Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0274
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   2.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.0  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   6.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   9.2  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.2  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.2  

>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 151 TCVYVVFLLNSLSPDN 104
           TC +VVFL   + PDN
Sbjct: 10  TCAHVVFLEEYVIPDN 25


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 601 CVHRQCVSRGLFC 639
           C    C+ RGLFC
Sbjct: 124 CGDGNCIERGLFC 136


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 384 CPRYNVQCEVSTPELLCPTDCQ 449
           CP+ N     + P    P DCQ
Sbjct: 172 CPKVNETVAATHPRYADPDDCQ 193


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 600 LRSSTVRFQRSFLLRTIRLWNKL 668
           L    VRF +     T++LW++L
Sbjct: 79  LEQFIVRFMKYHFFGTLKLWSQL 101


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 349 LDQIIDLPRRLAAHVTTSSARFP 417
           L+++ D+ R    H+T    RFP
Sbjct: 70  LNELFDVTRDNYRHITELKRRFP 92


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = +1

Query: 298 SHSL*VSCFSHPVFTNYLDQIIDLPRRLAAHVTTSSARFPLQ 423
           + +L +  F H     Y+D  +    R  AH+    +R P++
Sbjct: 137 TQNLDLPSFIHVFPDKYVDSQVFARAREEAHIVPEGSRTPIE 178


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = -1

Query: 453 RTDNRWGTKVLEWKPRTGRCNVG 385
           R +N W      W P T   N+G
Sbjct: 7   RLENTWRAFTASWSPDTLAKNLG 29


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,446
Number of Sequences: 336
Number of extensions: 3966
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)