Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0261
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   1.2  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   1.2  
CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal pe...    25   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.1  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   3.7  
DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.       24   5.0  
AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative odorant-b...    24   5.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   8.7  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 102 GRGI-LSLGGAFGSDFGFFIKRLSFFAFF 19
           G GI LSLGGA G D    IKR SF + F
Sbjct: 568 GGGIGLSLGGAAGVDGSRRIKRRSFASKF 596


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 17/29 (58%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -1

Query: 102 GRGI-LSLGGAFGSDFGFFIKRLSFFAFF 19
           G GI LSLGGA G D    IKR SF + F
Sbjct: 569 GGGIGLSLGGAAGVDGSRRIKRRSFASKF 597


>CR954256-8|CAJ14149.1|  247|Anopheles gambiae putative signal
           peptidase protein.
          Length = 247

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
 Frame = +3

Query: 519 CGHY-SVGRVLLCTVDTYGRSGMCAGPLMATTLLPAAMIV 635
           CG+    G +  CT +  G   +C GP M  TL+   +++
Sbjct: 12  CGYIVQYGCITHCTFEYLGDFVVCVGPSMEPTLMTNNVLI 51


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 17/79 (21%), Positives = 27/79 (34%)
 Frame = -2

Query: 608 SGHEGTSAHPRPAIRVHGTQQDTSNTVVTTISQLYPQSTKAALF*KDQMQLYKRGRSAQK 429
           S H  T A P   I    +     +    + +  +P  T AA+     + L  +      
Sbjct: 744 SPHPATRASPSSPIVATSSSGGGGSNTPNSAAAPHPYYTAAAMAAASPLSLSSKAPPHPH 803

Query: 428 GCGTYHGPFPPSSSRVHHL 372
              + H P    S  +HHL
Sbjct: 804 SALSSHSPVGAGSHHLHHL 822


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -2

Query: 392 SSRVHHLLPCLYLVVFLQISFLAV*WESMSIPLCL 288
           ++RVH LL    +  +  IS +AV   +  +P+CL
Sbjct: 782 ANRVHRLLAMRVVRAYKTISHVAVCVIASMVPICL 816


>DQ974172-1|ABJ52812.1|  409|Anopheles gambiae serpin 13 protein.
          Length = 409

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +2

Query: 182 SLPSICFYTLLNSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTP 316
           +LPS+ F +  ++G +        D+T+LA+  + SN+ V+ L P
Sbjct: 183 ALPSVSFRSGFSTGFSKAL-----DATILALPGSTSNVSVFFLKP 222


>AJ618918-1|CAF01997.1|  228|Anopheles gambiae putative
           odorant-binding protein OBPjj2 protein.
          Length = 228

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -3

Query: 454 INGAGVPKKVAARITVLFLHHPHEYITCFPVYI 356
           + G  VPK  A      FL  P  ++TC   +I
Sbjct: 61  LKGPPVPKNAAECCVTPFLVEPSAFMTCHSKWI 93


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 56  PKSDPNAPPNDRIPLP 103
           P + P  PP DR P P
Sbjct: 790 PSNAPFTPPTDRTPTP 805


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,215
Number of Sequences: 2352
Number of extensions: 15955
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)