Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0261
(666 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 2.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 3.0
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 22 3.9
EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450 ... 22 5.2
AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory recept... 22 5.2
AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory recept... 22 5.2
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 22 5.2
EF592538-1|ABQ95984.1| 582|Tribolium castaneum beta-N-acetylglu... 21 6.9
EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport pe... 21 6.9
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 21 6.9
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 9.1
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -2
Query: 635 YD-HGRWKQSSGHEGTSAHP 579
YD HG+W++ +GH P
Sbjct: 279 YDFHGKWERETGHNAPLYSP 298
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/16 (50%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = -2
Query: 644 VEQYD-HGRWKQSSGH 600
V YD HG+W+++ GH
Sbjct: 705 VMTYDFHGQWERTVGH 720
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
Frame = -2
Query: 644 VEQYD-HGRWKQSSGHEGT 591
V YD HG W++ +GH T
Sbjct: 831 VMTYDYHGAWERQTGHNFT 849
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/16 (50%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
Frame = -2
Query: 644 VEQYD-HGRWKQSSGH 600
V YD HG+W + +GH
Sbjct: 1587 VMTYDFHGQWDKQTGH 1602
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 584 VRWSPHGHYFASSGH 628
V WSP GH A S H
Sbjct: 85 VGWSPAGHEEAQSPH 99
>EU008544-1|ABS31131.1| 493|Tribolium castaneum cytochrome P450
protein.
Length = 493
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 63 DFGFFIKRLSFFAFFFL 13
DF I+ +S F+FFF+
Sbjct: 206 DFKSVIRSISVFSFFFM 222
>AM292339-1|CAL23151.2| 387|Tribolium castaneum gustatory receptor
candidate 18 protein.
Length = 387
Score = 21.8 bits (44), Expect = 5.2
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCL 547
+FG S K+ P K + T + L SL W L
Sbjct: 16 IFGLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFIL 55
>AM292338-1|CAL23150.2| 372|Tribolium castaneum gustatory receptor
candidate 17 protein.
Length = 372
Score = 21.8 bits (44), Expect = 5.2
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCL 547
+FG S K+ P K + T + L SL W L
Sbjct: 16 IFGLSPMTQKLTLSPLKVLQTVILGTTCIYLTSLYIWFIL 55
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = -1
Query: 594 DQRTSQTGHTCPRYTTRHVQHC 529
D G TC +TT + HC
Sbjct: 66 DSSPCLNGATCQDHTTHYTCHC 87
>EF592538-1|ABQ95984.1| 582|Tribolium castaneum
beta-N-acetylglucosaminidase NAG3 protein.
Length = 582
Score = 21.4 bits (43), Expect = 6.9
Identities = 8/21 (38%), Positives = 9/21 (42%)
Frame = +1
Query: 565 RMAGLGCALVPSWPLLCFQRP 627
R+ G WPL C Q P
Sbjct: 559 RLKSRGIRTAAIWPLWCSQNP 579
>EF222298-1|ABN79658.1| 120|Tribolium castaneum ion transport
peptide isoform B protein.
Length = 120
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 154 CFSECFAFLYFI 119
C SECF+ YF+
Sbjct: 85 CRSECFSTKYFV 96
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 21.4 bits (43), Expect = 6.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 525 DHNLTVVSSEHESSIVLKGSN 463
DHNLT + E S+V K S+
Sbjct: 124 DHNLTTLCQELGISVVQKVSH 144
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 386 RVHHLLPCLYLVVF 345
R+ L+PC+YL F
Sbjct: 27 RLEKLVPCVYLTSF 40
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,029
Number of Sequences: 336
Number of extensions: 3954
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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