Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0266
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 126 3e-30
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 42 8e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 1e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 40 4e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 39 5e-04
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 35 0.009
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 32 0.083
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.19
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.19
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 29 0.58
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.58
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 29 0.58
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.3
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 1.8
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 26 4.1
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 26 5.4
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 7.2
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 25 9.5
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 9.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 126 bits (304), Expect = 3e-30
Identities = 65/136 (47%), Positives = 86/136 (63%), Gaps = 2/136 (1%)
Frame = +1
Query: 247 QADRRRPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 426
+A R +G CF R E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F G
Sbjct: 63 RAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-GY 121
Query: 427 VDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNC 600
++ + ++F SL FVY LD+ARTRLA D K G+R+F+GL +
Sbjct: 122 KKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDV 181
Query: 601 ISKIFKSDGLIGLYRG 648
K ++SDGL GLYRG
Sbjct: 182 YRKTYRSDGLRGLYRG 197
Score = 54.0 bits (124), Expect = 2e-08
Identities = 29/48 (60%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Frame = +2
Query: 143 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGI 283
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGI 74
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 41.9 bits (94), Expect = 8e-05
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1
Query: 511 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
+YPLD +TR+ VGK D ++G +C+ KI K++G LYRG
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYRG 67
Score = 37.1 bits (82), Expect = 0.002
Identities = 32/136 (23%), Positives = 53/136 (38%)
Frame = +1
Query: 241 RQQADRRRPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 420
R Q + G C +I K +G +RG ++ P +AL FA D Y +++
Sbjct: 35 RMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLWR 94
Query: 421 GGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNC 600
+K T V P + + RL DV +++G +C
Sbjct: 95 KVFKRKDS---SPALSILTGSCAGFTETFVVVPFELMKIRL-QDVKNAS---KYNGTVDC 147
Query: 601 ISKIFKSDGLIGLYRG 648
+KI K + ++ LY G
Sbjct: 148 FTKIVKQERILALYNG 163
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +2
Query: 158 LAGGISAAVSKTAVAPIERVKLLLQVQH 241
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 40.3 bits (90), Expect = 2e-04
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 295 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 474
V+I +GL+ F+RGN N +R FP A+ FA + KQ L K
Sbjct: 64 VKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRAL----KNRSHQNLENHERL 119
Query: 475 XXXXXXXTSLC-FVYPLDFARTRLAAD 552
+ C YPLD ARTRL+ +
Sbjct: 120 LFGAIAGAASCATTYPLDIARTRLSIE 146
Score = 30.3 bits (65), Expect = 0.25
Identities = 27/116 (23%), Positives = 46/116 (39%)
Frame = +1
Query: 301 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXX 480
+ E G + + G A ++ P ++ F + KQ F D T F + F
Sbjct: 180 VQHEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFSNADL-TAFQKLFLGGFTGI 238
Query: 481 XXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
T +P D R R + G G + + + I I+K++G+ G +RG
Sbjct: 239 IGQTLT-----FPADVLRRRFQVNRIPGIGHN-YKNIKSAIFHIYKTEGINGFFRG 288
Score = 27.5 bits (58), Expect = 1.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 574 REFSGLGNCISKIFKSDGLIGLYRG 648
+E++ L + + KI+ +GLIG +RG
Sbjct: 54 KEYTSLTSTLVKIWNREGLIGFFRG 78
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 39.5 bits (88), Expect = 4e-04
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +1
Query: 316 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 495
G+ SF+ GN NV++ P ++ F + K+V G+ ++
Sbjct: 184 GIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVL--GISSSSENHSPLYSYLAGGMAGSV 241
Query: 496 TSLCFVYPLDFARTRL-AADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
+ F+YP+D + R+ +D+ +G + L N +++KS G+ G YRG
Sbjct: 242 AQM-FIYPVDTLKFRIQCSDLSRGQHGKSII-LSNA-KELYKSVGIRGYYRG 290
Score = 33.9 bits (74), Expect = 0.020
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 131 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 229
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 2.3
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +2
Query: 155 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 250
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.1 bits (87), Expect = 5e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 149 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRY 274
K +AGG + V+K+ VAP++RVK+L Q H S + A R+
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH 60
Score = 33.1 bits (72), Expect = 0.036
Identities = 20/77 (25%), Positives = 35/77 (45%)
Frame = +1
Query: 316 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXX 495
GL ++G+ A + R FP + F ++ ++V + + +T R+
Sbjct: 74 GLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGTC---- 129
Query: 496 TSLCFVYPLDFARTRLA 546
S+ F YPL+ R RLA
Sbjct: 130 -SVFFTYPLELIRVRLA 145
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 35.1 bits (77), Expect = 0.009
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 3/148 (2%)
Frame = +1
Query: 214 CQAAAPSTARQQADRRRPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA- 390
C A T +QA + ++G R F + KE+G+ RG A +R A
Sbjct: 125 CMKTAEVTRAKQAATGQE-VKGTFRVFADLYKEKGIRGINRGVNAVALRQMTNWGSRLAL 183
Query: 391 --FKDKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKG 564
F +K + F G +T+ C+ PL+ AR + + + KG
Sbjct: 184 SRFLEKPIRYFTG----RTEAEPLTTGQRFVASVSAGALSCWNQPLEVARVEMQS-LTKG 238
Query: 565 DGQREFSGLGNCISKIFKSDGLIGLYRG 648
Q G+ I I+K++G+ GLYRG
Sbjct: 239 I-QHSSPGIMQTIMSIYKNNGIKGLYRG 265
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 31.9 bits (69), Expect = 0.083
Identities = 31/142 (21%), Positives = 53/142 (37%), Gaps = 6/142 (4%)
Frame = +1
Query: 241 RQQADRRRPALQGYRR----CFV--RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDK 402
+Q A + P YR C + + +G + +RG N+I P +++NF
Sbjct: 87 KQTAKSKSPLTAAYRHFMDTCIILKNVKVHEGTRALFRGLGPNLIGTIPARSINFFSYGN 146
Query: 403 YKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREF 582
K++ D + P+ +TRL D G +
Sbjct: 147 GKRIL---ADLFNNGQENSQIHLMAAAIAGVITSAATNPIWLVKTRLQLDKKSGQAAQYR 203
Query: 583 SGLGNCISKIFKSDGLIGLYRG 648
S + +CI K + +G GLY+G
Sbjct: 204 SSI-DCIIKTIRLEGFRGLYKG 224
Score = 30.3 bits (65), Expect = 0.25
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 92 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 232
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 265 PALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 387
P G +CF + EQG++ + G A+++R P + F
Sbjct: 310 PKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.19
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 134 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 238
PV + +++G IS + V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 27.5 bits (58), Expect = 1.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 140 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQ 238
+F KDFLA G+S V++ V P + VK+ LQ Q
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQ 48
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1
Query: 595 NCISKIFKSDGLIGLYRG 648
+C+ KI K++GL Y+G
Sbjct: 60 DCVKKISKNEGLAAFYKG 77
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 30.7 bits (66), Expect = 0.19
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +2
Query: 158 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVD 289
++GG+S A++ + P++ VK LLQ + S I ++ KG +D
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLD 251
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 29.1 bits (62), Expect = 0.58
Identities = 19/53 (35%), Positives = 23/53 (43%)
Frame = -2
Query: 577 HAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRR 419
H P R R RD RS +RS R HR DY RS ++ + RR
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRSPPYSSRHSRSRR 189
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.58
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 158 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 247
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 29.1 bits (62), Expect = 0.58
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 155 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDASSVSPR 310
FL+GG++A + T P E +K Q+Q ++K + + YK + A S+ R
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIAR 79
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 149 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 238
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
Score = 25.8 bits (54), Expect = 5.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +1
Query: 313 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKK 438
+G+ +RG ++ Y P+ ++ F +K K +F GV+KK
Sbjct: 65 EGIAGLYRGVGPMMLGYLPSWSIYFVVYEKCKVLF--GVNKK 104
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.5 bits (58), Expect = 1.8
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +1
Query: 586 GLGNCISKIFKSDGLIGLYRG 648
G+ + + ++KS+GL+GL+RG
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRG 303
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 26.2 bits (55), Expect = 4.1
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -2
Query: 559 YRHRRRDGYVRSRGGTRSTERWLRRHHRRPD--YQRSNARTASSCQHRR 419
YR R R +RS +R +HRR D Y RSN R +HRR
Sbjct: 326 YRQYYNSNRDRKRSSSRSDDR---EYHRRSDGRYDRSNYR--DDYRHRR 369
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 5.4
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 580 FSGLGNCISKIFKSDGLIGLYRG 648
F + +C K++GL GLYRG
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRG 72
Score = 25.4 bits (53), Expect = 7.2
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = +1
Query: 283 RRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 417
R CF K +GL +RG +I +++++F D K F
Sbjct: 54 RSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLKLTF 98
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 267 WSAAICLLTCCTWSSSLTRSMGATAV 190
WSA I +LT C SLT S+ T +
Sbjct: 543 WSADIIMLTYCQDGISLTHSLKLTDI 568
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = +1
Query: 289 CFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 414
C +I + GLL FW G + R + + F +K ++
Sbjct: 246 CAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEI 287
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 262 RPALQGYRRCFVRIPKEQGLLSFWRGNFANV 354
R + GY+R + +P +G++ R +F N+
Sbjct: 1566 RTRITGYKRRLLGVPVSKGVIDTSRAHFTNM 1596
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,369,638
Number of Sequences: 5004
Number of extensions: 42277
Number of successful extensions: 187
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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