Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0275
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation ... 134 3e-31
CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein. 134 3e-31
BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongatio... 134 3e-31
AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongatio... 134 3e-31
AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongatio... 127 3e-29
AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongatio... 127 3e-29
AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongatio... 127 3e-29
X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation ... 94 5e-19
X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation ... 94 5e-19
M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation ... 94 5e-19
CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein. 94 5e-19
BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongatio... 94 5e-19
BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongatio... 94 5e-19
X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation ... 91 3e-18
BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongatio... 89 1e-17
AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongatio... 89 1e-17
AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongatio... 89 1e-17
AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongatio... 89 1e-17
BC050623-1|AAH50623.1| 242|Homo sapiens TCEA2 protein protein. 78 3e-14
AJ844627-1|CAH59746.1| 86|Homo sapiens transcription elongatio... 69 2e-11
AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antige... 66 8e-11
AL590548-2|CAI13199.1| 82|Homo sapiens transcription elongatio... 62 2e-09
D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein. 52 2e-06
BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3 pr... 52 2e-06
BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3 pr... 52 2e-06
AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3 pr... 52 2e-06
AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3 pr... 52 2e-06
AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3 pr... 52 2e-06
AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens ... 49 2e-05
AY481572-1|AAS49899.1| 2240|Homo sapiens death inducer-obliterat... 45 2e-04
AY481571-1|AAS49898.1| 1189|Homo sapiens death inducer-obliterat... 45 2e-04
AL117379-2|CAM28273.1| 1189|Homo sapiens death inducer-obliterat... 45 2e-04
AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterat... 45 2e-04
AL035669-2|CAI95770.2| 1189|Homo sapiens death inducer-obliterat... 45 2e-04
AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterat... 45 2e-04
AB002331-1|BAA20791.2| 1223|Homo sapiens KIAA0333 protein. 45 2e-04
BC035374-1|AAH35374.1| 208|Homo sapiens chromosome 1 open readi... 40 0.011
AL353898-9|CAI22669.1| 208|Homo sapiens chromosome 1 open readi... 40 0.011
AL353898-8|CAI22668.1| 238|Homo sapiens chromosome 1 open readi... 40 0.011
AK056674-1|BAB71250.1| 208|Homo sapiens protein ( Homo sapiens ... 40 0.011
BC110430-1|AAI10431.1| 600|Homo sapiens mediator complex subuni... 39 0.019
AF104253-1|AAD12722.1| 600|Homo sapiens transcriptional co-acti... 39 0.019
L47345-1|AAA75492.1| 772|Homo sapiens elongin A protein. 38 0.025
BC002883-1|AAH02883.1| 772|Homo sapiens transcription elongatio... 38 0.025
AL031295-2|CAB40157.1| 772|Homo sapiens transcription elongatio... 38 0.025
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 32 1.7
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.7
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 32 1.7
BC114430-1|AAI14431.1| 1203|Homo sapiens SPOCD1 protein protein. 32 1.7
BC029069-1|AAH29069.1| 266|Homo sapiens SPOCD1 protein protein. 32 1.7
BC007910-1|AAH07910.2| 342|Homo sapiens SPOCD1 protein protein. 32 1.7
BC005267-1|AAH05267.1| 312|Homo sapiens PPP1R10 protein protein. 32 1.7
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 32 1.7
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.7
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.7
AL354919-9|CAI16892.1| 696|Homo sapiens SPOC domain containing ... 32 1.7
AL354919-8|CAI16891.1| 342|Homo sapiens SPOC domain containing ... 32 1.7
AK131447-1|BAD18592.1| 1216|Homo sapiens protein ( Homo sapiens ... 32 1.7
AK091016-1|BAC03567.1| 696|Homo sapiens protein ( Homo sapiens ... 32 1.7
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 32 1.7
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.7
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 32 1.7
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 32 1.7
>D50495-1|BAA09089.1| 299|Homo sapiens transcription elongation
factor S-II, hS-II-T1 protein.
Length = 299
Score = 134 bits (324), Expect = 3e-31
Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 202 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 345
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 346 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 525
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 526 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EE
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEE 225
>CR456940-1|CAG33221.1| 299|Homo sapiens TCEA2 protein.
Length = 299
Score = 134 bits (324), Expect = 3e-31
Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 202 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 345
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 346 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 525
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 526 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EE
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEE 225
>BC018896-1|AAH18896.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 134 bits (324), Expect = 3e-31
Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 202 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 345
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 346 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 525
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 526 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EE
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEE 225
>AL590548-1|CAI13198.1| 299|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 299
Score = 134 bits (324), Expect = 3e-31
Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 12/226 (5%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 202 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 345
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 346 XXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFK 525
+FPP T DAVR KCRE+LT AL+ + CI+ +
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDHDHVAIGADCERLSAQIEECIFRDVG 179
Query: 526 NTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EE
Sbjct: 180 NTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEE 225
>AL590548-5|CAD11901.1| 272|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 272
Score = 127 bits (307), Expect = 3e-29
Identities = 77/191 (40%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLST------------ 270
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 271 PNTTXXXXXXXXXXXXXXXXXXXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAG 450
P T +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 451 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVIS 630
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G I+
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAIT 187
Query: 631 ASRLAKMTPEE 663
++A MT EE
Sbjct: 188 PQQIAVMTSEE 198
>AL590548-4|CAD11900.1| 270|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 270
Score = 127 bits (307), Expect = 3e-29
Identities = 77/191 (40%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLST------------ 270
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 271 PNTTXXXXXXXXXXXXXXXXXXXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAG 450
P T +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 451 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVIS 630
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G I+
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAIT 187
Query: 631 ASRLAKMTPEE 663
++A MT EE
Sbjct: 188 PQQIAVMTSEE 198
>AL590548-3|CAI13200.1| 246|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 246
Score = 127 bits (307), Expect = 3e-29
Identities = 77/191 (40%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLST------------ 270
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGM 67
Query: 271 PNTTXXXXXXXXXXXXXXXXXXXXXXXXXLPASFPPQSNTTDAVRLKCRELLTQALKAAG 450
P T +FPP T DAVR KCRE+LT AL+
Sbjct: 68 PLPTSSRDASEAPDPSRKRPELPRAPSTPRITTFPPVPVTCDAVRNKCREMLTAALQTDH 127
Query: 451 ETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVIS 630
+ CI+ + NTDM+YKNRVRSR++NLKD KNP LR N G I+
Sbjct: 128 DHVAIGADCERLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAIT 187
Query: 631 ASRLAKMTPEE 663
++A MT EE
Sbjct: 188 PQQIAVMTSEE 198
>X62585-1|CAA44470.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 93.9 bits (223), Expect = 5e-19
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = +1
Query: 364 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 543
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 544 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
KNRVRSR++NLKD KNP LR N G I A+MT EE
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEE 227
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 28 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 207
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 208 DDEVISLCKTLIKNWKKFLSTPNT 279
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>X57198-1|CAA40484.1| 280|Homo sapiens transcription elongation
factor protein.
Length = 280
Score = 93.9 bits (223), Expect = 5e-19
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = +1
Query: 364 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 543
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 107 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 166
Query: 544 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
KNRVRSR++NLKD KNP LR N G I A+MT EE
Sbjct: 167 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEE 206
Score = 58.4 bits (135), Expect = 2e-08
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = +1
Query: 163 TRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNT 279
TRIGM+VNA+RK S D+EV SL K+LIK+WKK L P+T
Sbjct: 23 TRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPST 61
>M81601-1|AAA61138.1| 301|Homo sapiens transcription elongation
factor SII protein.
Length = 301
Score = 93.9 bits (223), Expect = 5e-19
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = +1
Query: 364 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 543
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 544 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
KNRVRSR++NLKD KNP LR N G I A+MT EE
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEE 227
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 28 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 207
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 208 DDEVISLCKTLIKNWKKFLSTPNT 279
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>CR542221-1|CAG47017.1| 301|Homo sapiens TCEA1 protein.
Length = 301
Score = 93.9 bits (223), Expect = 5e-19
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = +1
Query: 364 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 543
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 544 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
KNRVRSR++NLKD KNP LR N G I A+MT EE
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEE 227
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 28 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 207
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 208 DDEVISLCKTLIKNWKKFLSTPNT 279
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>BT019995-1|AAV38798.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 93.9 bits (223), Expect = 5e-19
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = +1
Query: 364 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 543
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 544 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
KNRVRSR++NLKD KNP LR N G I A+MT EE
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEE 227
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 28 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 207
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 208 DDEVISLCKTLIKNWKKFLSTPNT 279
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>BC072460-1|AAH72460.1| 301|Homo sapiens transcription elongation
factor A (SII), 1 protein.
Length = 301
Score = 93.9 bits (223), Expect = 5e-19
Identities = 47/100 (47%), Positives = 59/100 (59%)
Frame = +1
Query: 364 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 543
+SFP +T+D+VRLKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 544 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
KNRVRSR++NLKD KNP LR N G I A+MT EE
Sbjct: 188 KNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEE 227
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 28 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 207
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 208 DDEVISLCKTLIKNWKKFLSTPNT 279
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>X73534-1|CAA51940.1| 301|Homo sapiens transcription elongation
factor protein.
Length = 301
Score = 91.5 bits (217), Expect = 3e-18
Identities = 46/100 (46%), Positives = 59/100 (59%)
Frame = +1
Query: 364 ASFPPQSNTTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRY 543
+SFP +T+D+V+LKCRE+L AL+ + IY E +NTDM+Y
Sbjct: 128 SSFPRAPSTSDSVQLKCREMLAAALRTGDDYIAIGADEEELGSQIEEAIYQEIRNTDMKY 187
Query: 544 KNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
KNRVRSR++NLKD KNP LR N G I A+MT EE
Sbjct: 188 KNRVRSRISNLKDAKNPYLRKNVLCGNIPPDLFARMTAEE 227
Score = 69.3 bits (162), Expect = 1e-11
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 28 VEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKSSK 207
+E++V++ KK+ KM + + + + L++L TRIGM+VNA+RK S
Sbjct: 1 MEDEVVRFAKKMDKMVQKKNAA--GALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQST 58
Query: 208 DDEVISLCKTLIKNWKKFLSTPNT 279
D+EV SL K+LIK+WKK L P+T
Sbjct: 59 DEEVTSLAKSLIKSWKKLLDGPST 82
>BC041613-1|AAH41613.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 89.4 bits (212), Expect = 1e-17
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = +1
Query: 388 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 567
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 568 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+NLKDP+NP LR N +G ISA +AKMT EE
Sbjct: 243 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 202 SKDDEVISLCKTLIKNWKKFLSTP 273
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL357134-3|CAI22178.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 89.4 bits (212), Expect = 1e-17
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = +1
Query: 388 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 567
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 568 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+NLKDP+NP LR N +G ISA +AKMT EE
Sbjct: 243 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 202 SKDDEVISLCKTLIKNWKKFLSTP 273
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL109936-2|CAI19025.1| 348|Homo sapiens transcription elongation
factor A (SII), 3 protein.
Length = 348
Score = 89.4 bits (212), Expect = 1e-17
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = +1
Query: 388 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 567
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 183 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 242
Query: 568 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+NLKDP+NP LR N +G ISA +AKMT EE
Sbjct: 243 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 274
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 202 SKDDEVISLCKTLIKNWKKFLSTP 273
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AJ223473-1|CAA11393.1| 320|Homo sapiens transcription elongation
factor TFIIS.h protein.
Length = 320
Score = 89.4 bits (212), Expect = 1e-17
Identities = 46/92 (50%), Positives = 60/92 (65%)
Frame = +1
Query: 388 TTDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRV 567
T D+VR KC E+L+ ALKA + + + IY E K+TDM+Y+NRVRSR+
Sbjct: 155 TGDSVRDKCVEMLSAALKADDDYKDYGVNCDKMASEIEDHIYQELKSTDMKYRNRVRSRI 214
Query: 568 ANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+NLKDP+NP LR N +G ISA +AKMT EE
Sbjct: 215 SNLKDPRNPGLRRNVLSGAISAGLIAKMTAEE 246
Score = 54.8 bits (126), Expect = 3e-07
Identities = 23/45 (51%), Positives = 32/45 (71%)
Frame = +1
Query: 139 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTP 273
+++ +L TRIG+ VN +RK D EV+SL K LIKNWK+ L +P
Sbjct: 10 MSIQLLQTTRIGVAVNGVRKHCSDKEVVSLAKVLIKNWKRLLDSP 54
>BC050623-1|AAH50623.1| 242|Homo sapiens TCEA2 protein protein.
Length = 242
Score = 78.2 bits (184), Expect = 3e-14
Identities = 53/152 (34%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++ +I ++L KM ++ + M I L +L TR+GM+VNALRK
Sbjct: 2 MGKEEEIARIARRLDKMVTKKSA--EGAMDLLRELKAMPITLHLLQSTRVGMSVNALRKQ 59
Query: 202 SKDDEVISLCKTLIKNWKKFLST------------PNTTXXXXXXXXXXXXXXXXXXXXX 345
S D+EVI+L K+LIK+WKK L P T
Sbjct: 60 SSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRDASEAPDPSRKRPELPRA 119
Query: 346 XXXXLPASFPPQSNTTDAVRLKCRELLTQALK 441
+FPP T DAVR KCRE+LT AL+
Sbjct: 120 PSTPRITTFPPVPVTCDAVRNKCREMLTAALQ 151
>AJ844627-1|CAH59746.1| 86|Homo sapiens transcription elongation
factor A protein 2 (SII) protein.
Length = 86
Score = 68.5 bits (160), Expect = 2e-11
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = +1
Query: 505 CIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
CI+ NTDM+YKNRVRSR++NLKD KNP LR N G I+ ++A MT EE
Sbjct: 6 CIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEE 58
>AY540752-1|AAT44402.1| 154|Homo sapiens rhabdomyosarcoma antigen
MU-RMS-40.22 protein.
Length = 154
Score = 66.5 bits (155), Expect = 8e-11
Identities = 36/84 (42%), Positives = 47/84 (55%)
Frame = +1
Query: 22 MSVEEDVMKIQKKLTKMTSEDGTGQXXXXXXXXXXQTMAINLDVLTKTRIGMTVNALRKS 201
M EE++++I KKL KM + T M+I L L TRIG+ VN +RK
Sbjct: 1 MGQEEELLRIAKKLEKMVARKNTEGALDLLKKLHSCQMSIQL--LQTTRIGVAVNGVRKH 58
Query: 202 SKDDEVISLCKTLIKNWKKFLSTP 273
D EV+SL K LIKNWK+ L +P
Sbjct: 59 CSDKEVVSLAKVLIKNWKRLLDSP 82
>AL590548-2|CAI13199.1| 82|Homo sapiens transcription elongation
factor A (SII), 2 protein.
Length = 82
Score = 62.1 bits (144), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 264
+ M I L +L TR+GM+VNALRK S D+EVI+L K+LIK+WKK L
Sbjct: 8 KAMPITLHLLQSTRVGMSVNALRKQSSDEEVIALAKSLIKSWKKLL 53
>D87685-1|BAA13438.2| 2044|Homo sapiens KIAA0244 protein.
Length = 2044
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 508 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE
Sbjct: 971 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEE 1022
>BC113652-1|AAI13653.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 508 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEE 1017
>BC113650-1|AAI13651.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 508 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEE 1017
>AL445676-1|CAI16104.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 508 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEE 1017
>AL050329-1|CAM45842.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 508 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEE 1017
>AF091622-1|AAF21292.1| 2039|Homo sapiens PHD finger protein 3
protein.
Length = 2039
Score = 52.0 bits (119), Expect = 2e-06
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 508 IYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
+++ F++TD +YKN+ RS + NLKDPKN L G ++ L +M+PEE
Sbjct: 966 LFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEE 1017
>AK097032-1|BAC04930.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ39713 fis, clone SMINT2013170, weakly similar to
TRANSCRIPTION FACTOR S-II-RELATED PROTEIN 4. ).
Length = 217
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/91 (30%), Positives = 42/91 (46%)
Frame = +1
Query: 391 TDAVRLKCRELLTQALKAAGETSNACGSPXXXXXXXXXCIYAEFKNTDMRYKNRVRSRVA 570
T +R KC ELL AL ++ ++ + +YK +RS+VA
Sbjct: 37 TTPMRTKCIELLYAALTSSSTDQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVA 96
Query: 571 NLKDPKNPTLRTNFFNGVISASRLAKMTPEE 663
NLK+P+N L+ N +G S A+MT E
Sbjct: 97 NLKNPRNSHLQQNLLSGTTSPREFAEMTVME 127
>AY481572-1|AAS49899.1| 2240|Homo sapiens death
inducer-obliterator-3 protein.
Length = 2240
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEW---QVMKWKK 687
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE ++ WK+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 772
>AY481571-1|AAS49898.1| 1189|Homo sapiens death
inducer-obliterator-2 protein.
Length = 1189
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEW---QVMKWKK 687
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE ++ WK+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 772
>AL117379-2|CAM28273.1| 1189|Homo sapiens death inducer-obliterator
1 protein.
Length = 1189
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEW---QVMKWKK 687
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE ++ WK+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 772
>AL117379-1|CAO03650.1| 2240|Homo sapiens death inducer-obliterator
1 protein.
Length = 2240
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEW---QVMKWKK 687
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE ++ WK+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 772
>AL035669-2|CAI95770.2| 1189|Homo sapiens death inducer-obliterator
1 protein.
Length = 1189
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEW---QVMKWKK 687
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE ++ WK+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 772
>AL035669-1|CAI95769.2| 2240|Homo sapiens death inducer-obliterator
1 protein.
Length = 2240
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEW---QVMKWKK 687
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE ++ WK+
Sbjct: 714 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 772
>AB002331-1|BAA20791.2| 1223|Homo sapiens KIAA0333 protein.
Length = 1223
Score = 45.2 bits (102), Expect = 2e-04
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Frame = +1
Query: 520 FKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMTPEEW---QVMKWKK 687
F+ TD RYK++ RS + NLKDPKN L IS ++L ++ PEE ++ WK+
Sbjct: 748 FQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKE 806
>BC035374-1|AAH35374.1| 208|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 148 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 261
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>AL353898-9|CAI22669.1| 208|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 208
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 148 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 261
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>AL353898-8|CAI22668.1| 238|Homo sapiens chromosome 1 open reading
frame 83 protein.
Length = 238
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 148 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 261
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 104 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 140
>AK056674-1|BAB71250.1| 208|Homo sapiens protein ( Homo sapiens
cDNA FLJ32112 fis, clone OCBBF2001586, weakly similar to
TRANSCRIPTION ELONGATION FACTOR S-II. ).
Length = 208
Score = 39.5 bits (88), Expect = 0.011
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +1
Query: 148 DVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKF 261
+VL TRIG TVN +RK S D EV SL + + WK F
Sbjct: 74 EVLKSTRIGHTVNKMRKHS-DSEVASLAREVYTEWKTF 110
>BC110430-1|AAI10431.1| 600|Homo sapiens mediator complex subunit
26 protein.
Length = 600
Score = 38.7 bits (86), Expect = 0.019
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 139 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 264
I + L +TR+G +N +RK +K++E+ K L+++W+K +
Sbjct: 43 ITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI 84
>AF104253-1|AAD12722.1| 600|Homo sapiens transcriptional
co-activator CRSP70 protein.
Length = 600
Score = 38.7 bits (86), Expect = 0.019
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +1
Query: 139 INLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 264
I + L +TR+G +N +RK +K++E+ K L+++W+K +
Sbjct: 43 ITKEALEETRLGKLINDVRKKTKNEELAKRAKKLLRSWQKLI 84
>L47345-1|AAA75492.1| 772|Homo sapiens elongin A protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 130 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 264
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>BC002883-1|AAH02883.1| 772|Homo sapiens transcription elongation
factor B (SIII), polypeptide 3 (110kDa, elongin A)
protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 130 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 264
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>AL031295-2|CAB40157.1| 772|Homo sapiens transcription elongation
factor B (SIII), polypeptide 3 (110kDa, elongin A)
protein.
Length = 772
Score = 38.3 bits (85), Expect = 0.025
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +1
Query: 130 TMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFL 264
T+ I +D+L +T +G TVN+LR K + V S + L+ WKK +
Sbjct: 35 TLPITVDILAETGVGKTVNSLR---KHEHVGSFARDLVAQWKKLV 76
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BC114430-1|AAI14431.1| 1203|Homo sapiens SPOCD1 protein protein.
Length = 1203
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 523 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMT 654
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+
Sbjct: 653 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 696
>BC029069-1|AAH29069.1| 266|Homo sapiens SPOCD1 protein protein.
Length = 266
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 523 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMT 654
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+
Sbjct: 35 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 78
>BC007910-1|AAH07910.2| 342|Homo sapiens SPOCD1 protein protein.
Length = 342
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 523 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMT 654
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+
Sbjct: 51 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 94
>BC005267-1|AAH05267.1| 312|Homo sapiens PPP1R10 protein protein.
Length = 312
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AL354919-9|CAI16892.1| 696|Homo sapiens SPOC domain containing 1
protein.
Length = 696
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 523 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMT 654
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+
Sbjct: 146 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 189
>AL354919-8|CAI16891.1| 342|Homo sapiens SPOC domain containing 1
protein.
Length = 342
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 523 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMT 654
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+
Sbjct: 51 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 94
>AK131447-1|BAD18592.1| 1216|Homo sapiens protein ( Homo sapiens
cDNA FLJ16587 fis, clone TESTI4000214, weakly similar
to Human transcription factor TFIIS. ).
Length = 1216
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 523 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMT 654
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+
Sbjct: 653 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 696
>AK091016-1|BAC03567.1| 696|Homo sapiens protein ( Homo sapiens
cDNA FLJ33697 fis, clone BRAWH2004068. ).
Length = 696
Score = 32.3 bits (70), Expect = 1.7
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 523 KNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRLAKMT 654
+ T+ RYK + RS + NL+DP+N L +G ++ L +M+
Sbjct: 146 QGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMS 189
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase
nuclear targeting subunit protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 32.3 bits (70), Expect = 1.7
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +1
Query: 127 QTMAINLDVLTKTRIGMTVNALRKSSKDDEVISLCKTLIKNWKKFLSTPNTT 282
Q + + +D L + V L KSS+D+E+ L L+ +W + + ++T
Sbjct: 99 QHLPLTVDHLKQNNTAKLVKQLSKSSEDEELRKLASVLVSDWMAVIRSQSST 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.127 0.364
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,717,493
Number of Sequences: 237096
Number of extensions: 1137629
Number of successful extensions: 9507
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 9446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9489
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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