Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0263
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   4.9  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    24   4.9  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   6.4  

>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/22 (36%), Positives = 17/22 (77%)
 Frame = +1

Query: 34  SYRNTVPPAANAPNQRNHILYT 99
           S+++T+ PAA   N ++++LY+
Sbjct: 403 SWKDTIDPAACNSNPKDYLLYS 424


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 474 LDSGDNTRDVWNILDNSRDVVSTIKALQ 391
           LD  D T+ VW + + +    +TIK L+
Sbjct: 78  LDGSDGTKYVWRLPNQAYHPKNTIKTLK 105


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -2

Query: 43   CGTSTGGPAPAAP 5
            C  ST  PAPAAP
Sbjct: 1305 CSASTSEPAPAAP 1317


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 162 HYVLCFRES*NLHNRILLRAGVRG 233
           H V  FR+   LH+   LR G+RG
Sbjct: 5   HTVHWFRKGLRLHDNPALREGLRG 28


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,281
Number of Sequences: 2352
Number of extensions: 13009
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)