Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0264
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    24   3.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.3  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   7.3  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   9.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   9.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   9.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   9.6  

>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 215 RVTVKGGGHVAQVYAIRQAISKALIAFYQKYV-DEASKKEI 334
           RV     G VA V A+ + I+ A   FY KYV D+  +K I
Sbjct: 140 RVFGISSGCVAFVMALERYIALAKPFFYHKYVTDKLIRKSI 180


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +1

Query: 148 AAVQTSRANPFARQGKILHGRHQSDSQGWW----SCSTSLRYPTSYFKGSD 288
           A  Q  R +   R  K LH      SQGW+    +    +R+P  Y +G D
Sbjct: 1   ARPQRPRLSVTCRPTKCLHPLRTGRSQGWYMHGRNTLRQMRWPPCY-RGPD 50


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 462 KPSGGIVAASCCHCDIIGWCTIKNIKSF 545
           KP  G+   S  H D++  C I  +  F
Sbjct: 776 KPERGLKKGSGLHMDVVLLCVINTVCGF 803


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
 Frame = +2

Query: 260 IRQAISK---ALIAFYQKYVDEASKKEIK 337
           ++Q +SK   AL +F ++ +DE ++ E+K
Sbjct: 95  VKQEVSKRCKALASFMEELMDEVAQPELK 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,045
Number of Sequences: 2352
Number of extensions: 12830
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)