Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0266
(650 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 199 7e-53
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 198 2e-52
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 198 2e-52
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 24 3.6
AJ459959-1|CAD31058.1| 462|Anopheles gambiae dopachrome convers... 23 8.4
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 199 bits (485), Expect = 7e-53
Identities = 91/125 (72%), Positives = 100/125 (80%)
Frame = +1
Query: 274 QGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWR 453
+G CFVRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWR
Sbjct: 54 KGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWR 113
Query: 454 YFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI 633
YF TSLCFVYPLDFARTRL ADVG+G G+REF+GL +C+ K KSDG+I
Sbjct: 114 YFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGRGAGEREFNGLLDCLKKTVKSDGII 173
Query: 634 GLYRG 648
GLYRG
Sbjct: 174 GLYRG 178
Score = 96.7 bits (230), Expect = 6e-22
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +2
Query: 116 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAS 295
M+ ADP FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ SKQIA D++YKGIVD
Sbjct: 1 MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60
Query: 296 SVSPRSR 316
P+ +
Sbjct: 61 VRIPKEQ 67
Score = 30.7 bits (66), Expect = 0.042
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 289 CFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 408
C+V+I K++G +F++G F+NV+R AL F D+ K
Sbjct: 259 CWVKIGKQEGSGAFFKGAFSNVLR-GTGGALVLVFYDEVK 297
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 198 bits (482), Expect = 2e-52
Identities = 91/125 (72%), Positives = 99/125 (79%)
Frame = +1
Query: 274 QGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWR 453
+G CFVRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWR
Sbjct: 54 KGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWR 113
Query: 454 YFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI 633
YF TSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K KSDG+I
Sbjct: 114 YFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGII 173
Query: 634 GLYRG 648
GLYRG
Sbjct: 174 GLYRG 178
Score = 96.7 bits (230), Expect = 6e-22
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +2
Query: 116 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAS 295
M+ ADP FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ SKQIA D++YKGIVD
Sbjct: 1 MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60
Query: 296 SVSPRSR 316
P+ +
Sbjct: 61 VRIPKEQ 67
Score = 30.7 bits (66), Expect = 0.042
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 289 CFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 408
C+V+I K++G +F++G F+NV+R AL F D+ K
Sbjct: 259 CWVKIGKQEGSGAFFKGAFSNVLR-GTGGALVLVFYDEVK 297
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 198 bits (482), Expect = 2e-52
Identities = 91/125 (72%), Positives = 99/125 (79%)
Frame = +1
Query: 274 QGYRRCFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWR 453
+G CFVRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWR
Sbjct: 54 KGIVDCFVRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWR 113
Query: 454 YFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLI 633
YF TSLCFVYPLDFARTRL ADVG G G+REF+GL +C+ K KSDG+I
Sbjct: 114 YFLGNLGSGGAAGATSLCFVYPLDFARTRLGADVGPGAGEREFNGLLDCLKKTVKSDGII 173
Query: 634 GLYRG 648
GLYRG
Sbjct: 174 GLYRG 178
Score = 96.7 bits (230), Expect = 6e-22
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = +2
Query: 116 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAS 295
M+ ADP FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ SKQIA D++YKGIVD
Sbjct: 1 MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60
Query: 296 SVSPRSR 316
P+ +
Sbjct: 61 VRIPKEQ 67
Score = 30.7 bits (66), Expect = 0.042
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +1
Query: 289 CFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 408
C+V+I K++G +F++G F+NV+R AL F D+ K
Sbjct: 259 CWVKIGKQEGSGAFFKGAFSNVLR-GTGGALVLVFYDEVK 297
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 24.2 bits (50), Expect = 3.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -2
Query: 508 STERWLRRHHRRPDYQRSNARTASSCQ 428
+ +RWLR HH + ++ SS Q
Sbjct: 698 AVDRWLREHHLELAHAKTEMTVISSLQ 724
>AJ459959-1|CAD31058.1| 462|Anopheles gambiae dopachrome conversion
enzyme protein.
Length = 462
Score = 23.0 bits (47), Expect = 8.4
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 373 QALNFAFKDKYKQVFLGGVDKKTQF 447
Q +NFA+ D + LG D T+F
Sbjct: 237 QGINFAWDDGIFSIALGNPDPVTKF 261
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,128
Number of Sequences: 2352
Number of extensions: 11814
Number of successful extensions: 31
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -