Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0276
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.6  
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       21   9.6  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 487 LLWFYCQTLLY 519
           ++ FYC TLLY
Sbjct: 317 MIAFYCMTLLY 327


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 487 LLWFYCQTLLY 519
           ++ FYC TLLY
Sbjct: 317 MIAFYCMTLLY 327


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +1

Query: 490  LWFYCQTLLYFYNHRFRQNYTIDK 561
            L++Y   +  ++N  F  NY I+K
Sbjct: 2529 LYYYPGDVYDYFNANFSLNYWIEK 2552


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +1

Query: 262 PLRRKRRRHHSPLHHPAHYT 321
           PL R        LHHP H T
Sbjct: 30  PLPRHFNPPSDKLHHPIHQT 49


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,112
Number of Sequences: 336
Number of extensions: 2587
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)