Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0262
(710 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 296 4e-79
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 280 2e-74
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 248 8e-65
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 126 7e-28
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 120 3e-26
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 119 8e-26
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 114 2e-24
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 109 5e-23
UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3; Eukaryo... 95 2e-18
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 88 2e-16
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 79 8e-14
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 77 6e-13
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 70 7e-11
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 66 1e-09
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 55 2e-06
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 52 1e-05
UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725... 48 3e-04
UniRef50_Q7QNU1 Cluster: GLP_157_10563_10210; n=1; Giardia lambl... 43 0.006
UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing prot... 33 6.9
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 296 bits (726), Expect = 4e-79
Identities = 138/204 (67%), Positives = 155/204 (75%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 213
MGAYRY+QELYRKK SDVMR+LLR+RVWQYRQLT++HR+PRPTRPDKARRLGYRAKQ
Sbjct: 1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFV 60
Query: 214 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 393
TYGKPKSHGVNQLKP R LQSIAEE +SYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYW 120
Query: 394 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRY 573
+AQD+SYKYFEVIL+D H AIRRDPKINWI VHKHRE+RGLTSAG+SSRG+GKG+RY
Sbjct: 121 IAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGIGKGYRY 180
Query: 574 SQTKGGSRRAAWLKRNTLQLRRKR 645
SQT GGSRRAAW ++N + RKR
Sbjct: 181 SQTIGGSRRAAWKRKNREHMHRKR 204
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 280 bits (687), Expect = 2e-74
Identities = 133/204 (65%), Positives = 149/204 (73%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 213
MGAY+YIQEL+RKK SDVMRFLLRVR WQYRQL+ +HRAPRPTRPDKARRLGY+AKQ
Sbjct: 1 MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV 60
Query: 214 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 393
ATYGKP HGVNQLK R+LQS+AEE +SYW
Sbjct: 61 IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERAGRHCGALRVLNSYW 120
Query: 394 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRY 573
V +DS+YK+FEVIL+DP HKAIRR+P WI VHKHREMRGLTSAGR SRGLGKGH++
Sbjct: 121 VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF 180
Query: 574 SQTKGGSRRAAWLKRNTLQLRRKR 645
T GGSRRAAW +RNTLQL R R
Sbjct: 181 HHTIGGSRRAAWRRRNTLQLHRYR 204
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 248 bits (608), Expect = 8e-65
Identities = 112/204 (54%), Positives = 141/204 (69%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 213
MGAY+Y+QE++RKK SD +R+LLR+R W YRQL+ +HR PRPTRP+KARRLGYRAKQ
Sbjct: 1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFV 60
Query: 214 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 393
TYGKPK+HGVN+LK ++ Q++AE +SYW
Sbjct: 61 VYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYW 120
Query: 394 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRY 573
VA+DS+YK++EV+L+DP HKAIRR+P WI VHKHRE RGLTSAGR SRGLGKG R+
Sbjct: 121 VAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGLGKGWRF 180
Query: 574 SQTKGGSRRAAWLKRNTLQLRRKR 645
S T+GGS+ W ++NT RKR
Sbjct: 181 SATRGGSQAKNWKRKNTKVFHRKR 204
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 126 bits (303), Expect = 7e-28
Identities = 72/180 (40%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 213
MG Y+YI+E ++ + LL+ R+ ++R+ + R RPTR D+AR LGY+AKQ
Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPSVVRIERPTRLDRARALGYQAKQGYI 60
Query: 214 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 393
KP G + P ++LQ IAEE +SYW
Sbjct: 61 IVRVRVRRGGRKRPRWKGGR--KPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYW 118
Query: 394 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGL---GKG 564
V +D YK+FEVI+VDP H I+ DPKI WI HK R RGLTSAG+ RGL GKG
Sbjct: 119 VGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKG 178
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 120 bits (290), Expect = 3e-26
Identities = 73/203 (35%), Positives = 107/203 (52%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 213
+ Y YI++ ++ K D R +LR R+ ++R+ + R RPTR ++AR LGY+AKQ
Sbjct: 3 LSMYHYIEQTWQNK--DWRRSILRKRLIEWRRQPAITRIDRPTRLNRARALGYKAKQGFV 60
Query: 214 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 393
+PK GV P++ + IAEE SY+
Sbjct: 61 MVRVRVRRGGLNKPRPNSGR--RPKRMGVYGYGPSKGYRWIAEERAARKFPNLEVLGSYY 118
Query: 394 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRY 573
VA+D YKY+EVI+VD SH IR DP++ W+ ++V++ R RGLTSAG+ SRGL K
Sbjct: 119 VAEDGMYKYYEVIMVDYSHPVIRSDPELKWLQDSVNRKRVFRGLTSAGQKSRGLTKSR-- 176
Query: 574 SQTKGGSRRAAWLKRNTLQLRRK 642
KG +R K+ QL+R+
Sbjct: 177 -GLKGTVQRKWKKKQKERQLKRR 198
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 119 bits (286), Expect = 8e-26
Identities = 70/208 (33%), Positives = 103/208 (49%)
Frame = +1
Query: 22 QAAKMGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAK 201
Q+ G Y +++E +++ L++ R+ ++R+ + R +PTR D+AR LGY+AK
Sbjct: 19 QSMARGLYHFLREQWKRPFDGEHGELMKQRIIKWRREPAVVRIEKPTRLDRARALGYKAK 78
Query: 202 QXXXXXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXX 381
Q +PK GV P ++ + IAEE
Sbjct: 79 QGVVVVRVRVRKGGLNRPRPNKGR--RPKRMGVYGYAPAKSTRLIAEERAARKYPGLEVL 136
Query: 382 SSYWVAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGK 561
+SYWVA+D Y+++EVILVDP H AI DP++ WI H+ R RG TSAGR RGL K
Sbjct: 137 NSYWVAEDGEYEWYEVILVDPHHPAICSDPELKWICEKQHRGRVFRGKTSAGRKMRGLLK 196
Query: 562 GHRYSQTKGGSRRAAWLKRNTLQLRRKR 645
S+ G+ W K+ + RKR
Sbjct: 197 ----SRGLRGTHNYKWKKKEKERKLRKR 220
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 114 bits (275), Expect = 2e-24
Identities = 68/177 (38%), Positives = 89/177 (50%), Gaps = 3/177 (1%)
Frame = +1
Query: 43 YRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXX 222
Y +I+E + + L R +R+ + R RPTR DKAR LGY+AKQ
Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVR 65
Query: 223 XXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQ 402
+ K GVN++ +NLQ IAEE +SYWV +
Sbjct: 66 VSVRKGTARKSRFKAGR--RTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGE 123
Query: 403 DSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGL---GKG 564
D S K+FE IL+DP H AI+ D +NWI + HK+R RG TSAGR +RGL GKG
Sbjct: 124 DGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKG 180
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 109 bits (263), Expect = 5e-23
Identities = 63/187 (33%), Positives = 96/187 (51%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXX 213
MG RY+ ++++K D +R +++ R+ ++R+ + R +PTR DKAR+ GY+AKQ
Sbjct: 1 MGTLRYVADIWKKPYEDPLRQVIKARLIKWRREPAILRVDKPTRIDKARKYGYKAKQGVV 60
Query: 214 XXXXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYW 393
T +PK GV + + NLQ +AE+ SYW
Sbjct: 61 VVRVRVRRGPFNRRRPN--TGRRPKRMGVYGVALSTNLQVVAEQRAARRFSNLEVLGSYW 118
Query: 394 VAQDSSYKYFEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGLGKGHRY 573
V +D+ YK+FEV+++DPSH AIR DP W+V ++RE R + R L + R
Sbjct: 119 VGEDAMYKWFEVVMIDPSHPAIRNDPDYAWVVG--KEYREGRRIRRIRERQRKLIERLR- 175
Query: 574 SQTKGGS 594
Q GGS
Sbjct: 176 KQASGGS 182
>UniRef50_P41961 Cluster: 60S ribosomal protein L15; n=3;
Eukaryota|Rep: 60S ribosomal protein L15 - Brugia
pahangi (Filarial nematode worm)
Length = 71
Score = 94.7 bits (225), Expect = 2e-18
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 204
MGAYRY+QEL+RKK S+ MR+LLR+R WQYRQLT +HR RPTRP+KARRLGY + +
Sbjct: 1 MGAYRYMQELWRKKKSETMRYLLRIRCWQYRQLTAIHRVSRPTRPEKARRLGYLSNE 57
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/76 (53%), Positives = 51/76 (67%), Gaps = 1/76 (1%)
Frame = +1
Query: 421 FEVILVDPSHKAIRRDPKINWIVNAVHKHREMRGLTSAGRSSRGL-GKGHRYSQTKGGSR 597
FE+ILVD +H AIR D +INW+ VHKH E+ GLTSAG RGL GKGH + + + S
Sbjct: 363 FEIILVDVAHSAIRDDLRINWLCKPVHKHGELHGLTSAGNKYRGLRGKGHTHHKARPSSP 422
Query: 598 RAAWLKRNTLQLRRKR 645
RA W + T+ LRR R
Sbjct: 423 RATWKRNQTVSLRRYR 438
Score = 70.1 bits (164), Expect = 5e-11
Identities = 35/57 (61%), Positives = 41/57 (71%)
Frame = +1
Query: 34 MGAYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQ 204
MGAYR + EL+R+K SDVM F+ RVR W +R R RPTRPDKARRLG +AKQ
Sbjct: 1 MGAYRCVSELWRRKQSDVMTFVQRVRCWDHR---RQPAIGRPTRPDKARRLGDKAKQ 54
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 79.4 bits (187), Expect = 8e-14
Identities = 44/127 (34%), Positives = 73/127 (57%)
Frame = -3
Query: 567 MSLAETSGAATSRSQTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILCNPV 388
++L++ A +R Q THL++L+ DP+ +R++++ + ++EDNL+ + I NPV
Sbjct: 4 VALSKAMALAANRCQPTHLSVLVDWFGDPLGVRLSSDSFMEWINEDNLKKFICEIFTNPV 63
Query: 387 RAQHXXXXXXXXXTFLSNGLKVARGLQLVDTMALGLAISGTLSNWTLAATTSHTDSEYNI 208
Q +FLSN LK + +QLV+T+ LAIS TL W + TT+ T+ +
Sbjct: 64 GIQDSQSSTMVPSSFLSNRLKASGKVQLVNTVVNRLAISCTLRKWAFSTTTADTNPVKDT 123
Query: 207 TLFSTVA 187
TL S V+
Sbjct: 124 TLLSLVS 130
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 76.6 bits (180), Expect = 6e-13
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 1/163 (0%)
Frame = +1
Query: 40 AYRYIQELYRKKLSDVMRFLLRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXX 219
AY Y+ YRK +V L+R + ++R+ + R RP R ++AR+LGY+AKQ
Sbjct: 5 AYSYMAMWYRKIGREVHERLMRKILIEWRKAPAIVRVERPFRLERARKLGYKAKQGVVVV 64
Query: 220 XXXXXXXXXXXXXXXXATYGKPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVA 399
+PK GV + ++ + +AEE +SYWVA
Sbjct: 65 RVRLMRGPFNRRRPDSGR--RPKRMGVYGITAWKSWRQVAEERAARKHPNLEVLNSYWVA 122
Query: 400 QDSSYKYFEVILVDPSHKAIRRDPKINWIV-NAVHKHREMRGL 525
D Y+YFEVIL+D + I+ DP + I V + R +R L
Sbjct: 123 DDGIYRYFEVILIDCNLPTIKNDPLYSGICGREVPRRRIIRRL 165
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 69.7 bits (163), Expect = 7e-11
Identities = 42/132 (31%), Positives = 63/132 (47%)
Frame = +1
Query: 100 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXXXXXXXXXXXXXXXXXATYG 279
+R RV +R+ + R RPTR D+AR LGY+AKQ
Sbjct: 20 IRDRVIIWRKQNAVTRIERPTRIDRARSLGYKAKQGIVVVRMRVGTGGMRRQRPRGGR-- 77
Query: 280 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 459
+PK GV ++K +++ +A SY+V +D +Y +FEVIL DPSH +
Sbjct: 78 RPKHLGVTRIKADVSMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSHPRV 137
Query: 460 RRDPKINWIVNA 495
+DP++ V A
Sbjct: 138 AKDPELRDRVGA 149
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/126 (29%), Positives = 60/126 (47%)
Frame = +1
Query: 100 LRVRVWQYRQLTRMHRAPRPTRPDKARRLGYRAKQXXXXXXXXXXXXXXXXXXXXXATYG 279
LR RV +R+ + R +P+R +ARRLGY+AKQ
Sbjct: 59 LRERVVGWRKQNAVTRIDKPSRIQRARRLGYKAKQGVIVVRMRVGTGGMRKQRPTGGR-- 116
Query: 280 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 459
+PK GV ++K N++++AE SY++ +D + +FEVIL DP H +
Sbjct: 117 RPKHLGVTRIKADDNMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRV 176
Query: 460 RRDPKI 477
+D ++
Sbjct: 177 AQDKEL 182
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = -3
Query: 630 LKSVAFEPSCPA*ASLCLRVSMSLAETSGAATSRSQTTHLTMLMYSIHDPVDLRIATNGL 451
L+S+A SC A + + M+L++ + R Q THL +L+ DP+ +RI+++
Sbjct: 4 LESIAPSLSCLARTTSSVVELMALSKARALSACRCQPTHLPVLVEWFDDPLGVRISSDSF 63
Query: 450 V*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXTFLSNGLKVARGL 310
+ ++EDNL + I NPVR Q + L NGLK + L
Sbjct: 64 MEWINEDNLRKFLCGIFTNPVRIQDAQSPMVASSSLLCNGLKASSKL 110
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = +1
Query: 280 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXXSSYWVAQDSSYKYFEVILVDPSHKAI 459
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 460 RRDPKIN 480
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_O23581 Cluster: Putative uncharacterized protein dl4725w;
n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
protein dl4725w - Arabidopsis thaliana (Mouse-ear cress)
Length = 520
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = -3
Query: 603 CPA*ASLCLRVSMSLAETSGAATSRSQTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNL 424
CPA S+ + V +T+ + +T+ ++L++ + DPVD I ++G+V RV++DNL
Sbjct: 438 CPAGRSVLVVVVTLSTKTTILLSFGGETSEFSVLVHRVADPVDPWIISDGIVCRVYKDNL 497
Query: 423 EILV*RILCNP 391
+LV R+L P
Sbjct: 498 VVLVGRVLRKP 508
>UniRef50_Q7QNU1 Cluster: GLP_157_10563_10210; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_10563_10210 - Giardia lamblia
ATCC 50803
Length = 117
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/66 (37%), Positives = 36/66 (54%)
Frame = -3
Query: 576 RVSMSLAETSGAATSRSQTTHLTMLMYSIHDPVDLRIATNGLV*RVHEDNLEILV*RILC 397
R + ET+G AT R +T L L + DP++L I + V R+ E++L LV +L
Sbjct: 35 RTDTLVVETAGLATGRGETATLAALHDRVADPINLWIVADPRVERIDENDLVPLVGPVLG 94
Query: 396 NPVRAQ 379
NPV Q
Sbjct: 95 NPVGIQ 100
>UniRef50_A5DWM5 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 465
Score = 33.1 bits (72), Expect = 6.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = -3
Query: 264 LSNWTLAATTSHTDSEYNITLFSTVA*SSGFVRPCGPGSAVHTSQLTVLPYPHTQQKTHN 85
LSN+T AAT ++T++ N VA ++ P S VH+ L+ PH T
Sbjct: 69 LSNYTFAATNNNTNNRNNTITAKGVAPANAANAPIAVSSKVHSPALSEHQNPHFTTNTPR 128
Query: 84 I 82
+
Sbjct: 129 V 129
>UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing protein
C19orf7; n=20; Theria|Rep: Zinc finger CCCH
domain-containing protein C19orf7 - Homo sapiens (Human)
Length = 1303
Score = 33.1 bits (72), Expect = 6.9
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 496 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSR 597
++++R + +S GR SRG G+G+R ++GGSR
Sbjct: 224 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 257
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 723,267,153
Number of Sequences: 1657284
Number of extensions: 14442973
Number of successful extensions: 37048
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 35598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37027
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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