sbjct: 191 HYTLQLDNTIKLIGASSFAFHPTLEWIFVGDRRGTLLAWDVSTER-PNMIGITQVGSQPI 249
Query: 476 SDVAWSSDSRLIVSASDDKTLKVWE 550
+ ++W R++V+ S D +L+VW+
Sbjct: 250 TSISWLPMLRVLVTVSKDGSLQVWK 274
>At5g65750.1 68418.m08274 2-oxoglutarate dehydrogenase E1 component,
putative / oxoglutarate decarboxylase, putative /
alpha-ketoglutaric dehydrogenase, putative similar to
SP|P20967 2-oxoglutarate dehydrogenase E1 component,
mitochondrial precursor (EC 1.2.4.2)
(Alpha-ketoglutarate dehydrogenase) {Saccharomyces
cerevisiae}; contains Pfam profiles PF02779:
Transketolase, pyridine binding domain, PF00676:
Dehydrogenase E1 component
Length = 1025
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +2
Query: 8 CSFKIYVELNEKKRLREVQNFLICR 82
CS K+Y EL+E+++ E ++ ICR
Sbjct: 901 CSGKVYYELDEERKKSETKDVAICR 925
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to beta-transducin
repeats containing protein - Homo sapiens,PID:e1284220;
3' EST no_NP:TC8031
Length = 1446
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 302 PNYTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
PN+ + + T A+S++ FSP+GE L + S + L+ W
Sbjct: 1305 PNFLRGASESAVTTAISALSFSPDGEGLVAFSENGLMIRW 1344
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 509 IVSASDDKTLKVWELSSGKCLKTLK 583
++SA D L VW SSG+C K K
Sbjct: 108 LISACTDGVLCVWSRSSGQCRKRRK 132
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 347 VSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSAS 523
V+S+ F P A+ D + IW + K S + IS +++S D +L+ AS
Sbjct: 244 VNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYSKYPTSISALSFSRDGQLLAVAS 302
>At4g31160.1 68417.m04423 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
KIAA0800 protein, Homo sapiens GI:3882321 EMBL:AB018343
Length = 1846
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 410 IKIWGAYDGKFEKTISGHKMGISDVA--WSSDSRLIVSASDDKTLKVWELSS 559
IKI+ A G +++SGH+ ++ V S D++L++S+S +++W+ SS
Sbjct: 1453 IKIFEASSGSMLESVSGHQAPVTLVQPYVSRDTQLLLSSS-SSDVQLWDASS 1503
>At2g01470.1 68415.m00070 St12p protein (ST12p) / SEC12p protein,
putative 99.8% identical to St12p protein (GI:166878)
{Arabidopsis thaliana}
Length = 393
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +2
Query: 437 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTLK-GHSNYVFCCN 613
K+ K I K IS S+D +L+ + + + + E + + ++ +K H V
Sbjct: 278 KWSKPIK--KNSISAFNVSADGKLLAIGTLEGDVLILESTRMQTIQVVKKAHLGLVTALT 335
Query: 614 FNPQSNLIVSSSFDESVR 667
F+P S +VS SFD R
Sbjct: 336 FSPDSRGLVSVSFDSRAR 353
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 473 ISDVAWSSDSRLIVSASDDKTLKVWELSSGKCL 571
+ +A+S D + ++S+ D + VW+L + KCL
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCL 409
>At3g26640.1 68416.m03329 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to ATAN11 (GI:2290528) [Arabidopsis thaliana]
(Genes Dev. 11 (11), 1422-1434 (1997)); contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies)
Length = 346
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRL-IVSASDDKTLKVWELSS 559
H+ ++ +AW+ S I SA DD +W++SS
Sbjct: 266 HQASVNAIAWAPHSSSHICSAGDDSQALIWDISS 299
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
+ +SS D IW + + H + D+AW + S S+D +++V++L
Sbjct: 151 IGTSSIDTTCTIWDIEREVVDTQLIAHDKEVYDIAWGGVG-VFASVSEDGSVRVFDL 206
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 323 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIW 421
+L+GH V +++ +G LAS+ +D ++K+W
Sbjct: 275 SLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSG 562
L S + ++ W + G + S HK ++ +A S + SA D + +++LS G
Sbjct: 262 LVSGDSTGSVQFWDSQHGTLLQAHSNHKGDVNALAASPSHNRVFSAGADGQVILYKLSGG 321
>At1g12910.1 68414.m01499 flower pigmentation protein (AN11)
contains 3 WD-40 repeats (PF00400); identical to
GB:AAC18912 from [Arabidopsis thaliana] (Genes Dev. 11
(11), 1422-1434 (1997))
Length = 346
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +2
Query: 461 HKMGISDVAWSSDSRL-IVSASDDKTLKVWELSS 559
H+ ++ +AW+ S I +A DD +W++SS
Sbjct: 266 HQASVNAIAWAPHSSCHICTAGDDSQALIWDISS 299
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = +2
Query: 383 LASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWEL 553
+ +SS D IW + + H + D+AW + S S D +++V++L
Sbjct: 151 IGTSSTDTTCTIWDIEREAVDTQLIAHDKEVFDIAWGGVG-VFASVSADGSVRVFDL 206
>At5g51270.1 68418.m06356 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 819
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = -3
Query: 242 ISWLKGHREFDVQQGGLARDLAAPCFNYRRTTLYVFVTPHNHYYTQNXKVNESFDKLKSF 63
+SW R+FD ++ ++ + F Y VTP HY+T N KL++
Sbjct: 303 VSWNPQFRDFDERKDAMSS--MSSNFEYGNV-----VTPLGHYFTDNQDTLNEISKLRAE 355
Query: 62 VLRAVSFFHLVQ 27
+ A + + Q
Sbjct: 356 LRHAHEMYAVAQ 367
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 27.9 bits (59), Expect = 6.4
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 7/96 (7%)
Frame = +2
Query: 329 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK----FEKTISGHKMGISDVAWSS 496
A TK V FSP+ +L +S+ D ++ DG+ FE M + + +
Sbjct: 624 ASSTKGNVMVCFSPDDRYLLASAVDNEVRQLLTVDGRLHLNFEIVPRVSSMNYTRSYYMN 683
Query: 497 DSRLIVSAS-DDKTLKVWELSSGKCLK--TLKGHSN 595
+ I+S S D+ ++V +G+ L+ TL+G+ +
Sbjct: 684 GNDYIISGSCDENVIRVCCAQTGRRLRDVTLEGNGS 719
>At3g20620.1 68416.m02609 F-box family protein-related contains weak
hit to TIGRFAM TIGR01640 : F-box protein interaction
domain; similar to F-box protein family, AtFBX8
(GI:20197464) [Arabidopsis thaliana]
Length = 391
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 437 KFEKTISGHKMGISDVAWSSDSRLIVSASDDKTLKVWELSSGKCLKTL 580
++ KT+S H + +S L+V S KT+K++ + + +C +L
Sbjct: 30 RYCKTVSKHLAKLQLAESGKNSSLVVCPSMGKTMKLYSMDAKRCKLSL 77
>At1g65030.1 68414.m07371 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to PAK/PLC-interacting protein 1 (GI:14211689)
[Homo sapiens]
Length = 345
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/72 (23%), Positives = 32/72 (44%)
Frame = +2
Query: 350 SSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKMGISDVAWSSDSRLIVSASDD 529
S VKF P+GE ++K + + + D K + A +S + + +D
Sbjct: 175 SLVKFDPSGERFYMVVSNK-VGVHQSEDAKLLLELENPSRKRILCATPGESGTLFTGGED 233
Query: 530 KTLKVWELSSGK 565
+ + W+ +SGK
Sbjct: 234 RAITAWDTNSGK 245
>At1g59453.1 68414.m06679 transcription factor-related weak similarity
to TFIIIC Box B-binding subunit [Homo sapiens] GI:442362
Length = 1729
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 284 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLI 412
+ S P+ T ++ G TK +SVK P W+ A S +K++
Sbjct: 1592 EESTKAPSVTFGTSIEGETKESTSVKSQPIFPWINADGSVNKVV 1635
>At1g59077.1 68414.m06670 hypothetical protein
Length = 665
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 284 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLI 412
+ S P+ T ++ G TK +SVK P W+ A S +K++
Sbjct: 528 EESTKAPSVTFGTSIEGETKESTSVKSQPIFPWINADGSVNKVV 571
>At1g58766.1 68414.m06659 hypothetical protein
Length = 665
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 284 KSSVAKPNYTLKFTLAGHTKAVSSVKFSPNGEWL-ASSSADKLI 412
+ S P+ T ++ G TK +SVK P W+ A S +K++
Sbjct: 528 EESTKAPSVTFGTSIEGETKESTSVKSQPIFPWINADGSVNKVV 571
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,224,690
Number of Sequences: 28952
Number of extensions: 299145
Number of successful extensions: 2220
Number of sequences better than 10.0: 251
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1901
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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