Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0266
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 113 2e-25
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 51 9e-07
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 49 4e-06
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 47 1e-05
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 45 6e-05
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 39 0.003
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.003
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 38 0.005
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 38 0.007
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 36 0.038
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.050
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 35 0.050
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.050
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.066
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.087
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.12
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.27
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.35
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.62
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 31 0.62
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 0.62
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.1
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 1.9
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7) 29 2.5
SB_45236| Best HMM Match : PRP38 (HMM E-Value=0) 29 4.3
SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 28 5.7
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 28 5.7
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 28 5.7
SB_28918| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 113 bits (271), Expect = 2e-25
Identities = 66/137 (48%), Positives = 79/137 (57%), Gaps = 3/137 (2%)
Frame = +1
Query: 247 QADRRRPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGG 426
+A R +G C R + +G LSFWRGN AN IRYFPTQALNFAFKD+ K +F
Sbjct: 45 KAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLANCIRYFPTQALNFAFKDQVKALF--- 101
Query: 427 VDKKTQFWRY-FXXXXXXXXXXXXTSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGN 597
KKT F SL FVY LD+ RTRLA D VGK G+R+F+G+ +
Sbjct: 102 KPKKTDSNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMID 161
Query: 598 CISKIFKSDGLIGLYRG 648
K SDGL+GLYRG
Sbjct: 162 VYKKTIASDGLVGLYRG 178
Score = 52.0 bits (119), Expect = 4e-07
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +2
Query: 143 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDASSVSPRSR- 316
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D +S + RS
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 317 -VSFHSG 334
+SF G
Sbjct: 69 FLSFWRG 75
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 50.8 bits (116), Expect = 9e-07
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Frame = +1
Query: 232 STARQQADRRRPALQ--GYRRCF---VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFK 396
S R +D R P Q GY F R+ KE+G+L+ WRG +R A A
Sbjct: 17 SLIRMTSDGRLPPEQRRGYTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATY 76
Query: 397 DKYKQVFLGGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQR 576
+ KQ+ L + +F S+ P+D A+TR+ ++ DG+
Sbjct: 77 SQAKQLLLSTKYFEDNIVCHFGASMISGLATTVASM----PVDIAKTRI-QNMRIIDGKP 131
Query: 577 EFSGLGNCISKIFKSDGLIGLYRG 648
E+ G + +++I +++G+ L++G
Sbjct: 132 EYKGTMDVLARIVRNEGVFALWKG 155
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/55 (38%), Positives = 34/55 (61%)
Frame = +1
Query: 247 QADRRRPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 411
Q + P +G ++I KE+G+L +++GN NVIR FP A+ FA ++YK+
Sbjct: 63 QIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSAVQFAAYEEYKK 117
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/30 (66%), Positives = 27/30 (90%)
Frame = +2
Query: 149 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 238
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ 65
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +2
Query: 116 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 292
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 293 S 295
+
Sbjct: 61 T 61
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 48.8 bits (111), Expect = 4e-06
Identities = 39/119 (32%), Positives = 56/119 (47%)
Frame = +1
Query: 292 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXX 471
F + +E G+ S WRGN ANVI+ P + F +K K+ L G D K
Sbjct: 180 FKMMLREGGIKSLWRGNGANVIKIAPESGIKFFAYEKAKK--LVGSDTKALGVTDRLLAG 237
Query: 472 XXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
TS +YPL+ +TRLA + GQ + GL + S I++ +G+ YRG
Sbjct: 238 SMAGVASQTS---IYPLEVLKTRLAI---RKTGQ--YRGLLHAASVIYQKEGIRSFYRG 288
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/117 (28%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +1
Query: 301 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXXX 480
I +++G+ SF+RG F +++ P ++ A + K +L ++
Sbjct: 276 IYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETLKNFYLNYHKNQSADPGVLVLLACGT 335
Query: 481 XXXXXTSLCFVYPLDFARTRLAADVG-KGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
L YPL RTRL A KG GQ + + + + KI DG GLYRG
Sbjct: 336 ASSTCGQLAS-YPLSLVRTRLQAQAREKGGGQGD--NMVSVLRKIITEDGFKGLYRG 389
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +2
Query: 164 GGISAAVSKTAVAPIERVKLLLQVQ 238
GG A VS+TA AP++R+K+LLQVQ
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ 167
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 47.2 bits (107), Expect = 1e-05
Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 1/128 (0%)
Frame = +1
Query: 268 ALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQF 447
A G R F + K +G+ +FW+GN + IR FP A+ +A ++ + ++
Sbjct: 93 AKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYAAFNR----IVASLEDPHNG 148
Query: 448 WRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAAD-VGKGDGQREFSGLGNCISKIFKSD 624
++ VYP + +TRL V K + + G+ + + I + +
Sbjct: 149 ELSDSGSMLAGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA--HYKGMRHALKTILREE 206
Query: 625 GLIGLYRG 648
G++ LY+G
Sbjct: 207 GILALYKG 214
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2
Query: 137 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQV 235
+ + + FL GG SA ++++ +P+E VK+L QV
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV 88
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 158 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGI 283
LAG S ++ V P E +K L VQHV+K ++ YKG+
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGM 195
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 44.8 bits (101), Expect = 6e-05
Identities = 35/119 (29%), Positives = 51/119 (42%)
Frame = +1
Query: 292 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXX 471
F I + +GLL++++GN A ++R FP A+ F + Y +V Q
Sbjct: 17 FRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKVL--------QTSSPAINKL 68
Query: 472 XXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
T+ YPLD R+RLA V + G + CIS K G LY+G
Sbjct: 69 VAGSLAGMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCIS--VKEGGPKALYKG 125
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Frame = +1
Query: 298 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXXX 477
R K +G+ ++G A V+ P A++F K++ L +K+ +Y+
Sbjct: 111 RTVKTEGVRGLYKGMLAPVLVAAPVTAVSFYSLSIGKRLQLSDPNKEPTMVQYYNAGVFC 170
Query: 478 XXXXXXTSLCFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRG 648
+ F+Y R + V K G + + GLG+C+ +++++ GL G+++G
Sbjct: 171 G-----VCVSFIYA-PTERVKCLLQVQKESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 200 APIERVKLLLQVQHVSKQIAADQRYKGIVD 289
AP ERVK LLQVQ K+ RY+G+ D
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGD 205
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 39.1 bits (87), Expect = 0.003
Identities = 32/136 (23%), Positives = 50/136 (36%)
Frame = +1
Query: 241 RQQADRRRPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 420
R QAD R G + I + +G+ W+G F N+ R D K +FL
Sbjct: 151 RFQADAGRYT-SGTMGTYAEIARNEGMKGLWKGVFPNMARLCTVNVTELVVYDSIKGLFL 209
Query: 421 GGVDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNC 600
+K F + C P+D +TR SG+ +C
Sbjct: 210 ----RKQWMADEFPLHFVSAFGAGFVTTCVASPVDVVKTRYM----NSPANTYKSGI-DC 260
Query: 601 ISKIFKSDGLIGLYRG 648
++FK +G+ Y+G
Sbjct: 261 AVQLFKHNGIFAYYKG 276
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 131 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA 262
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMAS 53
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 496 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
T VYP+D +TR+ + ++ + +C K+ +++G IGLYRG
Sbjct: 926 TGATAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRG 976
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 496 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
T+ V PLD +TRL + + G+ ++G+ +C KI+ ++GL Y+G
Sbjct: 218 TASVAVNPLDVIKTRLQL-LNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKG 267
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 496 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
T+ YPLD R RLA +++++GL N ++I++ +G+ YRG
Sbjct: 2 TAALLTYPLDMVRARLAI-----TQKKKYTGLINAFTRIYRDEGMRTFYRG 47
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +1
Query: 502 LCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
+C +P ++ +T+L D + + + G +C+ K K G++GLYRG
Sbjct: 55 ICCTFPTEYVKTQLQLD--EKAAKPIYRGPIDCVKKTVKGHGVLGLYRG 101
Score = 31.1 bits (67), Expect = 0.81
Identities = 26/129 (20%), Positives = 51/129 (39%)
Frame = +1
Query: 262 RPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKT 441
+P +G C + K G+L +RG + + P ++ FA + K K T
Sbjct: 76 KPIYRGPIDCVKKTVKGHGVLGLYRGLSSLLYGSVPKASVRFAVFEYLKNKMADENGKLT 135
Query: 442 QFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKS 621
Q F ++ V P++ + + D + ++ G + + I K+
Sbjct: 136 Q----FQTLASGLGAGVSEAVVVVCPMETIKVKFIHD--QTQPNPKYKGFFSGVRTILKT 189
Query: 622 DGLIGLYRG 648
+G G+Y+G
Sbjct: 190 EGFFGVYKG 198
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 514 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
YPLD R R+ + +G+G ++S + I +S+G IGL++G
Sbjct: 700 YPLDVVRRRMQME--RGEGMFKYSSTWDGFKVIVRSEGFIGLFKG 742
Score = 34.3 bits (75), Expect = 0.087
Identities = 12/38 (31%), Positives = 26/38 (68%)
Frame = +1
Query: 298 RIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 411
+I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 600 KIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
Score = 29.9 bits (64), Expect = 1.9
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +1
Query: 577 EFSGLGNCISKIFKSDGLIGLYRG 648
++SG+G ++KI++ +GL G ++G
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKG 613
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 35.1 bits (77), Expect = 0.050
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +1
Query: 307 KEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG-GVDKKTQFWRYFXXXXXXXX 483
K +G+ +F+RG A+ + T ++F ++ K L + F
Sbjct: 883 KAEGIRAFYRGLTASYVGISET-VVHFTIYERLKAELLKLHYKSRRDFHVVECMLAAGIS 941
Query: 484 XXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
TSLC YP + ARTRL + G++++ + + + +G GLY G
Sbjct: 942 KCIATSLC--YPHEVARTRLRQQESEFLGRQKYRSFFQTLGTVLREEGWRGLYGG 994
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 496 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSD-GLIGLYRG 648
T+ YPLD R+RLA V + + G+ + +IF ++ G++ LYRG
Sbjct: 11 TACSCTYPLDIVRSRLAFQVA---DEHTYCGICQTVKQIFMTEGGMVALYRG 59
Score = 31.5 bits (68), Expect = 0.62
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 496 TSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL-IGLYRG 648
TS YPLD R R+ DG + +S N ++ DG+ GLYRG
Sbjct: 119 TSQTLAYPLDVVRRRMQLAGTVADGHK-YSTCINTFISVYTEDGIRRGLYRG 169
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 34.3 bits (75), Expect = 0.087
Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 1/120 (0%)
Frame = +1
Query: 292 FVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXX 471
F +I K++G L W G V R D K + L + +
Sbjct: 160 FYKIAKKEGFLGLWTGMKPTVKRAACISGTQIPTYDHTKHLLLNAELMREGVALHLASAL 219
Query: 472 XXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQR-EFSGLGNCISKIFKSDGLIGLYRG 648
+ C P+D RTR G+ + G +CI K + +G++ LY+G
Sbjct: 220 VAGF----VATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKG 275
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/120 (23%), Positives = 49/120 (40%)
Frame = +1
Query: 289 CFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXX 468
CF +I + +G+ +RG ++ P + F+ K L V K + R
Sbjct: 86 CFFKIIRNEGVYYLFRGVTVPILNSIPNTTVLFSCVSFVKSYKLP-VSKDPELLRSLAAG 144
Query: 469 XXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYRG 648
TS PLD R + + K G + G +C+ +I++ G+ G+Y+G
Sbjct: 145 MIAGVA---TSFVLT-PLD--RVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKG 198
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +1
Query: 301 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 414
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 295 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFW 450
++IP+ +GL S WRG ++ P + F D+ K + G + +T W
Sbjct: 68 IKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK-ISYGFKNNETNLW 118
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 32.7 bits (71), Expect = 0.27
Identities = 32/137 (23%), Positives = 56/137 (40%), Gaps = 5/137 (3%)
Frame = +1
Query: 253 DRRRPALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF-AFKDKYKQVFLGG- 426
+ ++ A G C ++ +GL +RG R P AL F +F+ + + G
Sbjct: 291 ETKQMAYTGSLDCLKKVFHSEGLRGCFRGMAITTTRDIPAFALYFGSFQYVCELLTPKGE 350
Query: 427 -VDKKTQFWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAAD--VGKGDGQREFSGLGN 597
VD + +F T YP+D ++ AD G Q +++G +
Sbjct: 351 HVDNLSPIRLFFSGGIAGTLSWILT-----YPVDMVKSCYQADGRTNSGKPQYKYNGYAD 405
Query: 598 CISKIFKSDGLIGLYRG 648
C+ KI+ S G+ +G
Sbjct: 406 CVKKIYISGGVSAFGQG 422
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 277 GYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQA 378
GY C +I G+ +F +G A ++R FPT A
Sbjct: 402 GYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 32.3 bits (70), Expect = 0.35
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 301 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 414
+P+E +L W G ++VI F A+N F+D+YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 514 YPLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 648
+PLD + RL G++ F+G +C K +++G GLY+G
Sbjct: 45 HPLDTIKVRLQTMPRPKPGEKPMFTGTFDCAMKTIRNEGFFGLYKG 90
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 274 QGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGGVDKKT 441
+G C + KE+G+ +F+R + P Q L+F + ++ LGG D KT
Sbjct: 33 RGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGGYDPKT 90
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.5 bits (68), Expect = 0.62
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 167 GISAAVSKTAVAPIERVKLLLQVQH 241
G+S +KT AP+ER+K+L Q Q+
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN 87
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 31.5 bits (68), Expect = 0.62
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -3
Query: 177 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 43
A++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 517 PLDFARTRLAADVGKGDGQRE-FSGLGNCISKIFKSDGLIGLYRG 648
PLD + RL A G+ F G +C K + +GL GLY+G
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/125 (20%), Positives = 52/125 (41%)
Frame = +1
Query: 274 QGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWR 453
+G CF++ + +GL ++G + ++ P+ AL F K++ L ++ +
Sbjct: 63 KGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTALTFYSLSVGKRIQLSDPYQEPTLVQ 122
Query: 454 YFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI 633
Y S F P + + L + G + SG + +I+ +G+
Sbjct: 123 Y---GNAGLFCGFCVSFLFA-PAERIKCILQVEAGASGSTQ--SGPYAIVKRIYAEEGVR 176
Query: 634 GLYRG 648
G++RG
Sbjct: 177 GIFRG 181
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 177 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 43
A++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +2
Query: 113 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 283
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 284 VD 289
D
Sbjct: 79 KD 80
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 1.9
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 161 AGGISAAVSKTAVAPIERVKLLLQ 232
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 553 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 431
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_43597| Best HMM Match : TP2 (HMM E-Value=1.7)
Length = 272
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 590 RPENSRWPSPLPTSAARRVRAKSRGYTK 507
RP +SR S P+SA+RR ++SRG +
Sbjct: 221 RPSSSRPSSARPSSASRRASSRSRGLAR 248
>SB_45236| Best HMM Match : PRP38 (HMM E-Value=0)
Length = 381
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = -2
Query: 556 RHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTASSCQHRRGTPACT 401
R R RD RSR R + RR R +RS R S +HR + +CT
Sbjct: 321 RSRSRDRR-RSRSRERRRDDRKRRSRERSPKRRSREREESRSRHRGRSNSCT 371
>SB_24707| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 921
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = -1
Query: 380 SAWVGKYLMTLAKLPRQNERRPCSLGIRTKHRRYPCNAG 264
+AW K LA+ P R PC L T R YP G
Sbjct: 575 AAWGPKRSGCLAREPSTAPRLPCDLVAATSARMYPAGQG 613
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 304 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 420
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +1
Query: 301 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 417
+P+E L + G ++VI F A+N F+++YK+VF
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVF 301
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 301 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 414
+P+E +L + G ++VI F A+N FK++YK++
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKI 304
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = -2
Query: 550 RRRDGYVRSRGGTRSTERWLRRHHR-RPDYQRSNARTASSCQHRRGTP 410
R+ + R +GG R+T+ ++H R +PD +R+ R R+GTP
Sbjct: 865 RKVEERARHKGGNRATQEREKKHRRNQPDKRRTQMRIP-----RKGTP 907
>SB_28918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 319
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 265 PALQGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 414
P ++ R R+P+E + G ++ I F A+N AF+ ++K +
Sbjct: 243 PVIEAVRMFHGRLPREVFVFYSVMGGVSSAINVFIYHAMNSAFRAEFKAI 292
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,977,610
Number of Sequences: 59808
Number of extensions: 373917
Number of successful extensions: 1363
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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