Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0270
(672 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-P... 31 1.4
AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p pro... 31 1.9
AY060910-1|AAL28458.1| 285|Drosophila melanogaster GM05651p pro... 31 1.9
AE014298-2078|AAF48405.2| 657|Drosophila melanogaster CG9504-PA... 31 1.9
AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA... 31 1.9
AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-P... 30 3.3
AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-P... 30 3.3
AE014298-2650|AAF48787.1| 531|Drosophila melanogaster CG12672-P... 29 5.8
AE014296-2488|AAF49657.2| 503|Drosophila melanogaster CG6869-PA... 29 7.6
>AE014296-1986|AAS65029.1| 3135|Drosophila melanogaster CG18331-PA
protein.
Length = 3135
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSSTG + TT T TTSS GGE
Sbjct: 992 TSSDEGQTTSSSDPVSEVAQGSSSTGDGNSTQSSTTTTTTTTTSSDGGE 1040
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ D Q SSS G + TT T TTSS GGE
Sbjct: 1792 TSSDEGQTTSSSAPVVDISQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1840
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ D Q SSS G + TT T TTSS GGE
Sbjct: 1872 TSSDEGQTTSSSAPVVDISQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1920
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 912 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 960
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 1152 TSSDEGQTTSSSAPVVEVTQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1200
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 1232 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1280
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 1312 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1360
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 1472 TSSDEGQTTSSSAPVVEVTQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1520
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 1632 TSSDEGQTTSSSAPVVEVTQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1680
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 1712 TSSDEGQTTSSSAPVVEVTQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 1760
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 1952 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 2000
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 2032 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 2080
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 2112 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 2160
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 2192 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 2240
Score = 29.5 bits (63), Expect = 4.4
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 284 TSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSSLGGE 430
TSS G ++ + Q SSS G + TT T TTSS GGE
Sbjct: 2272 TSSDEGQTTSSSDPVVEVAQGSSSNGDGNSTQSSTTTTTTTTTSSDGGE 2320
>AY118573-1|AAM49942.1| 898|Drosophila melanogaster LD43055p
protein.
Length = 898
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 198 PTHRAS*PYGMHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 335
P + S P +H C S +++ RLR + ITQHS + T
Sbjct: 674 PGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLET 719
>AY060910-1|AAL28458.1| 285|Drosophila melanogaster GM05651p
protein.
Length = 285
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 198 PTHRAS*PYGMHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 335
P + S P +H C S +++ RLR + ITQHS + T
Sbjct: 67 PGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLET 112
>AE014298-2078|AAF48405.2| 657|Drosophila melanogaster CG9504-PA
protein.
Length = 657
Score = 30.7 bits (66), Expect = 1.9
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Frame = -1
Query: 504 LENVVSEIQASVNYLALYDGYPPHHSPP--RLEV--VSYLVIVVRAEISLQVPVLLEVCG 337
+++V + AS LA +P H PP RLE+ Y+V+ + S+ L E+C
Sbjct: 54 MQSVAIALNASSLALANNTAWPLQHEPPEDRLEIESYDYIVVGAGSAGSIVASRLSELCQ 113
Query: 336 ESKLSLNAA*LSPVLLEVCG 277
L L L P+ E+ G
Sbjct: 114 VKVLLLEEGQLPPLESEIFG 133
>AE014297-1147|AAF54528.1| 892|Drosophila melanogaster CG6325-PA
protein.
Length = 892
Score = 30.7 bits (66), Expect = 1.9
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3
Query: 198 PTHRAS*PYGMHLHCLIAQHSSSVSTHRRLRAALATITQHSSSVST 335
P + S P +H C S +++ RLR + ITQHS + T
Sbjct: 674 PGYHTSLPMEVHGSCYSEMQMISQASYHRLRCSSVVITQHSFDLET 719
>AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-PA
protein.
Length = 157
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 266 SLDSPQTSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSS 418
S S +S+ST +++ S +P +SSST S+ T T +TSS
Sbjct: 49 STPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
>AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-PA
protein.
Length = 157
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 266 SLDSPQTSSSTGDNHAAFKLSFDSPQTSSSTGTCKLISARTTITKYDTTSS 418
S S +S+ST +++ S +P +SSST S+ T T +TSS
Sbjct: 49 STPSSSSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
>AE014298-2650|AAF48787.1| 531|Drosophila melanogaster CG12672-PA
protein.
Length = 531
Score = 29.1 bits (62), Expect = 5.8
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = +2
Query: 215 LTLRHAPTLPHRAAFKLSLDSPQTSSSTGDNHAAFKLSFDSPQTSSSTGT 364
L L+H P+ AA SLDS Q + G N A T +ST T
Sbjct: 188 LNLQHQPSAAGAAAGSASLDSQQQNPLGGSNTGAISRIGTMTGTGTSTST 237
>AE014296-2488|AAF49657.2| 503|Drosophila melanogaster CG6869-PA
protein.
Length = 503
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/76 (26%), Positives = 29/76 (38%)
Frame = +1
Query: 7 KIFLSSYISLQLVTCDGTIATF*LIISASRTSATTIPAFSQIKVSRRQSSHSKPASQPQQ 186
KI L Y L L+ C + F + T P SQI ++Q H +
Sbjct: 5 KISLKKYFYLTLI-C-ALLLIFGFSLKEREIWKTLSPRSSQITTQQQQHQHLHQLQSMDE 62
Query: 187 DHRSRLTALPDPTACT 234
+H ++ P P A T
Sbjct: 63 EHPMATSSTPPPIAAT 78
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,549,009
Number of Sequences: 53049
Number of extensions: 647935
Number of successful extensions: 2822
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2819
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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