Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0261
(666 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 144 5e-35
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 71 9e-13
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 62 3e-10
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 62 4e-10
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 59 2e-09
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 59 2e-09
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 59 3e-09
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 59 3e-09
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 59 3e-09
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 58 4e-09
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 58 5e-09
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 58 5e-09
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 58 5e-09
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 58 7e-09
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 58 7e-09
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 57 9e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 56 2e-08
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 56 2e-08
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 56 3e-08
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 54 9e-08
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 54 1e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 53 2e-07
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 51 8e-07
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 50 1e-06
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 50 1e-06
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 50 1e-06
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 50 2e-06
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 50 2e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 49 2e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 49 3e-06
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 48 4e-06
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 48 4e-06
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 48 6e-06
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 47 1e-05
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 46 2e-05
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 46 2e-05
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 46 2e-05
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 46 3e-05
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 46 3e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 46 3e-05
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 46 3e-05
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 45 4e-05
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 45 5e-05
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 45 5e-05
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 44 7e-05
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 44 7e-05
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 44 1e-04
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 44 1e-04
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 44 1e-04
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 44 1e-04
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 44 1e-04
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 44 1e-04
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 43 2e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 43 2e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 43 2e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 43 2e-04
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 43 2e-04
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 43 2e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 43 2e-04
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 43 2e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 42 3e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 42 3e-04
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 42 4e-04
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 42 4e-04
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 42 4e-04
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 42 4e-04
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 42 5e-04
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 42 5e-04
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 41 6e-04
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 41 6e-04
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 41 6e-04
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 40 0.001
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 40 0.001
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.002
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 39 0.003
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 39 0.003
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 39 0.003
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 39 0.003
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 39 0.003
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 39 0.003
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 39 0.003
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 39 0.003
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 38 0.005
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 38 0.005
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 38 0.005
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 38 0.006
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 38 0.006
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 38 0.008
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 37 0.010
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 37 0.010
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 37 0.010
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 37 0.014
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 37 0.014
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 36 0.018
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 36 0.024
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 36 0.024
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 36 0.024
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 36 0.032
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 36 0.032
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 36 0.032
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.042
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.042
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 35 0.056
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 34 0.074
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 34 0.098
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 34 0.098
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 34 0.098
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 34 0.098
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 34 0.098
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 34 0.098
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 33 0.13
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 33 0.13
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 33 0.13
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 33 0.13
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 33 0.13
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 33 0.17
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 33 0.17
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 33 0.17
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 33 0.23
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 33 0.23
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 33 0.23
At2g19540.1 68415.m02283 transducin family protein / WD-40 repea... 33 0.23
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 32 0.30
At2g31300.1 68415.m03821 transducin family protein / WD-40 repea... 32 0.30
At2g30910.2 68415.m03768 transducin family protein / WD-40 repea... 32 0.30
At2g30910.1 68415.m03767 transducin family protein / WD-40 repea... 32 0.30
At1g64350.1 68414.m07292 transducin family protein / WD-40 repea... 32 0.30
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 32 0.39
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 32 0.39
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 32 0.39
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 31 0.52
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 31 0.52
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 31 0.52
At3g56900.1 68416.m06329 aladin-related / adracalin-related weak... 31 0.52
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 31 0.52
At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4... 31 0.52
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 31 0.52
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 31 0.69
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 31 0.91
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 31 0.91
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 31 0.91
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 0.91
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 31 0.91
At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase fa... 30 1.2
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 30 1.2
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 30 1.2
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 30 1.6
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 30 1.6
At4g29360.2 68417.m04195 glycosyl hydrolase family 17 protein si... 30 1.6
At4g29360.1 68417.m04194 glycosyl hydrolase family 17 protein si... 30 1.6
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 30 1.6
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 30 1.6
At1g03420.1 68414.m00322 expressed protein similar to gb|T45484,... 30 1.6
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 27 2.0
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 29 2.1
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 29 2.1
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 29 2.8
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 29 2.8
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 29 2.8
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 29 3.7
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 29 3.7
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 28 4.9
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 4.9
At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG... 28 6.4
At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG... 28 6.4
At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG... 28 6.4
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 28 6.4
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 28 6.4
At2g21830.1 68415.m02594 DC1 domain-containing protein contains ... 28 6.4
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 28 6.4
At5g42840.1 68418.m05221 DC1 domain-containing protein contains ... 27 8.5
At3g52550.1 68416.m05782 hypothetical protein 27 8.5
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 27 8.5
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 27 8.5
At1g20630.1 68414.m02581 catalase 1 identical to catalase 1 GI:2... 27 8.5
At1g18310.1 68414.m02288 glycosyl hydrolase family 81 protein si... 27 8.5
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 144 bits (349), Expect = 5e-35
Identities = 75/173 (43%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Frame = +2
Query: 143 LREASKRVQLGPDSLPSICFYTLLNSGHTAISCD-ICDDSTLLAVGFNNSNIKVWTLTPI 319
L + RVQL ++PS+ FYT +N+ H ++C I D +L+A GF++S+IKVW + I
Sbjct: 326 LEDLRNRVQLSSVAMPSVSFYTFVNT-HNGLNCSSISHDGSLVAGGFSDSSIKVWDMAKI 384
Query: 320 KLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCS 499
G + LQ + ++ D + + R + L GHSGPVY F P +LS S
Sbjct: 385 ---GQAGSGALQ-AENDSSD---QSIGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSS 437
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
DTT+RLWS + LV Y+GH +PVWD ++SP GHYFAS HDRTAR+W+ D
Sbjct: 438 ADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMD 490
Score = 62.9 bits (146), Expect = 2e-10
Identities = 32/93 (34%), Positives = 45/93 (48%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV 550
+ D +R+ K GH+ PV+ F PF SCS D T R+WS+ L
Sbjct: 437 SADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSMDRIQPLR 496
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ GH + DV W P+ +Y A+ D+T RLW
Sbjct: 497 IMAGH---LSDVDWHPNCNYIATGSSDKTVRLW 526
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV 550
+ D VR+ + + + R GH V +A P + S ED T+ +W L C+
Sbjct: 518 SSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCIT 577
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
GH VW + +S G AS D T +LW
Sbjct: 578 PLMGHNSCVWSLSYSGEGSLLASGSADCTVKLW 610
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/70 (34%), Positives = 35/70 (50%)
Frame = +2
Query: 440 SGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFAS 619
+G + V + P + + S D TVRLW +Q C+ ++ GH V + SP G Y AS
Sbjct: 499 AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMAS 558
Query: 620 SGHDRTARLW 649
D T +W
Sbjct: 559 GDEDGTIMMW 568
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCL 547
L GH+ V+ +++ ++L S S D TV+LW + T L
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKL 618
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 70.5 bits (165), Expect = 9e-13
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GHS VY +AF + SC D+ R+W L+ ++V++GH+ PV+ V +SP+G++
Sbjct: 379 GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHL 438
Query: 614 ASSGHDRTARLW 649
AS G D R+W
Sbjct: 439 ASGGEDNQCRIW 450
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D L R+ + + + GH PV+ V F P L S ED R+W L+ L +
Sbjct: 402 DSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYII 461
Query: 557 RGHVWPVWDVRWSP-HGHYFASSGHDRTARLWA 652
H V V++ P G++ A++ +D +W+
Sbjct: 462 PAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 494
Score = 46.0 bits (104), Expect = 2e-05
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 419 CRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL-QCWTCLVVYRGHVWPVWDVRWS 595
C N FG P+ +F +L +CS +LW + Q + V + H DV +S
Sbjct: 249 CSN-FGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFS 307
Query: 596 PHGHYFASSGHDRTARLWATD 658
P A++ DRTA+LW TD
Sbjct: 308 PVDDCLATASADRTAKLWKTD 328
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +2
Query: 413 DTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRW 592
+T L H V F P L + S D T +LW T L + GH+ + V +
Sbjct: 289 NTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTD-GTLLQTFEGHLDRLARVAF 347
Query: 593 SPHGHYFASSGHDRTARLW 649
P G Y ++ +D+T RLW
Sbjct: 348 HPSGKYLGTTSYDKTWRLW 366
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/72 (34%), Positives = 35/72 (48%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH + +VAF P L + S D T RLW + L++ GH V+ + + G
Sbjct: 337 GHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALA 396
Query: 614 ASSGHDRTARLW 649
AS G D AR+W
Sbjct: 397 ASCGLDSLARVW 408
Score = 34.3 bits (75), Expect = 0.074
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLS-CSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
H+ V +V ++P + L+ S D V +WS + ++ + GH V + +
Sbjct: 464 HANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCI 523
Query: 614 ASSGHDRTARLWAT 655
A+ HDRT +LW +
Sbjct: 524 ATVSHDRTIKLWTS 537
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWS 526
D+ V + +D ++L GH V + + + + S D T++LW+
Sbjct: 487 DMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 62.1 bits (144), Expect = 3e-10
Identities = 29/76 (38%), Positives = 41/76 (53%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L GH+ V + + P +ML S S D TV +W+++ C V RGH+ V V W P G
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGS 173
Query: 608 YFASSGHDRTARLWAT 655
+ AS D+T +W T
Sbjct: 174 FIASQSDDKTVIIWRT 189
Score = 36.7 bits (81), Expect = 0.014
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 536 WTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
W ++ RGH V D+ WSP AS D T +W
Sbjct: 108 WKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIW 145
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWP-------VWDV 586
L GH V V +DP + + S S+D TV +W W GH W +
Sbjct: 156 LRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSDWGMAHRTDGH-WAKSLGSTFFRRL 214
Query: 587 RWSPHGHYFASS 622
WSP GH+ ++
Sbjct: 215 GWSPCGHFLTTT 226
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 61.7 bits (143), Expect = 4e-10
Identities = 28/72 (38%), Positives = 41/72 (56%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH GPVY+V++ +LLS S+D+T+++W ++ GH V+ V WSP G
Sbjct: 400 GHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKV 459
Query: 614 ASSGHDRTARLW 649
S G DR +LW
Sbjct: 460 VSGGKDRVLKLW 471
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/76 (36%), Positives = 37/76 (48%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
+ L GH V V F P + S S D +VRLW+ + V+RGHV PV+ V WS
Sbjct: 354 KRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSAD 413
Query: 602 GHYFASSGHDRTARLW 649
S D T ++W
Sbjct: 414 SRLLLSGSKDSTLKIW 429
Score = 51.2 bits (117), Expect = 6e-07
Identities = 29/76 (38%), Positives = 35/76 (46%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
+ + GH+ V V+F P L S S DTTVRLW L T L +GH V V WSP
Sbjct: 103 QTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPD 162
Query: 602 GHYFASSGHDRTARLW 649
G + S W
Sbjct: 163 GKHLVSGSKSGEICCW 178
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 488 LSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
++ S+D R+W + ++ GH V V+W G + S D T ++W T
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGIIYTGS-QDCTIKMWET 269
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 542 CLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
C GH V V +SP G AS D T RLW
Sbjct: 101 CSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLW 136
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 59.3 bits (137), Expect = 2e-09
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 296 KVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF 475
K + +T + +R K + Q + A D+ +R+ D + HS + VA P
Sbjct: 51 KSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPT 110
Query: 476 KTMLLSCSEDTTVRLWSLQ-CWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGHDRTARLW 649
+LS S+D ++LW + W C ++ GH V V ++P + FAS+ DRT ++W
Sbjct: 111 LPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIW 170
Score = 36.7 bits (81), Expect = 0.014
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
K L++ S+D T ++W Q +C+ GH V V + P + D T R+W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
D ++ + + + + L GH+ V V F P ++++ SED TVR+W
Sbjct: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 59.3 bits (137), Expect = 2e-09
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Frame = +2
Query: 254 DSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDT-CRNL 430
D LA G + +K+W +T + + I+++A VL +T + L
Sbjct: 209 DGKYLATGGEDGVVKIWRITLSDSLLASFLRQQEPINQQAALVLFPQKAFHIEETPFQEL 268
Query: 431 FGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGH 607
+GH+G V +A+ +LLS S+D TVRLW C CL V+ H V V ++P + +
Sbjct: 269 YGHTGDVLDLAWSD-SNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKN 326
Query: 608 YFASSGHDRTARLW 649
FAS D AR+W
Sbjct: 327 NFASGSIDGKARIW 340
Score = 35.5 bits (78), Expect = 0.032
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 560 GHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
GH +W +++SP G Y A+ G D ++W
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 560 GHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
GH V D+ WS + S+ D+T RLW T
Sbjct: 270 GHTGDVLDLAWSD-SNLLLSASKDKTVRLWRT 300
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
GH G ++ + F P L + ED V++W +
Sbjct: 196 GHKGKIWTLKFSPDGKYLATGGEDGVVKIWRI 227
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
+++ + ++ R L GH V F PF S S DT +++W ++ C+ Y+GH
Sbjct: 176 IKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 235
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
V +R++P G + S G D ++W
Sbjct: 236 TRGVNVLRFTPDGRWIVSGGEDNVVKVW 263
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
+L+GHS + V FD + ++ + + T++LW L+ + GH V + P G
Sbjct: 147 SLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFG 206
Query: 605 HYFASSGHDRTARLW 649
+FAS D ++W
Sbjct: 207 EFFASGSLDTNLKIW 221
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/91 (21%), Positives = 40/91 (43%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D +++ + + + GH+ V + F P ++S ED V++W L L +
Sbjct: 215 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF 274
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ H + + + PH A+ D+T + W
Sbjct: 275 KSHEGKIQSLDFHPHEFLLATGSADKTVKFW 305
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ 532
H G + + F P + +L + S D TV+ W L+
Sbjct: 277 HEGKIQSLDFHPHEFLLATGSADKTVKFWDLE 308
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 58.8 bits (136), Expect = 3e-09
Identities = 41/157 (26%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Frame = +2
Query: 221 GHTA-ISC-DICDDSTLLAVGFNNSNIKVWTLTPIKL--RGMKSAEKLQDID-------- 364
GHTA ISC +D LLA + + +W+ T L R + + D+
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYT 100
Query: 365 -REAGDVLVRMMEEKDRDTC-RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCW 538
+ D +R+ + + C + L GH+ V+ V F+P +++S S D T+R+W ++
Sbjct: 101 CSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG 160
Query: 539 TCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
C+ + + H P+ V ++ G S+ HD + ++W
Sbjct: 161 KCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIW 197
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
+ L GH+ + V F +L S S D T+ LWS ++ + Y GH + D+ WS
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSD 96
Query: 602 GHYFASSGHDRTARLW 649
HY S+ D T R+W
Sbjct: 97 SHYTCSASDDCTLRIW 112
Score = 40.7 bits (91), Expect = 9e-04
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D +R+ E K R + HS P+ V F+ ++++S S D + ++W + TCL
Sbjct: 149 DETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTL 208
Query: 557 RGHVWP-VWDVRWSPHGHYFASSGHDRTARL 646
P V ++SP+G + + D T +L
Sbjct: 209 IDDKSPAVSFAKFSPNGKFILVATLDSTLKL 239
Score = 39.1 bits (87), Expect = 0.003
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +2
Query: 434 GHSGPVYKV--AFDPFK-TMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
GH+ V+ + AF ++S SED V LW LQ L GH V V P
Sbjct: 253 GHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQ 312
Query: 605 HYFASSGH--DRTARLWATD 658
+ +SSG+ D+T R+W D
Sbjct: 313 NEISSSGNHLDKTIRIWKQD 332
Score = 31.1 bits (67), Expect = 0.69
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 4/91 (4%)
Frame = +2
Query: 389 RMMEEKDRDTCRNLFGHSGPVYKVA-FDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
++ + K+ + L P A F P +L + D+T++L + L VY GH
Sbjct: 195 KIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGH 254
Query: 566 VWPVWDVRWS---PHGHYFASSGHDRTARLW 649
V+ + + +G Y S D LW
Sbjct: 255 TNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 58.8 bits (136), Expect = 3e-09
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 293 IKVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDP 472
+K + +T + +R K + Q + A D+ +R+ D + H+ + VA P
Sbjct: 50 VKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHP 109
Query: 473 FKTMLLSCSEDTTVRLWSLQ-CWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGHDRTARL 646
+LS S+D ++LW + W C ++ GH V V ++P + FAS+ DRT ++
Sbjct: 110 TLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKI 169
Query: 647 W 649
W
Sbjct: 170 W 170
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
K L++ S+D T ++W Q +C+ GH V V + P + D T R+W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
D ++ + + + + L GH+ V V+F P ++++ SED TVR+W
Sbjct: 208 DHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/93 (27%), Positives = 44/93 (47%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV 550
A ++++ + ++ R GH V F PF L S S DT +R+W + C+
Sbjct: 26 ASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQ 85
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
Y+GH + + +SP G + S G D ++W
Sbjct: 86 TYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVW 118
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
+L GH+ PV VAF+ + ++L+ + ++LW L+ + + GH V + P G
Sbjct: 2 SLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFG 61
Query: 605 HYFASSGHDRTARLWAT 655
+ AS D R+W T
Sbjct: 62 EFLASGSSDTNLRVWDT 78
Score = 41.9 bits (94), Expect = 4e-04
Identities = 34/156 (21%), Positives = 64/156 (41%), Gaps = 13/156 (8%)
Frame = +2
Query: 221 GHTAISCDICDDS--TLLAVGFNNSNIKVWTLTPIKL-------RGMKSAEKLQDIDR-- 367
GHT+ + +S L+ G ++ IK+W L K+ R SA +
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 368 --EAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT 541
+ D +R+ + + + + GH+ + + F P ++S D V++W L
Sbjct: 65 ASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGK 124
Query: 542 CLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
L ++ H P+ + + P A+ DRT + W
Sbjct: 125 LLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFW 160
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
H GP+ + F P + +L + S D TV+ W L+ + + R V + + P G
Sbjct: 132 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDG 187
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 296 KVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF 475
K + +T + +R K + Q + A D+ +R+ D + HS + VA P
Sbjct: 51 KSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPT 110
Query: 476 KTMLLSCSEDTTVRLWSLQ-CWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGHDRTARLW 649
+LS S+D ++LW + W C ++ GH V V ++P + FAS+ DRT ++W
Sbjct: 111 LPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIW 170
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
K L++ S+D T ++W Q +C+ GH V V + P + D T R+W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
D ++ + + + + L GH+ V V F P ++++ SED TVR+W
Sbjct: 208 DHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 296 KVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF 475
K + +T + +R K + Q + A D+ +R+ D + HS + VA P
Sbjct: 51 KSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPT 110
Query: 476 KTMLLSCSEDTTVRLWSLQ-CWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGHDRTARLW 649
+LS S+D ++LW + W C ++ GH V V ++P + FAS+ DRT ++W
Sbjct: 111 LPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIW 170
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
K L++ S+D T ++W Q +C+ GH V V + P + D T R+W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
D ++ + + + + L GH+ V V F P ++++ SED TVR+W
Sbjct: 208 DHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 58.0 bits (134), Expect = 5e-09
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 2/120 (1%)
Frame = +2
Query: 296 KVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF 475
K + +T + +R K + Q + A D+ +R+ D + HS + VA P
Sbjct: 51 KSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPT 110
Query: 476 KTMLLSCSEDTTVRLWSLQ-CWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGHDRTARLW 649
+LS S+D ++LW + W C ++ GH V V ++P + FAS+ DRT ++W
Sbjct: 111 LPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIW 170
Score = 35.9 bits (79), Expect = 0.024
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
K L++ S+D T ++W Q +C+ GH V V + P + D T R+W
Sbjct: 199 KPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
D ++ + + + + L GH+ V V F P ++++ SED TVR+W
Sbjct: 208 DHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIW 256
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
+++ + ++ R L GH V F PF S S DT +++W ++ C+ Y+GH
Sbjct: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
V +R++P G + S G D ++W
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
+L+GHS + V FD + ++ + + T++LW L+ + GH V + P G
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 605 HYFASSGHDRTARLW 649
+FAS D ++W
Sbjct: 114 EFFASGSLDTNLKIW 128
Score = 45.6 bits (103), Expect = 3e-05
Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Frame = +2
Query: 215 NSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDRE-------- 370
+SG +++ D + L+A G + IK+W L K+ + + I +
Sbjct: 59 SSGIDSVTFDASE--VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 371 -AG--DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT 541
+G D +++ + + + GH+ V + F P ++S ED V++W L
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Query: 542 CLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
L ++ H + + + PH A+ DRT + W
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ 532
H G + + F P + +L + S D TV+ W L+
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 57.6 bits (133), Expect = 7e-09
Identities = 25/88 (28%), Positives = 44/88 (50%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
+++ + ++ R L GH V F PF S S DT +++W ++ C+ Y+GH
Sbjct: 83 IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGH 142
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
V +R++P G + S G D ++W
Sbjct: 143 TRGVNVLRFTPDGRWVVSGGEDNIVKVW 170
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
+L+GHS + V FD + ++ + + T++LW L+ + GH V + P G
Sbjct: 54 SLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFG 113
Query: 605 HYFASSGHDRTARLW 649
+FAS D ++W
Sbjct: 114 EFFASGSLDTNLKIW 128
Score = 45.6 bits (103), Expect = 3e-05
Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 11/156 (7%)
Frame = +2
Query: 215 NSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDRE-------- 370
+SG +++ D + L+A G + IK+W L K+ + + I +
Sbjct: 59 SSGIDSVTFDASE--VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFF 116
Query: 371 -AG--DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT 541
+G D +++ + + + GH+ V + F P ++S ED V++W L
Sbjct: 117 ASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK 176
Query: 542 CLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
L ++ H + + + PH A+ DRT + W
Sbjct: 177 LLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFW 212
Score = 29.5 bits (63), Expect = 2.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ 532
H G + + F P + +L + S D TV+ W L+
Sbjct: 184 HEGQIQSLDFHPHEFLLATGSADRTVKFWDLE 215
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 57.2 bits (132), Expect = 9e-09
Identities = 24/93 (25%), Positives = 45/93 (48%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV 550
A ++++ + ++ R GH V F PF L S S D +++W ++ C+
Sbjct: 77 ASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQ 136
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
Y+GH + +R++P G + S G D ++W
Sbjct: 137 TYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVW 169
Score = 44.4 bits (100), Expect = 7e-05
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Frame = +2
Query: 176 PDSLPSICFYTLLNSGHTAISCDICDDST--LLAVGFNNSNIKVWTLTPIKL-------R 328
P SL S+C GHT+ + DS L+ G ++ IK+W + K+ R
Sbjct: 48 PTSLMSLC-------GHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHR 100
Query: 329 GMKSAEKLQDIDR----EAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSC 496
SA + + D +++ + + + + GHS + + F P ++S
Sbjct: 101 SNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSG 160
Query: 497 SEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
D V++W L L ++ H P+ + + P A+ DRT + W
Sbjct: 161 GLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFW 211
Score = 36.7 bits (81), Expect = 0.014
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
H GP+ + F P + +L + S D TV+ W L+ + + R V +++ P G
Sbjct: 183 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDG 238
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 9/100 (9%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D ++ + + + + GH G V V +DP ++L SCS+D+T ++W+++ T +
Sbjct: 427 DSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDL 486
Query: 557 RGHVWPVWDVRWSPHGH---------YFASSGHDRTARLW 649
R H ++ +RWSP G AS+ D T +LW
Sbjct: 487 REHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLW 526
Score = 50.4 bits (115), Expect = 1e-06
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +2
Query: 485 LLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
L S S D+TV+LW + L + GH PV+ + +SP+G Y AS D++ +W+
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH PVY +AF P + S S D ++ +WS++ + Y G+ +++V W+ G+
Sbjct: 539 GHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKI 597
Query: 614 ASSGHDRT 637
A+ D +
Sbjct: 598 AACFADNS 605
Score = 37.9 bits (84), Expect = 0.006
Identities = 29/145 (20%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = +2
Query: 221 GHTA--ISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRM 394
GHT+ +C ++LLA G ++ ++W++ + + + R ++++
Sbjct: 263 GHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTG-------RNINALILKH 315
Query: 395 MEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWP 574
+ K + ++ V + ++ T+L + S D R+W+L + H P
Sbjct: 316 AKGKSNEKSKD-------VTTLDWNGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGP 367
Query: 575 VWDVRWSPHGHYFASSGHDRTARLW 649
++ ++W+ G Y + DRTA +W
Sbjct: 368 IFSLKWNKKGDYLLTGSVDRTAVVW 392
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRG 562
R L GH+ V A+ P ++L S S D T R+WS+ + V+ G
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTG 305
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H GP++ + ++ LL+ S D T +W ++ + H P DV W + +
Sbjct: 364 HKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFAT 423
Query: 617 SS 622
SS
Sbjct: 424 SS 425
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
+ GH V WSP AS D TAR+W+
Sbjct: 260 ILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 56.0 bits (129), Expect = 2e-08
Identities = 28/91 (30%), Positives = 45/91 (49%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D +++ + + + L GH+ + V F+P M++S S D TVR+W + CL V
Sbjct: 92 DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL 151
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
H PV V ++ G SS +D R+W
Sbjct: 152 PAHSDPVTAVDFNRDGSLIVSSSYDGLCRIW 182
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/72 (27%), Positives = 35/72 (48%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH + VAF ++S S+D T++LW ++ + + GH + V ++P +
Sbjct: 69 GHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 614 ASSGHDRTARLW 649
S D T R+W
Sbjct: 129 VSGSFDETVRIW 140
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +2
Query: 485 LLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
++S SED V +W L L GH V +V P + AS D+T R+W
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVV-----YRGHVWPVWDV 586
+ L H+ V V F +L S S D T+R +++ + + GH + DV
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 587 RWSPHGHYFASSGHDRTARLW 649
+S + S+ D+T +LW
Sbjct: 78 AFSSDARFIVSASDDKTLKLW 98
Score = 35.1 bits (77), Expect = 0.042
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWS 526
D V M E + + L GH+ V VA P + ++ S S D TVR+W+
Sbjct: 264 DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313
Score = 34.3 bits (75), Expect = 0.074
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 15/163 (9%)
Frame = +2
Query: 206 TLLNSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEK----LQDIDREA 373
TL+ + A + S ++ G + +++W +T K + A D +R+
Sbjct: 108 TLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG 167
Query: 374 G-------DVLVRMMEEKDRDTCRNLFGHSGP-VYKVAFDPFKTMLLSCSEDTTVRLWSL 529
D L R+ + + L P V V F P +L + D T+RLW++
Sbjct: 168 SLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNI 227
Query: 530 QCWTCLVVYRGHVWPVWDVRWS---PHGHYFASSGHDRTARLW 649
L Y GHV + + + +G S D +W
Sbjct: 228 SSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 55.6 bits (128), Expect = 3e-08
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Frame = +2
Query: 383 LVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTML-LSCSEDTTVRLWSLQCWTCLVVYR 559
++R+++ ++L GH V ++ P K L ++ S+D +VRLW+++ C++++
Sbjct: 109 IIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFA 168
Query: 560 ---GHVWPVWDVRWSPHGHY-FASSGHDRTARLWA 652
GH + V V + P Y FAS G D T ++W+
Sbjct: 169 GAGGHRYEVLSVDFHPSDIYRFASCGMDTTIKIWS 203
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTM-LLSCSEDTTVRLWSL-QCWT 541
GH V V F P SC DTT+++WS+ + WT
Sbjct: 172 GHRYEVLSVDFHPSDIYRFASCGMDTTIKIWSMKEFWT 209
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/75 (34%), Positives = 37/75 (49%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L H+ + K P L + S D TV++W+L + V GH VWD +S G
Sbjct: 213 LQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGE 272
Query: 608 YFASSGHDRTARLWA 652
Y ++ D TARLW+
Sbjct: 273 YLVTASSDTTARLWS 287
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/76 (31%), Positives = 34/76 (44%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
RN H+ V V F M+ S SED +V++W L+ C +R V PV V P+
Sbjct: 78 RNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPN 136
Query: 602 GHYFASSGHDRTARLW 649
S + R+W
Sbjct: 137 QTELISGDQNGNIRVW 152
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
L GH V+ F L++ S DTT RLWS++ +VY+ H
Sbjct: 255 LTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAH 300
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 53.6 bits (123), Expect = 1e-07
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L H+G + K P L + S D TV++W++ + V GH VWD +S G
Sbjct: 207 LQAHNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGE 266
Query: 608 YFASSGHDRTARLWA 652
+ ++ D TARLW+
Sbjct: 267 FLVTASSDMTARLWS 281
Score = 34.3 bits (75), Expect = 0.074
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
L GH V+ F L++ S D T RLWS+ + VY+GH
Sbjct: 249 LTGHQRWVWDCVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGH 294
Score = 29.5 bits (63), Expect = 2.1
Identities = 21/71 (29%), Positives = 29/71 (40%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H+ V V F + S SED TV++W L+ C Y V V V P+
Sbjct: 77 HTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELI 135
Query: 617 SSGHDRTARLW 649
S + R+W
Sbjct: 136 SGDQNGNIRVW 146
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 52.8 bits (121), Expect = 2e-07
Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 17/174 (9%)
Frame = +2
Query: 179 DSLPSICFYTLLNSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIK-LRGMKSAEK-- 349
DS S T+ T + + D LL ++ I+VW L +K +R K E
Sbjct: 46 DSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPV 105
Query: 350 LQDIDREAGDVLVR-------MMEEKDRDTCRNLF-GHSGPVYKVAFDPF--KTMLLSCS 499
+ +G +L ++ + D C + F GH G V + F P K +L+S S
Sbjct: 106 MGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGS 165
Query: 500 EDTTVRLWSLQCWT----CLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+D TVR+W L CL + H V + S G S+G D+ LW
Sbjct: 166 DDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLW 219
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 11/149 (7%)
Frame = +2
Query: 236 SCDICDDSTLLAVGFNNSNIKVWTLTP----IKLRGMKS---AEKLQDIDR----EAGDV 382
S + + +L+ G + +W L + L+G K + + +D+ +GD
Sbjct: 504 SVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDK 563
Query: 383 LVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRG 562
V++ D + GH+ V + +F T +SC D ++LW++ C+ Y
Sbjct: 564 TVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQ 623
Query: 563 HVWPVWDVRWSPHGHYFASSGHDRTARLW 649
H VW + A+ G D LW
Sbjct: 624 HEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +2
Query: 374 GDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVV 553
GDV + +++ D + G S + +A P +L S +R+W L+ C+
Sbjct: 39 GDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRS 97
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
++GH PV + G A++G DR +W D
Sbjct: 98 WKGHEGPVMGMACHASGGLLATAGADRKVLVWDVD 132
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +2
Query: 482 MLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGHDRTARLWATD 658
++++ S+D TVRLW+ +C+ V GH + V ++ +F S DRT ++W+ D
Sbjct: 418 LIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLD 477
Score = 36.3 bits (80), Expect = 0.018
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H + VA +++ + SED T +W L +V +GH ++ V +S
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 617 SSGHDRTARLWA 652
++ D+T ++WA
Sbjct: 558 TASGDKTVKIWA 569
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 50.8 bits (116), Expect = 8e-07
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKT-------MLLSCSEDTTVRLW---SL-QCWTC-LVVYRGH 565
+ L GH+ V+ VA++P + +L SCS D TVR+W SL + WTC V+ H
Sbjct: 14 QKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETH 73
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
V WSP G A++ D T +W
Sbjct: 74 TRTVRSCAWSPSGQLLATASFDGTTGIW 101
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Frame = +2
Query: 338 SAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVR 517
S L R+ + ++E + D L GH+ V V + P +L SCS D T++
Sbjct: 129 SGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTIK 188
Query: 518 LW-------SLQCWTCL-VVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
+W QC L GH VW + ++ G + D T ++W TD
Sbjct: 189 VWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVTCSDDLTLKIWGTD 243
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL---QCWTCLVVYRGHVWPVWDVRWSP 598
L GH V V+++ + L +CS D +V +W + + C V GH V V+W P
Sbjct: 114 LEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHP 173
Query: 599 HGHYFASSGHDRTARLW 649
S +D T ++W
Sbjct: 174 TMDVLFSCSYDNTIKVW 190
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRD---TCRNLFG--HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQC 535
+GD VR+ E+ TC+ + H+ V A+ P +L + S D T +W
Sbjct: 46 SGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKNYG 105
Query: 536 --WTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ C+ GH V V W+ G A+ D++ +W
Sbjct: 106 SEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIW 145
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +2
Query: 377 DVLVRMMEEKD-RDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVV 553
D LV++ + + R+ C +L GH V V ++ LL+ S+D ++L+ ++ L
Sbjct: 289 DQLVKLWDTRSGRELC-SLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDIRTMKELQS 347
Query: 554 YRGHVWPVWDVRWSP-HGHYFASSGHDRTARLWATDH 661
+RGH V + W P H YF S D + W H
Sbjct: 348 FRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGH 384
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH V V + P K++L+S +D V+LW + L GH V V+W+ +G++
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 614 ASSGHDRTARLW 649
++ D+ +L+
Sbjct: 326 LTASKDQIIKLY 337
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDP-FKTMLLSCSEDTTVRLWSLQCWTCLV- 550
D ++++ + + ++ GH+ V +A+ P + +S S D ++ W + +
Sbjct: 331 DQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIE 390
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ H VWD+ W P G+ S +D T + W
Sbjct: 391 IPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFW 423
Score = 35.1 bits (77), Expect = 0.042
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 19/96 (19%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL-QCW--TCLVVY------------- 556
N H + ++F SCS+DTTV++W +C + L Y
Sbjct: 202 NKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVM 261
Query: 557 ---RGHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
GH W V V W P S G D+ +LW T
Sbjct: 262 PCNAGHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDT 297
Score = 32.7 bits (71), Expect = 0.23
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = +2
Query: 449 VYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGH 628
+ +V + P L++ S+ LW+ Q + ++ + H P+ + WS + +Y S
Sbjct: 126 INRVLWTPSGRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDD 185
Query: 629 DRTARLW 649
T + W
Sbjct: 186 GGTLKYW 192
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
+ L GH VY FD +++ S+D V++WS++ CL RGH + D+ S +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSN 358
Query: 602 GHYFASSGHDRTARLW 649
AS+ +D R+W
Sbjct: 359 NALVASASNDFVIRVW 374
Score = 44.4 bits (100), Expect = 7e-05
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Frame = +2
Query: 320 KLRGMKSAEKLQDIDRE-------AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFK 478
KLRG ++A DR + D LV++ + + GH G + +A
Sbjct: 300 KLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNN 359
Query: 479 TMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG---HYFASSGHDRTARLW 649
++ S S D +R+W L + V RGH V + +SP + SS D T R+W
Sbjct: 360 ALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL--QCWTCLVVYRGHVWPVWDVRWSPH 601
L GH VY + F+P T++ S S D + LW + C +V+ +GH + D+ W+
Sbjct: 49 LSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVL-KGHKNAILDLHWTSD 107
Query: 602 GHYFASSGHDRTARLW 649
G S+ D+T R W
Sbjct: 108 GSQIVSASPDKTVRAW 123
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/98 (20%), Positives = 41/98 (41%), Gaps = 8/98 (8%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT----CLVV 553
V++ + + + L GH + ++ P + LL+ D + +W ++ + C+ +
Sbjct: 204 VKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKI 263
Query: 554 YRGHVWP----VWDVRWSPHGHYFASSGHDRTARLWAT 655
+ GH + WSP G + DR +W T
Sbjct: 264 FEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRL 520
+ D +V + + R T L GH+G V + F P + ++ SCS D + L
Sbjct: 291 SSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKNIYL 340
Score = 31.9 bits (69), Expect = 0.39
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +2
Query: 458 VAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRT 637
V+F + + D V++W L+ + GH + + SP G Y ++G D
Sbjct: 186 VSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNK 245
Query: 638 ARLW 649
+W
Sbjct: 246 LCVW 249
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 545 LVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+++ GH V+ ++++P G AS HDR LW
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLW 80
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 49.6 bits (113), Expect = 2e-06
Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Frame = +2
Query: 245 ICDDSTLLAVGFNNSNIKVWTLTPIK----LRGMKSAEKLQDIDREAGDVLVRMMEEKDR 412
I D+ +AV +S +KV+ + +K L G K DI + G+++V ++K+
Sbjct: 548 ISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSD-GELIVTGSQDKNL 606
Query: 413 --------DTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHV 568
D +++F H V V F L S +D V+ W + L+ GH
Sbjct: 607 KIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHH 666
Query: 569 WPVWDVRWSPHGHYFASSGHDRTARLW 649
+W + S G + + HDR+ R W
Sbjct: 667 AEIWCLAISNRGDFLVTGSHDRSMRRW 693
Score = 46.4 bits (105), Expect = 2e-05
Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 12/148 (8%)
Frame = +2
Query: 257 STLLAVGFNNSNIKVWTLTP----IKLRGMKSAEKLQDIDREAGDVLVRMMEEKD----- 409
S+L+AVG+ + +I++W + K A ++ G +L ++ D
Sbjct: 76 SSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNK-VGSMLASGSKDNDIILWD 134
Query: 410 ---RDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVW 580
L GH V + F L+S S+D +R+W L+ C+ + GH VW
Sbjct: 135 VVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVW 194
Query: 581 DVRWSPHGHYFASSGHDRTARLWATDHH 664
V P Y + D+ R +A +
Sbjct: 195 SVDTDPEERYVVTGSADQELRFYAVKEY 222
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
+L+GH PV + ++++ S+D +++W L C H V V++ +
Sbjct: 577 SLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNT 636
Query: 605 HYFASSGHDRTARLWATD 658
HY S G DR + W D
Sbjct: 637 HYLFSIGKDRLVKYWDAD 654
Score = 32.7 bits (71), Expect = 0.23
Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 12/125 (9%)
Frame = +2
Query: 185 LPSICFYTLLNSGHTAISC-DICDDSTLLAVGFNNSNIKVWTLT-----------PIKLR 328
+ S+ FY L + C DI D L+ G + N+K+W L +
Sbjct: 569 MDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVM 628
Query: 329 GMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDT 508
G+K + D LV+ + + L GH ++ +A L++ S D
Sbjct: 629 GVKFVRNTHYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDR 688
Query: 509 TVRLW 523
++R W
Sbjct: 689 SMRRW 693
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/70 (22%), Positives = 28/70 (40%)
Frame = +2
Query: 449 VYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGH 628
V VA P + D+TV+++ + + GH PV + S G +
Sbjct: 543 VLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQ 602
Query: 629 DRTARLWATD 658
D+ ++W D
Sbjct: 603 DKNLKIWGLD 612
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/91 (28%), Positives = 41/91 (45%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D +++ K L GH + V F ++S S+D T+R+W+ Q TC+ V
Sbjct: 72 DYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRTCISVL 131
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
GH V + P S+ D+T R+W
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H GPV V F + + +S +D +++W+ + CL GH+ + V++ +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIV 109
Query: 617 SSGHDRTARLW 649
S+ D+T R+W
Sbjct: 110 SASDDQTIRIW 120
Score = 41.1 bits (92), Expect = 6e-04
Identities = 32/154 (20%), Positives = 60/154 (38%), Gaps = 3/154 (1%)
Frame = +2
Query: 197 CFYTLLNSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAG 376
C L H + L+ + ++VW + +K + A+ L +
Sbjct: 127 CISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNS 186
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL---QCWTCL 547
D+ + D L GH V +F P +++S ++D V+LW + + W +
Sbjct: 187 DLFGGV----DAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE-V 241
Query: 548 VVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
RGH+ V V + S+ D++ R+W
Sbjct: 242 DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVW 275
Score = 33.1 bits (72), Expect = 0.17
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 383 LVRMMEEK--DRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
L RM E K + DT R GH V V F + +++S SED ++R+W T + +
Sbjct: 230 LWRMNETKAWEVDTLR---GHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTF 286
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHD 631
R W + P + A +GHD
Sbjct: 287 RREHDRFWILAVHPEINLLA-AGHD 310
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
D +R+ + R L GH+ V +F P + +++S S D TVR+W +
Sbjct: 114 DQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 31.9 bits (69), Expect = 0.39
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = +2
Query: 440 SGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFAS 619
S V ++F P + +L+ ++LW + T + + H PV V + F S
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 620 SGHDRTARLWATDHH 664
G D ++W H
Sbjct: 69 GGDDYKIKVWNYKTH 83
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D +++ K+ L GH + V F ++S S+D T+R+W+ Q TC+ V
Sbjct: 72 DYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCVSVL 131
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
GH V + P S+ D+T R+W
Sbjct: 132 TGHNHYVMCASFHPKEDLVVSASLDQTVRVW 162
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/71 (26%), Positives = 36/71 (50%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H GPV V F + + +S +D +++W+ + CL GH+ + V++ +
Sbjct: 50 HEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIV 109
Query: 617 SSGHDRTARLW 649
S+ D+T R+W
Sbjct: 110 SASDDQTIRIW 120
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 3/154 (1%)
Frame = +2
Query: 197 CFYTLLNSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAG 376
C L H + L+ + ++VW + ++ + + A+ + + +
Sbjct: 127 CVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDIMRLTQMNS 186
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL---QCWTCL 547
D+ + D L GH V AF P +++S ++D V+LW + + W +
Sbjct: 187 DLFGGV----DAIVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE-V 241
Query: 548 VVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
RGH+ V V + S+ D++ R+W
Sbjct: 242 DTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVW 275
Score = 34.3 bits (75), Expect = 0.074
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 383 LVRMMEEK--DRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
L RM E K + DT R GH V V F + +++S SED ++R+W T L +
Sbjct: 230 LWRMNETKAWEVDTLR---GHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTF 286
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHD 631
R W + P + A +GHD
Sbjct: 287 RREHDRFWILAVHPEMNLLA-AGHD 310
Score = 33.1 bits (72), Expect = 0.17
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = +2
Query: 440 SGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFAS 619
S V ++F P + +L+ ++LW + T + + H PV V + F S
Sbjct: 9 SNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVS 68
Query: 620 SGHDRTARLWATDHH 664
G D ++W +H
Sbjct: 69 GGDDYKIKVWNYKNH 83
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
D +R+ + R L GH+ V +F P + +++S S D TVR+W +
Sbjct: 114 DQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +2
Query: 449 VYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGH 628
++K +T S D+ R+W L+ +++++GH+ V V +SP+G++ AS G
Sbjct: 133 IWKTDGTLLQTFKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGE 192
Query: 629 DRTARLW 649
D R+W
Sbjct: 193 DNQCRIW 199
Score = 48.4 bits (110), Expect = 4e-06
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Frame = +2
Query: 407 DRDTCRNLF---GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPV 577
D T RN+ GH V V F P L S ED R+W L+ L + HV V
Sbjct: 158 DLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLV 217
Query: 578 WDVRWSPHGHYF-ASSGHDRTARLWA 652
V++ P YF A++ HD +W+
Sbjct: 218 SQVKYEPQERYFLATASHDMNVNIWS 243
Score = 38.7 bits (86), Expect = 0.003
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Frame = +2
Query: 356 DIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL-Q 532
D D+ A + + + KD + FG P+ + +L++CS +LW + Q
Sbjct: 36 DEDKNA-ETKLALKHCKDMVLGSSKFGDDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQ 94
Query: 533 CWTCLVVYRGHVWPVWDVRWSP-HGHYFASSGHDRTARLWATD 658
+VV +GH V DV +S A++ DRT ++W TD
Sbjct: 95 VTNKIVVLKGHKEHVTDVVFSSVDDECLATASTDRTEKIWKTD 137
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 48.4 bits (110), Expect = 4e-06
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Frame = +2
Query: 398 EEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW-------SLQC-WTCLVV 553
E+ + DT L GHS V V + P +L SCS D T+++W C T +
Sbjct: 125 EDDEFDTIAVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSEL 184
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
GH VW + ++ G + D ++W TD
Sbjct: 185 NNGHSSTVWSISFNAAGDKMVTCSDDLAVKIWKTD 219
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
Frame = +2
Query: 407 DRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQC-----WTCLVVYRGHVW 571
D ++ L GH V V+++ ++L +C D +V +W +Q + + V GH
Sbjct: 81 DSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSE 140
Query: 572 PVWDVRWSPHGHYFASSGHDRTARLWATD 658
V V W P S +D T ++W ++
Sbjct: 141 DVKMVLWHPTMDVLFSCSYDNTIKIWCSE 169
Score = 37.1 bits (82), Expect = 0.010
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 5/51 (9%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKT-MLLSCSEDTTVRLWS----LQCWTCLVVYR 559
+ L GH+ V+ VA++P ++ SCS D TVR+W + WTC + +R
Sbjct: 14 QKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWTCKLGHR 64
Score = 31.1 bits (67), Expect = 0.69
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 560 GHVWPVWDVRWSPHGH-YFASSGHDRTARLW 649
GH VW+V W+P AS D+T R+W
Sbjct: 18 GHTDRVWNVAWNPAADGVIASCSADKTVRIW 48
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 2/78 (2%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKT-MLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP 598
R+ H+ V V ++P + L+ S D TV+LW++ + ++ H + V+ W+P
Sbjct: 100 RSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNP 159
Query: 599 -HGHYFASSGHDRTARLW 649
HG FAS+ D T R+W
Sbjct: 160 KHGDVFASASGDCTLRIW 177
Score = 40.7 bits (91), Expect = 9e-04
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSE-DTTVRLWSLQCWTC- 544
+GD +R+ + ++ + + H + ++ + +L+ S D TV++W ++ +
Sbjct: 169 SGDCTLRIWDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVP 228
Query: 545 LVVYRGHVWPVWDVRWSPHGH-YFASSGHDRTARLW 649
L V GH + V V++SPH AS +D + LW
Sbjct: 229 LAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLW 264
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCWTCLV 550
L GH V KV F P + L+ SCS D +V LW LV
Sbjct: 232 LNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVEDALV 273
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
+ L GH VY D +++ S+D V++WS+ CL RGH + D+ S +
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 602 GHYFASSGHDRTARLW 649
+ AS+ +D R+W
Sbjct: 299 NIFIASASNDCVIRVW 314
Score = 44.4 bits (100), Expect = 7e-05
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 10/120 (8%)
Frame = +2
Query: 320 KLRGMKSAEKLQDIDREAGDVLV----RMMEEKDRDTCRNLF---GHSGPVYKVAFDPFK 478
+LRG ++A +DR V+ R+++ DT L GH G + +A
Sbjct: 240 RLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNN 299
Query: 479 TMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH---GHYFASSGHDRTARLW 649
+ S S D +R+W L + V RGH V + +SP + SS D T R+W
Sbjct: 300 IFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 46.8 bits (106), Expect = 1e-05
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
R L GH G V VAFDP + S D T+++W + + GH+ V + S
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNR 223
Query: 602 GHYFASSGHDRTARLW 649
Y S+G D+ + W
Sbjct: 224 HTYMFSAGDDKQVKCW 239
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/74 (28%), Positives = 32/74 (43%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L GH G V +A T + S +D V+ W L+ + Y GH+ V+ + P
Sbjct: 208 LTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLD 267
Query: 608 YFASSGHDRTARLW 649
+ G D R+W
Sbjct: 268 VVLTGGRDSVCRVW 281
Score = 36.3 bits (80), Expect = 0.018
Identities = 24/110 (21%), Positives = 46/110 (41%)
Frame = +2
Query: 320 KLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCS 499
++RG+ + + + D V+ + + R+ GH VY +A P ++L+
Sbjct: 214 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGG 273
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
D+ R+W ++ + V H V+ V P + HD T + W
Sbjct: 274 RDSVCRVWDIRTKMQIFVL-PHDSDVFSVLARPTDPQVITGSHDSTIKFW 322
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 536 WTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
W V +GH+ V V + P +F + DRT ++W
Sbjct: 160 WKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW 197
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H V+ V P +++ S D+T++ W L+ + H V + P + F
Sbjct: 294 HDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFV 353
Query: 617 SSGHD 631
S+ D
Sbjct: 354 SASAD 358
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKT-MLLSCSEDTTVRLWSL-QCWTCLVVYRGHVWPVWDVRWSPHGH 607
GH+ V + F P + +LLS D V++W + C+ Y GH V D+ +S G
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 608 YFASSGHDRTARLWATD 658
F ++G+D+ + W T+
Sbjct: 340 KFLTAGYDKNIKYWDTE 356
Score = 31.5 bits (68), Expect = 0.52
Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 17/162 (10%)
Frame = +2
Query: 221 GHTAISCDIC---DDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDI-----DREAG 376
GH DIC D S L G++ NIK W ++ S K+ + D +
Sbjct: 324 GHAKAVRDICFSNDGSKFLTAGYDK-NIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQ 382
Query: 377 DVLVRMMEEK-----DRDT---CRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ 532
++L+ M +K D +T + H G V + F ++ S+D ++R+W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 533 CWTCL-VVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
+ + H+ + + P+G++ A+ D +++T
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYST 484
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/76 (36%), Positives = 33/76 (43%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L GH PV+ + F P +L S S D TVRLW + V H V V + P G
Sbjct: 473 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 532
Query: 608 YFASSGHDRTARLWAT 655
ASS D W T
Sbjct: 533 QLASSTLDGQINFWDT 548
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH V V + P +L + ++D V++W++ TC + + H V + + H
Sbjct: 347 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 406
Query: 614 ASSGHDRTARLW 649
S+ D T R W
Sbjct: 407 LSASLDGTVRAW 418
Score = 32.3 bits (70), Expect = 0.30
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Frame = +2
Query: 203 YTLLNSGHTA-ISC-DICDDSTLLAVGFNNSNIKVWTLTP----IKLRGMKSAEKLQDID 364
Y L GH ++C DS LLA G +++ +KVW + I +A
Sbjct: 341 YILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFM 400
Query: 365 REAGDVLVRMMEEK----DRDTCRNLFGHSGPVYK----VAFDPFKTMLLSCSEDT-TVR 517
+ +L ++ D +N ++ P + + DP ++ + + D+ +
Sbjct: 401 ADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIF 460
Query: 518 LWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+WS + + GH PV + +SP ASS D T RLW
Sbjct: 461 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 504
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +2
Query: 482 MLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ C++ + +W + T ++ +GH + V V +SP A+ D ++W
Sbjct: 321 LTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 376
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/76 (36%), Positives = 33/76 (43%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L GH PV+ + F P +L S S D TVRLW + V H V V + P G
Sbjct: 513 LSGHEAPVHGLMFSPLTQLLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGK 572
Query: 608 YFASSGHDRTARLWAT 655
ASS D W T
Sbjct: 573 QLASSTLDGQINFWDT 588
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH V V + P +L + ++D V++W++ TC + + H V + + H
Sbjct: 387 GHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSL 446
Query: 614 ASSGHDRTARLW 649
S+ D T R W
Sbjct: 447 LSASLDGTVRAW 458
Score = 32.3 bits (70), Expect = 0.30
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 15/164 (9%)
Frame = +2
Query: 203 YTLLNSGHTA-ISC-DICDDSTLLAVGFNNSNIKVWTLTP----IKLRGMKSAEKLQDID 364
Y L GH ++C DS LLA G +++ +KVW + I +A
Sbjct: 381 YILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFM 440
Query: 365 REAGDVLVRMMEEK----DRDTCRNLFGHSGPVYK----VAFDPFKTMLLSCSEDT-TVR 517
+ +L ++ D +N ++ P + + DP ++ + + D+ +
Sbjct: 441 ADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVCAGTLDSFEIF 500
Query: 518 LWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+WS + + GH PV + +SP ASS D T RLW
Sbjct: 501 VWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/56 (21%), Positives = 26/56 (46%)
Frame = +2
Query: 482 MLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ C++ + +W + T ++ +GH + V V +SP A+ D ++W
Sbjct: 361 LTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVW 416
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 45.6 bits (103), Expect = 3e-05
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 2/146 (1%)
Frame = +2
Query: 233 ISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKS-AEKLQDIDREAGDVLVRMMEEKD 409
+S D +D ++ N + + +++P K RG S + K +D V + EK
Sbjct: 402 LSMDKQEDGSINLFLLANGSPEPVSMSP-KRRGRTSFSRKSVSLDNVLVPEAVFGLSEKP 460
Query: 410 RDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVR 589
C + GH V +++ + LLS S D TVRLW L TCL V+ H V ++
Sbjct: 461 --VC-SFVGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQ 515
Query: 590 WSP-HGHYFASSGHDRTARLWATDHH 664
++P +YF S D R+W+ H
Sbjct: 516 FNPVDDNYFISGSLDAKVRIWSIPDH 541
Score = 35.1 bits (77), Expect = 0.042
Identities = 33/141 (23%), Positives = 53/141 (37%), Gaps = 5/141 (3%)
Frame = +2
Query: 242 DICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTC 421
D+C DS L + S + T + RG L+ I A V E + D
Sbjct: 260 DVCKDSVDLDTNVSGSRV-----TKHRRRG----SWLKSIKNVASSV-TGYKERRSTDDR 309
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRG-----HVWPVWDV 586
+ G + A D + M E VR + C +++ H +W +
Sbjct: 310 DSPSERGGQRFSSATDDSRDMSFHDPERVKVRQYGKSCKELTALFKSQEIQAHKGSIWSI 369
Query: 587 RWSPHGHYFASSGHDRTARLW 649
++S G Y AS+G D ++W
Sbjct: 370 KFSLDGRYLASAGEDCVIQIW 390
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
R + GH G V VAFDP + S D T+++W + + GH+ V + S
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNR 229
Query: 602 GHYFASSGHDRTARLW 649
Y S+G D+ + W
Sbjct: 230 HTYMFSAGDDKQVKCW 245
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/110 (22%), Positives = 45/110 (40%)
Frame = +2
Query: 320 KLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCS 499
++RG+ + + + D V+ + + R+ GH VY +A P +LL+
Sbjct: 220 QVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGG 279
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
D+ R+W ++ + GH V V P + HD T + W
Sbjct: 280 RDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/74 (27%), Positives = 31/74 (41%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L GH V +A T + S +D V+ W L+ + Y GH+ V+ + P
Sbjct: 214 LTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLD 273
Query: 608 YFASSGHDRTARLW 649
+ G D R+W
Sbjct: 274 VLLTGGRDSVCRVW 287
Score = 34.7 bits (76), Expect = 0.056
Identities = 22/89 (24%), Positives = 38/89 (42%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D + R+ + + + L GH V V P +++ S DTT++ W L+ +
Sbjct: 281 DSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTL 340
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTAR 643
H V + P + FAS+ D T +
Sbjct: 341 THHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 536 WTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
W V +GH+ V V + P +F + DRT ++W
Sbjct: 166 WKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIW 203
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 407 DRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDV 586
D+ C +L GH + +++ + +LLS S D TVRLW ++ TCL ++ H V +
Sbjct: 496 DKPVC-SLKGHLDAILDLSWSKSQ-LLLSSSMDKTVRLWDIETKTCLKLF-AHNDYVTCI 552
Query: 587 RWSP-HGHYFASSGHDRTARLWA-TDHH 664
++SP +YF S D R+W+ D H
Sbjct: 553 QFSPVDENYFLSGSLDAKIRIWSIQDRH 580
Score = 34.3 bits (75), Expect = 0.074
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ H VW +++S HY AS G DR +W
Sbjct: 401 QAHEGAVWTIKFSQDAHYLASGGADRVIHVW 431
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/53 (22%), Positives = 23/53 (43%)
Frame = +2
Query: 419 CRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPV 577
C+ + H G V+ + F L S D + +W +Q + + G + P+
Sbjct: 397 CQEIQAHEGAVWTIKFSQDAHYLASGGADRVIHVWEVQECELMSMNEGSLTPI 449
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ-------CWTCLVVYRGHVWPVWDV 586
L HS V + F T+LLS S D ++S+Q + H +W
Sbjct: 643 LQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFSIQRTDNGEVSHKLMAKVEAHKRIIWAC 702
Query: 587 RWSPHGHYFASSGHDRTARLWATDH 661
W+P GH FA+S D+T ++W+ ++
Sbjct: 703 SWNPFGHQFATSSRDKTVKIWSVEN 727
Score = 31.1 bits (67), Expect = 0.69
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 536 WTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
W V GH V DV W+ G Y S D+T R+++
Sbjct: 405 WQMQKVPSGHFAAVTDVTWARTGEYLLSVSQDQTTRVFS 443
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/74 (32%), Positives = 32/74 (43%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L GH G V F+ L+C +D T+RLW+ + Y+ H V DV +
Sbjct: 14 LKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNA 73
Query: 608 YFASSGHDRTARLW 649
F S G DR W
Sbjct: 74 KFCSCGGDRQVYYW 87
Score = 35.1 bits (77), Expect = 0.042
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 491 SCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHH 664
SC D V W + + +RGH V V+++ S+G DR+ R+W H
Sbjct: 77 SCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSH 134
Score = 31.5 bits (68), Expect = 0.52
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ +GH V R++ G+Y + G DRT RLW
Sbjct: 13 ILKGHEGAVLAARFNGDGNYALTCGKDRTIRLW 45
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/93 (23%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKV--AFDPFKTMLLSCSEDTTVRLWSLQCWTCLV 550
D +R+++ + + GH +K ++ SED V W L L
Sbjct: 205 DSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFWDLVDAKVLS 264
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+R H V V + P +S D T R+W
Sbjct: 265 KFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +2
Query: 374 GDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
GD V + R GH G V V F+ ++++S D ++R+W
Sbjct: 80 GDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVW 129
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHY 610
GHSG + +++ LLS S D +VRLW + C CL ++ H V V+++P +
Sbjct: 354 GHSGDILDISWSK-NNRLLSASVDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPVDDDH 411
Query: 611 FASSGHDRTARLWA 652
F S D R+W+
Sbjct: 412 FISGSIDGKVRIWS 425
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
+ H + +++SP G Y AS+G D R+W+
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWS 279
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 413 DTCRNLFGHSGPVYKVAFDPF-KTMLLSCSEDTTVRLWSL-QC 535
+ C +F H+ V V F+P +S S D VR+WS QC
Sbjct: 387 EDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQC 429
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
H G + + F P L S ED +R+WS+
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 44.8 bits (101), Expect = 5e-05
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHY 610
GHSG + +++ LLS S D +VRLW + C CL ++ H V V+++P +
Sbjct: 354 GHSGDILDISWSK-NNRLLSASVDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPVDDDH 411
Query: 611 FASSGHDRTARLWA 652
F S D R+W+
Sbjct: 412 FISGSIDGKVRIWS 425
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
+ H + +++SP G Y AS+G D R+W+
Sbjct: 248 QAHEGAILAMKFSPDGRYLASAGEDGVLRVWS 279
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +2
Query: 413 DTCRNLFGHSGPVYKVAFDPF-KTMLLSCSEDTTVRLWSL-QC 535
+ C +F H+ V V F+P +S S D VR+WS QC
Sbjct: 387 EDCLGIFSHNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQC 429
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
H G + + F P L S ED +R+WS+
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY-RGHVWPVWDVRWSPHG 604
L GH PV + + P +L+C + +R W + C+ +Y +G + P+ W P G
Sbjct: 315 LVGHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPI-SCGWYPDG 373
Query: 605 HYFASSGHDRTARLWATD 658
+ DR+ +W D
Sbjct: 374 QGIIAGMTDRSICMWDLD 391
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 449 VYKVAFDPFK-TMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG-HYFASS 622
+ + F +K + S SED+ V +W +V GH V V WSP H AS+
Sbjct: 491 IIRSCFGGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASA 550
Query: 623 GHDRTARLWATD 658
D T R+W D
Sbjct: 551 SDDGTIRIWGLD 562
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ H VW +++S +G Y ASS D+TA +W
Sbjct: 269 ILESHTDEVWFLQFSHNGKYLASSSKDQTAIIW 301
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 44.4 bits (100), Expect = 7e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +2
Query: 377 DVLVRMMEEKDRD-TCRNLFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCWTCLV 550
D VR+ + ++ + R GHS V + F P K L+ SC D +R WS+ +C
Sbjct: 714 DKTVRVWDADNKGYSLRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTR 773
Query: 551 VYRGHVWPVWDVRWSPH-GHYFASS 622
VY+G +R+ P G Y A+S
Sbjct: 774 VYKG---GSTQIRFQPRVGKYLAAS 795
Score = 36.3 bits (80), Expect = 0.018
Identities = 27/107 (25%), Positives = 39/107 (36%), Gaps = 3/107 (2%)
Frame = +2
Query: 350 LQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKT---MLLSCSEDTTVRL 520
L D + D + R M+ T + KV F + ML S D L
Sbjct: 618 LSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAVL 677
Query: 521 WSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDH 661
W H + D+R+SP A+S D+T R+W D+
Sbjct: 678 WYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADN 724
Score = 34.7 bits (76), Expect = 0.056
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +2
Query: 383 LVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
LV +++ + + +L GH+ P+ V +DP L S SED V++W+L
Sbjct: 799 LVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSED-MVKVWTL 846
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/71 (23%), Positives = 29/71 (40%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
+ G ++ F P L+ S V + ++ +GH P+ V W P G + A
Sbjct: 775 YKGGSTQIRFQPRVGKYLAASSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLA 834
Query: 617 SSGHDRTARLW 649
S D ++W
Sbjct: 835 SVSED-MVKVW 844
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHY 610
GH+G V +++ LLS S D TVRLW + CL V+ H V V+++P + +Y
Sbjct: 326 GHTGEVLDISWSK-DNYLLSASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENY 383
Query: 611 FASSGHDRTARLW 649
F S D R+W
Sbjct: 384 FMSGSIDGKVRIW 396
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 545 LVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
L +RGH V D+ WS +Y S+ D+T RLW
Sbjct: 321 LYEFRGHTGEVLDISWS-KDNYLLSASMDKTVRLW 354
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLS-CSEDTTVRLWSLQCWTC-LVVYRGHVWPVWDVRWSP-HGH 607
H + ++F+PF +L+ S D+TV L+ L+ T L V H V+ V W P H
Sbjct: 260 HEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHET 319
Query: 608 YFASSGHDRTARLW 649
ASSG DR +W
Sbjct: 320 VLASSGEDRRLMVW 333
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 437 HSGPVYKVAFDP-FKTMLLSCSEDTTVRLWSL 529
H G V++V +DP +T+L S ED + +W +
Sbjct: 304 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDI 335
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL--QCWTCLVVYR 559
+R+ + +T R GH+ V VAF ++S S D T++LW+ +C +
Sbjct: 87 LRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGD 146
Query: 560 GHVWPVWDVRWSPHG--HYFASSGHDRTARLW 649
GH V VR+SP+ S+ D+T ++W
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/78 (34%), Positives = 32/78 (41%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
R L GHS V V LS S D +RLW L + GH V V +S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTD 116
Query: 602 GHYFASSGHDRTARLWAT 655
S+ DRT +LW T
Sbjct: 117 NRQIVSASRDRTIKLWNT 134
Score = 35.5 bits (78), Expect = 0.032
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTM--LLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
GH V V F P + ++S S D TV++W+LQ GH + V SP G
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGS 206
Query: 608 YFASSGHDRTARLW 649
AS G D LW
Sbjct: 207 LCASGGKDGVILLW 220
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
+L GHSG + VA P ++ S +D + LW L
Sbjct: 188 SLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = +2
Query: 383 LVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRG 562
++R+ + + L GH+ V + D LS S D+ +RLW L CL Y
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 563 HVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
H VW + +P + S G D+ L+ TD
Sbjct: 296 HTDSVWALACNPSFSHVYSGGRDQC--LYLTD 325
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH VY +A + TML+S + +R+W + + + RGH V + G +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 614 ASSGHDRTARLW 649
S D RLW
Sbjct: 271 LSGSSDSMIRLW 282
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLW-SLQCWTCLVVYRGH 565
++ L+SCS DTTV+ W L C R H
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQH 125
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/92 (29%), Positives = 41/92 (44%)
Frame = +2
Query: 383 LVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRG 562
++R+ + + L GH+ V + D LS S D+ +RLW L CL Y
Sbjct: 236 VLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYAV 295
Query: 563 HVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
H VW + +P + S G D+ L+ TD
Sbjct: 296 HTDSVWALACNPSFSHVYSGGRDQC--LYLTD 325
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH VY +A + TML+S + +R+W + + + RGH V + G +
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 614 ASSGHDRTARLW 649
S D RLW
Sbjct: 271 LSGSSDSMIRLW 282
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLW-SLQCWTCLVVYRGH 565
++ L+SCS DTTV+ W L C R H
Sbjct: 95 ESTLVSCSSDTTVKTWDGLSDGVCTRTLRQH 125
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 428 LFGHSGPVYKVAF--DPFKTMLLSCSEDTTVRLW---SLQCWTCLVVYRGHVWPVWDVRW 592
L GH GPV++VA+ F ++L SCS D + LW + WT V+ H V + W
Sbjct: 52 LTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEGNQNQWTQAHVFTDHKVSVNSIAW 111
Query: 593 SPH 601
+PH
Sbjct: 112 APH 114
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCW---TCLVVYRGHVWPVWDVRWS--P 598
GHS ++ V D + + + S D T+++ + L GH PVW V W+
Sbjct: 9 GHSDTIHDVVMDYYGKRVATASSDCTIKITGVSNSGGSQHLATLTGHRGPVWQVAWAHPK 68
Query: 599 HGHYFASSGHDRTARLW 649
G AS +D LW
Sbjct: 69 FGSLLASCSYDGQIILW 85
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSL----QCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTAR 643
K+ + S SED V +W++ + W V+ + PVW V WS G+ A S +
Sbjct: 226 KSTIASGSEDGKVIIWTIGKEGEQWEGTVL-KDFKTPVWRVSWSLTGNLLAVSDGNNNVT 284
Query: 644 LW 649
+W
Sbjct: 285 VW 286
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHY 610
GH V +A+ + LLS S D TVRLW+L TCL V+ H V ++++P Y
Sbjct: 511 GHVDDVLDLAWSKSQH-LLSSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRY 568
Query: 611 FASSGHDRTARLWA 652
F S D R+W+
Sbjct: 569 FISGSLDAKVRVWS 582
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
++GHV V D+ WS H +SS D+T RLW
Sbjct: 509 FQGHVDDVLDLAWSKSQHLLSSS-MDKTVRLW 539
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 347 KLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF-KTMLLSCSEDTTVRLW 523
K Q + + D VR+ + TC +F HS V + F+P +S S D VR+W
Sbjct: 523 KSQHLLSSSMDKTVRLWNLSSQ-TCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVW 581
Query: 524 SL 529
S+
Sbjct: 582 SI 583
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ H +W +++S G Y AS+G D +W
Sbjct: 410 QAHNGSIWSIKFSLDGKYLASAGEDCIIHIW 440
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH P+ + ++ +L SC++D T LW L YRGH VW S
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 614 ASSGHDRTARLW 649
+ D+TA+LW
Sbjct: 68 ITGSADQTAKLW 79
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH P+ + ++ +L SC++D T LW L YRGH VW S
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 614 ASSGHDRTARLW 649
+ D+TA+LW
Sbjct: 68 ITGSADQTAKLW 79
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 308 LTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTML 487
L + L G + A + D AG + ++ ++ + GH GP+ +AF+P
Sbjct: 246 LNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSF 305
Query: 488 LSCSEDTTVRL 520
S ED VRL
Sbjct: 306 SSGGEDGYVRL 316
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHY 610
GH + + + L+ S D T +LW ++ T L Y V PV V SP H
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYT-TVVPVNAVSLSPLLNHV 249
Query: 611 FASSGHDRTARLWATDH 661
G D +A + TDH
Sbjct: 250 VLGGGQDASA-VTTTDH 265
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/72 (31%), Positives = 33/72 (45%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH P+ + ++ +L SC++D T LW L YRGH VW S
Sbjct: 8 GHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRL 67
Query: 614 ASSGHDRTARLW 649
+ D+TA+LW
Sbjct: 68 ITGSADQTAKLW 79
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +2
Query: 308 LTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTML 487
L + L G + A + D AG + ++ ++ + GH GP+ +AF+P
Sbjct: 246 LNHVVLGGGQDASAVTTTDHRAGKFEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSF 305
Query: 488 LSCSEDTTVRL 520
S ED VRL
Sbjct: 306 SSGGEDGYVRL 316
Score = 29.5 bits (63), Expect = 2.1
Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHY 610
GH + + + L+ S D T +LW ++ T L Y V PV V SP H
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRTLTLLKTYT-TVVPVNAVSLSPLLNHV 249
Query: 611 FASSGHDRTARLWATDH 661
G D +A + TDH
Sbjct: 250 VLGGGQDASA-VTTTDH 265
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Frame = +2
Query: 158 KRVQLGPDSLPSICFYTLLNSGHTA--ISCDICDDST-LLAVGFNNSNIKVWTLTPIKLR 328
K +++ S P T+ SGH A +S D T LL +N++I+ W + +R
Sbjct: 572 KTIKIWDASDPGYFLRTI--SGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 629
Query: 329 GMKSAEKLQDIDREAGDVL-------VRMMEEKDRDTCRNLF-GHSGPVYKVAFDPFKTM 484
+K A G L V + + ++ + N+F GHS V+ V + P +
Sbjct: 630 AVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 689
Query: 485 LLSCSEDTTVRLWSLQCWTCL 547
+ S SED V+LWSL C+
Sbjct: 690 VASVSED-AVKLWSLSSGDCI 709
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Frame = +2
Query: 218 SGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGM--KSAEKLQDID--------- 364
S I C D LLA ++ + +W + +++ + A + D+
Sbjct: 507 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA 566
Query: 365 REAGDVLVRMMEEKDRDT-CRNLFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCW 538
+ D +++ + D R + GH+ PV + F P KT LL SC + +R W +
Sbjct: 567 TSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA- 625
Query: 539 TCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHH 664
+C+ +G VR+ P F ++ + T ++ +++
Sbjct: 626 SCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENN 664
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 443 GPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV-VYRGHVWPVWDVRWSPHGHYFAS 619
G +V F P L+ + + TV ++ ++ V +++GH V V WSP+G AS
Sbjct: 633 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 692
Query: 620 SGHDRTARLWA 652
D +LW+
Sbjct: 693 VSED-AVKLWS 702
Score = 34.3 bits (75), Expect = 0.074
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
V++ D L + V F P LL + LW+ C+ V GH
Sbjct: 698 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AGH 756
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ + SP AS+ HD++ ++W
Sbjct: 757 ECVISALAQSPSTGVVASASHDKSVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Frame = +2
Query: 158 KRVQLGPDSLPSICFYTLLNSGHTA--ISCDICDDST-LLAVGFNNSNIKVWTLTPIKLR 328
K +++ S P T+ SGH A +S D T LL +N++I+ W + +R
Sbjct: 574 KTIKIWDASDPGYFLRTI--SGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 631
Query: 329 GMKSAEKLQDIDREAGDVL-------VRMMEEKDRDTCRNLF-GHSGPVYKVAFDPFKTM 484
+K A G L V + + ++ + N+F GHS V+ V + P +
Sbjct: 632 AVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 485 LLSCSEDTTVRLWSLQCWTCL 547
+ S SED V+LWSL C+
Sbjct: 692 VASVSED-AVKLWSLSSGDCI 711
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Frame = +2
Query: 218 SGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGM--KSAEKLQDID--------- 364
S I C D LLA ++ + +W + +++ + A + D+
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA 568
Query: 365 REAGDVLVRMMEEKDRDT-CRNLFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCW 538
+ D +++ + D R + GH+ PV + F P KT LL SC + +R W +
Sbjct: 569 TSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA- 627
Query: 539 TCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHH 664
+C+ +G VR+ P F ++ + T ++ +++
Sbjct: 628 SCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 443 GPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV-VYRGHVWPVWDVRWSPHGHYFAS 619
G +V F P L+ + + TV ++ ++ V +++GH V V WSP+G AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 620 SGHDRTARLWA 652
D +LW+
Sbjct: 695 VSED-AVKLWS 704
Score = 34.3 bits (75), Expect = 0.074
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
V++ D L + V F P LL + LW+ C+ V GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AGH 758
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ + SP AS+ HD++ ++W
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Frame = +2
Query: 158 KRVQLGPDSLPSICFYTLLNSGHTA--ISCDICDDST-LLAVGFNNSNIKVWTLTPIKLR 328
K +++ S P T+ SGH A +S D T LL +N++I+ W + +R
Sbjct: 574 KTIKIWDASDPGYFLRTI--SGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 631
Query: 329 GMKSAEKLQDIDREAGDVL-------VRMMEEKDRDTCRNLF-GHSGPVYKVAFDPFKTM 484
+K A G L V + + ++ + N+F GHS V+ V + P +
Sbjct: 632 AVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 485 LLSCSEDTTVRLWSLQCWTCL 547
+ S SED V+LWSL C+
Sbjct: 692 VASVSED-AVKLWSLSSGDCI 711
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Frame = +2
Query: 218 SGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGM--KSAEKLQDID--------- 364
S I C D LLA ++ + +W + +++ + A + D+
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA 568
Query: 365 REAGDVLVRMMEEKDRDT-CRNLFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCW 538
+ D +++ + D R + GH+ PV + F P KT LL SC + +R W +
Sbjct: 569 TSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA- 627
Query: 539 TCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHH 664
+C+ +G VR+ P F ++ + T ++ +++
Sbjct: 628 SCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 443 GPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV-VYRGHVWPVWDVRWSPHGHYFAS 619
G +V F P L+ + + TV ++ ++ V +++GH V V WSP+G AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 620 SGHDRTARLWA 652
D +LW+
Sbjct: 695 VSED-AVKLWS 704
Score = 34.3 bits (75), Expect = 0.074
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
V++ D L + V F P LL + LW+ C+ V GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AGH 758
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ + SP AS+ HD++ ++W
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Frame = +2
Query: 158 KRVQLGPDSLPSICFYTLLNSGHTA--ISCDICDDST-LLAVGFNNSNIKVWTLTPIKLR 328
K +++ S P T+ SGH A +S D T LL +N++I+ W + +R
Sbjct: 574 KTIKIWDASDPGYFLRTI--SGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 631
Query: 329 GMKSAEKLQDIDREAGDVL-------VRMMEEKDRDTCRNLF-GHSGPVYKVAFDPFKTM 484
+K A G L V + + ++ + N+F GHS V+ V + P +
Sbjct: 632 AVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 485 LLSCSEDTTVRLWSLQCWTCL 547
+ S SED V+LWSL C+
Sbjct: 692 VASVSED-AVKLWSLSSGDCI 711
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Frame = +2
Query: 218 SGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGM--KSAEKLQDID--------- 364
S I C D LLA ++ + +W + +++ + A + D+
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA 568
Query: 365 REAGDVLVRMMEEKDRDT-CRNLFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCW 538
+ D +++ + D R + GH+ PV + F P KT LL SC + +R W +
Sbjct: 569 TSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA- 627
Query: 539 TCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHH 664
+C+ +G VR+ P F ++ + T ++ +++
Sbjct: 628 SCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 443 GPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV-VYRGHVWPVWDVRWSPHGHYFAS 619
G +V F P L+ + + TV ++ ++ V +++GH V V WSP+G AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 620 SGHDRTARLWA 652
D +LW+
Sbjct: 695 VSED-AVKLWS 704
Score = 34.3 bits (75), Expect = 0.074
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
V++ D L + V F P LL + LW+ C+ V GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AGH 758
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ + SP AS+ HD++ ++W
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 43.2 bits (97), Expect = 2e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Frame = +2
Query: 158 KRVQLGPDSLPSICFYTLLNSGHTA--ISCDICDDST-LLAVGFNNSNIKVWTLTPIKLR 328
K +++ S P T+ SGH A +S D T LL +N++I+ W + +R
Sbjct: 574 KTIKIWDASDPGYFLRTI--SGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 631
Query: 329 GMKSAEKLQDIDREAGDVL-------VRMMEEKDRDTCRNLF-GHSGPVYKVAFDPFKTM 484
+K A G L V + + ++ + N+F GHS V+ V + P +
Sbjct: 632 AVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL 691
Query: 485 LLSCSEDTTVRLWSLQCWTCL 547
+ S SED V+LWSL C+
Sbjct: 692 VASVSED-AVKLWSLSSGDCI 711
Score = 42.7 bits (96), Expect = 2e-04
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 13/162 (8%)
Frame = +2
Query: 218 SGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGM--KSAEKLQDID--------- 364
S I C D LLA ++ + +W + +++ + A + D+
Sbjct: 509 SASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA 568
Query: 365 REAGDVLVRMMEEKDRDT-CRNLFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCW 538
+ D +++ + D R + GH+ PV + F P KT LL SC + +R W +
Sbjct: 569 TSSFDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINA- 627
Query: 539 TCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHH 664
+C+ +G VR+ P F ++ + T ++ +++
Sbjct: 628 SCVRAVKG---ASTQVRFQPRTGQFLAAASENTVSIFDIENN 666
Score = 36.3 bits (80), Expect = 0.018
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 443 GPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV-VYRGHVWPVWDVRWSPHGHYFAS 619
G +V F P L+ + + TV ++ ++ V +++GH V V WSP+G AS
Sbjct: 635 GASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVAS 694
Query: 620 SGHDRTARLWA 652
D +LW+
Sbjct: 695 VSED-AVKLWS 704
Score = 34.3 bits (75), Expect = 0.074
Identities = 21/88 (23%), Positives = 34/88 (38%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
V++ D L + V F P LL + LW+ C+ V GH
Sbjct: 700 VKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAIELWNTMENKCMTV-AGH 758
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ + SP AS+ HD++ ++W
Sbjct: 759 ECVISALAQSPSTGVVASASHDKSVKIW 786
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKT-MLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
L GH+ PV + F P +L S S+D V + + T L GH V V SP G
Sbjct: 196 LEGHNMPVRSLVFSPVDPRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDG 255
Query: 605 HYFASSGHDRTARLW 649
A+ DRT RLW
Sbjct: 256 GAIATGSSDRTVRLW 270
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D V++ + D R GHS V +A P + S S D+ VR++ + + V
Sbjct: 39 DETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAVL 98
Query: 557 RGHVWPVWDVRWSPHGHYFA-SSGHDRTARLWAT 655
VW +++ P G A + G + +LW T
Sbjct: 99 EAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDT 132
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/73 (28%), Positives = 32/73 (43%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
V M + + + ++ GH+ V V P + + S D TVRLW L+ + H
Sbjct: 225 VNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNH 284
Query: 566 VWPVWDVRWSPHG 604
VW V + P G
Sbjct: 285 NDQVWSVAFRPPG 297
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLS-CSEDTTVRLWSLQCWTC-LVVYRGHVWPVWDVRWSP-HGH 607
H V ++F+PF +L+ S D+TV L+ L+ L V H V+ V W P H
Sbjct: 259 HEREVNYLSFNPFNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHET 318
Query: 608 YFASSGHDRTARLW 649
ASSG DR +W
Sbjct: 319 VLASSGEDRRLMVW 332
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 437 HSGPVYKVAFDP-FKTMLLSCSEDTTVRLWSL 529
H G V++V +DP +T+L S ED + +W L
Sbjct: 303 HEGEVFQVEWDPNHETVLASSGEDRRLMVWDL 334
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
GH P+ + ++ +L SC++D T +W L YRGH VW S
Sbjct: 35 GHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRL 94
Query: 614 ASSGHDRTARLW 649
+ D+TA+LW
Sbjct: 95 ITGSADQTAKLW 106
Score = 33.5 bits (73), Expect = 0.13
Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 26/163 (15%)
Frame = +2
Query: 239 CDICDDSTLLAVGFNNSNIKVWTLTPIK-LRGMKSAEKLQDIDREAGDVLV--------- 388
CDI DS+ L G + K+W + K L K + +D GD L
Sbjct: 85 CDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHLAVITTDHFVG 144
Query: 389 --------RMMEEKDRDTCRNLFGHSGP-----VYKVAFDPFKTMLLSCSEDTTVRLWSL 529
R+ E+ + ++ P + + + P ++S ED +R+W
Sbjct: 145 TSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGGEDAAIRIWDA 204
Query: 530 QCWTCLVVYR---GHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ L GH + + + +F + HD+TA+LW
Sbjct: 205 ETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLW 247
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +2
Query: 308 LTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTML 487
L + L G + A + D AG + + ++ + GH GP+ +AF P
Sbjct: 273 LNHVVLGGGQDASAVTTTDHRAGKFEAKFYDTILQEEIGGVKGHFGPINALAFSPDGKSF 332
Query: 488 LSCSEDTTVRL 520
S ED VRL
Sbjct: 333 SSGGEDGYVRL 343
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHY 610
GH + + + L+ S D T +LW ++ T + Y V PV V SP H
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYT-TVVPVNAVAMSPLLNHV 276
Query: 611 FASSGHDRTARLWATDH 661
G D +A + TDH
Sbjct: 277 VLGGGQDASA-VTTTDH 292
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARL 646
+GH P+ + +SP G F+S G D RL
Sbjct: 314 KGHFGPINALAFSPDGKSFSSGGEDGYVRL 343
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL--QCWTCLVVYR 559
+R+ + ++ R GH+ V VAF ++S S D T++LW+ +C +
Sbjct: 87 LRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEAD 146
Query: 560 GHVWPVWDVRWSPHG--HYFASSGHDRTARLW 649
GH V VR+SP+ S+ D+T ++W
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/78 (33%), Positives = 32/78 (41%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
R + GHS V V LS S D +RLW L + GH V V +S
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTD 116
Query: 602 GHYFASSGHDRTARLWAT 655
S+ DRT +LW T
Sbjct: 117 NRQIVSASRDRTIKLWNT 134
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTM--LLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
GH V V F P + ++S S D TV++W+LQ GH + V SP G
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGS 206
Query: 608 YFASSGHDRTARLW 649
AS G D LW
Sbjct: 207 LCASGGKDGVILLW 220
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
L H+ Y +A DP S D+ V LW + CL + WPV + ++ G
Sbjct: 187 LTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGE 246
Query: 608 YFASSGHD 631
Y AS+ D
Sbjct: 247 YIASASED 254
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ----CWTCLVVYRGHVWPVWDVR 589
R GH V+ VA++ T L S S D T R+W+++ + +GH V +
Sbjct: 14 REYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLC 73
Query: 590 WSP-HGHYFASSGHDRTARLW 649
W P H A++ D++ RLW
Sbjct: 74 WDPKHSDLVATASGDKSVRLW 94
Score = 36.3 bits (80), Expect = 0.018
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +2
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDHH 664
E+TT+ SL Y+GH V V W+ +G AS D+TAR+W + H
Sbjct: 2 EETTIPFKSLHSRE----YQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPH 52
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCL-VVYRGHVWPVWDVRWSPHG 604
L GH G ++++ + + ++S S+D + R+W + + V GH VWD S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--D 288
Query: 605 HYFASSGHDRTARLWATD 658
++G D T R+W D
Sbjct: 289 SLIVTAGEDCTCRVWGVD 306
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCL-VVYRGHVWPVWDVRWSPHG 604
L GH G ++++ + + ++S S+D + R+W + + V GH VWD S
Sbjct: 231 LTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVGPVLFGHSVRVWDCCIS--D 288
Query: 605 HYFASSGHDRTARLWATD 658
++G D T R+W D
Sbjct: 289 SLIVTAGEDCTCRVWGVD 306
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 41.9 bits (94), Expect = 4e-04
Identities = 27/78 (34%), Positives = 32/78 (41%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
R L GHS V V LS S D +RLW L + GH V V +S
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLD 116
Query: 602 GHYFASSGHDRTARLWAT 655
S+ DRT +LW T
Sbjct: 117 NRQIVSASRDRTIKLWNT 134
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +2
Query: 434 GHSGPVYKVAFDP--FKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
GH V V F P + ++S S D TV++W+L GH V V SP G
Sbjct: 148 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS 207
Query: 608 YFASSGHDRTARLW 649
AS G D LW
Sbjct: 208 LCASGGKDGVVLLW 221
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
L GH+G V VA P ++ S +D V LW L
Sbjct: 190 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDL 223
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.5 bits (93), Expect = 5e-04
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Frame = +2
Query: 308 LTPIKLRGMKSAEKLQDIDREAGD----VLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF 475
+ P+K+ K+ EK R++ D VL + GH G + +++
Sbjct: 275 IEPLKINNEKT-EKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSE- 332
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHYFASSGHDRTARLW 649
K LLS S D TVRLW + C CL + H V V ++P +YF S D R+W
Sbjct: 333 KGYLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
+ H + +++SP G Y AS+G D R+W+
Sbjct: 214 FSAHDGSILAMKFSPDGKYIASAGEDCVVRVWS 246
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
H G + + F P + S ED VR+WS+
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.5 bits (93), Expect = 5e-04
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Frame = +2
Query: 308 LTPIKLRGMKSAEKLQDIDREAGD----VLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF 475
+ P+K+ K+ EK R++ D VL + GH G + +++
Sbjct: 275 IEPLKINNEKT-EKKSSFLRKSSDSTCVVLPPTIFSISEKPLHEFKGHIGEILDLSWSE- 332
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHYFASSGHDRTARLW 649
K LLS S D TVRLW + C CL + H V V ++P +YF S D R+W
Sbjct: 333 KGYLLSSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIW 390
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
+ H + +++SP G Y AS+G D R+W+
Sbjct: 214 FSAHDGSILAMKFSPDGKYIASAGEDCVVRVWS 246
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
H G + + F P + S ED VR+WS+
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 41.1 bits (92), Expect = 6e-04
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 401 EKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVW 580
+K++ R L+GH GP+ +A D T + S S D +VR+W C+ R W VW
Sbjct: 245 QKEKTEFR-LWGHEGPITSLALD--MTSIFSGSWDMSVRIWDRSSMKCVKTLRHSDW-VW 300
Query: 581 DVRWSPHGHYFAS-SGHD 631
+ +PH AS SG D
Sbjct: 301 GL--APHETTLASTSGSD 316
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 41.1 bits (92), Expect = 6e-04
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +2
Query: 428 LFGHSGPVYKVAF--DPFKTMLLSCSEDTTVRLW---SLQCWTCLVVYRGHVWPVWDVRW 592
L GH GPV++VA+ + ++L SCS D V LW + WT V+ H V + W
Sbjct: 52 LTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEGNQNQWTQDHVFTDHKSSVNSIAW 111
Query: 593 SPH 601
+PH
Sbjct: 112 APH 114
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQC---WTCLVVYRGHVWPVWDVRWS--P 598
GH V+ V D + + + S D T+++ + L GH PVW+V W+
Sbjct: 9 GHEDIVHDVQMDYYGKRIATASSDCTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPK 68
Query: 599 HGHYFASSGHDRTARLW 649
+G AS +D LW
Sbjct: 69 YGSILASCSYDGQVILW 85
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSL----QCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTAR 643
K+ + S S+D V +W++ + W V+ + + PVW V WS G+ A S +
Sbjct: 226 KSTIASGSQDGKVIIWTVGKEGEQWEGKVL-KDFMTPVWRVSWSLTGNLLAVSDGNNNVT 284
Query: 644 LW 649
+W
Sbjct: 285 VW 286
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H PV + F ML S S+D +++W ++ C+ + H V + +S G
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLL 321
Query: 617 SSGHDRTARL 646
S+ D+TAR+
Sbjct: 322 STSFDQTARI 331
Score = 35.5 bits (78), Expect = 0.032
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
R HS V ++F + LLS S D T R+ L+ L +RGH V ++
Sbjct: 299 RRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSD 358
Query: 602 GHYFASSGHDRTARLW 649
G ++ D T ++W
Sbjct: 359 GSRIITASSDCTVKVW 374
Score = 34.3 bits (75), Expect = 0.074
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Frame = +2
Query: 242 DICDDSTLLAVGFNNSNIKVWTL-TPIKLR-------GMKSAEKLQDIDR---EAGDVLV 388
D DS +LA G + IK+W + T + +R G+ S +D + + D
Sbjct: 270 DFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTA 329
Query: 389 RMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYR 559
R+ K + GH+ V F + +++ S D TV++W + CL ++
Sbjct: 330 RIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFK 386
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 39.9 bits (89), Expect = 0.001
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 407 DRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDV 586
D+ C + GH V +++ + +LLS S D TVRLW ++ +CL ++ H V V
Sbjct: 509 DKPIC-SFTGHLDDVLDLSWSRSQ-LLLSSSMDKTVRLWDIETQSCLKLF-AHNDYVTCV 565
Query: 587 RWSP-HGHYFASSGHDRTARLW 649
+++P YF S D R+W
Sbjct: 566 QFNPLDEDYFISGSLDAKIRIW 587
Score = 35.5 bits (78), Expect = 0.032
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +2
Query: 419 CRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPV 577
C+ + H G ++ + F P +L S ED + +W +Q + + G + P+
Sbjct: 404 CQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQECEIMSMNEGSLTPI 456
Score = 30.7 bits (66), Expect = 0.91
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ H +W +++SP H AS+G D +W
Sbjct: 408 QAHQGGIWTMKFSPDSHLLASAGEDCAIHVW 438
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/94 (24%), Positives = 39/94 (41%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY 556
D + + + + L GH+ + + + L++ S+D T R+WS+ +C V
Sbjct: 1001 DTVANIWDIRSGKQMHKLKGHTKWIRSIRM--VEDTLITGSDDWTARVWSVSRGSCDAVL 1058
Query: 557 RGHVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
H PV V +SP + D R W D
Sbjct: 1059 ACHAGPVQSVEYSPFDKGIITGSADGLLRFWEND 1092
Score = 30.3 bits (65), Expect = 1.2
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 11/155 (7%)
Frame = +2
Query: 221 GHTAISCDICDDSTLLAVGFNNSNIKVW----TLTPIKLRG---MKSAEKLQDIDR---E 370
GHT I D + G ++ ++ VW T +L+G S K+ +R
Sbjct: 897 GHTGTVRAISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKMLSGERVLTA 956
Query: 371 AGDVLVRMMEEKDRDTCRNLFGH-SGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCL 547
A D V+M + + D C G S + + +D +L + DT +W ++ +
Sbjct: 957 AHDGTVKMWDVRT-DMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANIWDIRSGKQM 1015
Query: 548 VVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWA 652
+GH + +R + D TAR+W+
Sbjct: 1016 HKLKGHTKWIRSIRMVE--DTLITGSDDWTARVWS 1048
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +2
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
ED VRL+ + +GH PV VR++P G +AS D T R+W T
Sbjct: 248 EDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 35.1 bits (77), Expect = 0.042
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 395 MEEKDRDTCRNLFGHSGPVYKVAFDPFKT---MLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
ME+K T GHS PV + + P L+S S+D+ L + + + + GH
Sbjct: 1 MEKKKVATPLVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGH 60
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
VW + AS+ D +A+LW
Sbjct: 61 KGAVWSSCLDNNALRAASASADFSAKLW 88
Score = 34.3 bits (75), Expect = 0.074
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
GH GPV+ V F P S SED T+R+W
Sbjct: 268 GHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
++L H V + + P L+S S D + +W + + + H V V W P
Sbjct: 47 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 106
Query: 602 GHYFASSGHDRTARLWA 652
Y AS DRT R++A
Sbjct: 107 AKYVASLSSDRTCRIYA 123
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 509 TVRLWSLQCWTCLVVYRG-HVWPVWDVRWSPHGHYFASSGHD 631
+V ++ +C + V G H + D+ WSP+ Y A S D
Sbjct: 262 SVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQD 303
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
++L H V + + P L+S S D + +W + + + H V V W P
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 602 GHYFASSGHDRTARLWA 652
Y AS DRT R++A
Sbjct: 166 AKYVASLSSDRTCRIYA 182
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL------QCWTCLVVYRGHVWPVWDVRWSP 598
H V + F P +L S ++ + +W L Q W H V D++WSP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 599 HGHYFASSGHDRTARLW 649
Y S D + +W
Sbjct: 123 DDAYLISGSVDNSCIIW 139
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 509 TVRLWSLQCWTCLVVYRG-HVWPVWDVRWSPHGHYFASSGHD 631
+V ++ +C + V G H + D+ WSP+ Y A S D
Sbjct: 321 SVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQD 362
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
++L H V + + P L+S S D + +W + + + H V V W P
Sbjct: 106 KSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPL 165
Query: 602 GHYFASSGHDRTARLWA 652
Y AS DRT R++A
Sbjct: 166 AKYVASLSSDRTCRIYA 182
Score = 31.5 bits (68), Expect = 0.52
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 6/77 (7%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL------QCWTCLVVYRGHVWPVWDVRWSP 598
H V + F P +L S ++ + +W L Q W H V D++WSP
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSP 122
Query: 599 HGHYFASSGHDRTARLW 649
Y S D + +W
Sbjct: 123 DDAYLISGSVDNSCIIW 139
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +2
Query: 509 TVRLWSLQCWTCLVVYRG-HVWPVWDVRWSPHGHYFASSGHD 631
+V ++ +C + V G H + D+ WSP+ Y A S D
Sbjct: 321 SVYIYDTECVAPIAVLAGLHYAAITDITWSPNASYLALSSQD 362
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGH-DRT 637
AF L S D TV++ + CL V GH W VR+ PH +SG D
Sbjct: 113 AFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLE 172
Query: 638 ARLWAT 655
RLW T
Sbjct: 173 VRLWNT 178
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 479 TMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHYFASSGHDRTARLW 649
+ + S SED+ V +W+L+ L V GH V V W+P + AS+ D+T R+W
Sbjct: 456 SFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 4/111 (3%)
Frame = +2
Query: 338 SAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVR 517
S + L + ++ +++++ + L H PV V++ P T LL+C ++
Sbjct: 235 SGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLK 294
Query: 518 LWSLQCWTCLVVYRGH--VWPVWDVRWSPHGHYF--ASSGHDRTARLWATD 658
LW + + + + V W P SS +R +W TD
Sbjct: 295 LWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTD 345
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 563 HVWPVWDVRWSPHGHYFASSGHDRTARLW 649
H VW V++S G Y A++ D TA +W
Sbjct: 223 HKNEVWFVQFSNSGKYLATASSDCTAIIW 251
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Frame = +2
Query: 401 EKDRDTCRNLFGHSGPVYKVAF-DPFKTMLLSCSEDTTVRLWSLQCWTC----LVVYRGH 565
E +R + R + H+ V V F D ++LS S+D ++W +C+ V GH
Sbjct: 259 EANRVSLRTV-AHTSDVNTVCFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGH 317
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
+ V + G YF S+G D+T +LW
Sbjct: 318 LEGVTFIDSRGDGRYFISNGKDQTIKLW 345
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
+ L GHS V F + S S D T+R+W L C+ V G + P + +R+ P
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIYG-ISPQYCIRFHPV 268
Query: 602 GHYFASSGH 628
+ F S+G+
Sbjct: 269 NNNFLSAGN 277
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 560 GHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
GH V D +S + Y ASS D+T R+W
Sbjct: 214 GHSKDVTDFDFSSNNQYIASSSLDKTIRVW 243
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +2
Query: 485 LLSCSEDTTVRLWSLQC--WTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+++ SED+ V + L TC+ +GH +PV V W+ + ASS +W
Sbjct: 419 IVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKT---MLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
GHS PV VA+ P L+S S+D+ L + + + + GH VW +
Sbjct: 9 GHSRPVVDVAYSPVTPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNA 68
Query: 605 HYFASSGHDRTARLW 649
AS+ D TA++W
Sbjct: 69 IRAASASADFTAKIW 83
Score = 34.7 bits (76), Expect = 0.056
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +2
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
ED V + Q + +GH PV VR++P G + S D T R+W
Sbjct: 243 EDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
GH GPV+ V + P S SED TVR+W
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 419 CRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW-SLQCWTCLVVYRGHVWPVWDVRWS 595
CR L GH+G VY + + P + ++S S+D + +W +L + W V +S
Sbjct: 58 CRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW-VMTCAFS 116
Query: 596 PHGHYFASSGHDRTARLWA 652
P+G A G D +++
Sbjct: 117 PNGQSVACGGLDSVCSIFS 135
Score = 33.9 bits (74), Expect = 0.098
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYR----GHVWPVWDVR 589
R GH G V V F P + S+D T RL+ ++ L VY+ G PV +
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 590 WSPHGH-YFASSGHDRTARLWAT 655
+S G FA + T +W T
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDT 324
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTM-LLSCSEDTTVRLWSLQCWTCLVVY-----RGHVWPVWD 583
R L GH G V + P + L++ S D T LW + V+ GH V
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 584 VRWS-PHGHYFASSGHDRTARLWAT 655
V S + ++F S D TARLW T
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDT 234
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +2
Query: 419 CRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW-SLQCWTCLVVYRGHVWPVWDVRWS 595
CR L GH+G VY + + P + ++S S+D + +W +L + W V +S
Sbjct: 58 CRTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAW-VMTCAFS 116
Query: 596 PHGHYFASSGHDRTARLWA 652
P+G A G D +++
Sbjct: 117 PNGQSVACGGLDSVCSIFS 135
Score = 33.9 bits (74), Expect = 0.098
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYR----GHVWPVWDVR 589
R GH G V V F P + S+D T RL+ ++ L VY+ G PV +
Sbjct: 242 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 301
Query: 590 WSPHGH-YFASSGHDRTARLWAT 655
+S G FA + T +W T
Sbjct: 302 FSVSGRLLFAGYASNNTCYVWDT 324
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTM-LLSCSEDTTVRLWSLQCWTCLVVY-----RGHVWPVWD 583
R L GH G V + P + L++ S D T LW + V+ GH V
Sbjct: 150 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 209
Query: 584 VRWS-PHGHYFASSGHDRTARLWAT 655
V S + ++F S D TARLW T
Sbjct: 210 VSISGSNPNWFISGSCDSTARLWDT 234
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 467 DPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARL 646
+P+ +++ TV +W LV + H PV V + P+GH A+SG +R ++
Sbjct: 248 NPYNSVVGLGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKI 307
Query: 647 W 649
W
Sbjct: 308 W 308
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ 532
H GPV VAF P ++ + ++ +++W L+
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDLR 311
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 37.9 bits (84), Expect = 0.006
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Frame = +2
Query: 254 DSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKD---RDTCR 424
DS+ + G N+ + + P+K K EK + + R+ + ++ K +T +
Sbjct: 302 DSSCVYFGMNDKS----QIEPLKTENEK-IEKSRGLLRKKSESTCAVLPSKVFSISETPQ 356
Query: 425 NLF-GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL-QCWTCLVVYRGHVWPVWDVRWSP 598
+ F GH+G + +++ K LLS S D TVRLW + C+ V+ H V V ++P
Sbjct: 357 HEFRGHTGEILDLSWSE-KGFLLSSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNP 414
Query: 599 -HGHYFASSGHDRTARLW 649
+YF S D R+W
Sbjct: 415 VDDNYFISGSIDGKVRIW 432
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPF-KTMLLSCSEDTTVRLWSL 529
D VR+ D C +F H V VAF+P +S S D VR+W +
Sbjct: 383 DETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDV 434
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 37.9 bits (84), Expect = 0.006
Identities = 43/147 (29%), Positives = 57/147 (38%), Gaps = 7/147 (4%)
Frame = +2
Query: 206 TLLNSGHTAISCDICDDSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAGDVL 385
TLL SG S D C G +NI +TL PI++ + L + D
Sbjct: 75 TLLASG----SIDHCVKLYKFPSGEFQTNITRFTL-PIRVLAFNGSGSL--LAAAGDDEG 127
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRG- 562
++++ D R L GH GPV + F P +L S TV W LQ +G
Sbjct: 128 IKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGV 187
Query: 563 ------HVWPVWDVRWSPHGHYFASSG 625
+ V RWSP G A G
Sbjct: 188 APDTGFNTSIVNIPRWSPDGRTLAVPG 214
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 545 LVVYRG-HVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
L RG H+ + + W+P+G Y A+SG D+ LW D
Sbjct: 230 LFALRGDHLEAICYLTWAPNGKYIATSGLDKQVLLWDVD 268
Score = 31.5 bits (68), Expect = 0.52
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 446 PVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSG 625
P+ +AF+ ++L + +D ++L + + + V +GH PV + + P+G AS
Sbjct: 106 PIRVLAFNGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASID 165
Query: 626 HDRTARLW 649
T W
Sbjct: 166 TTGTVLCW 173
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 37.5 bits (83), Expect = 0.008
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = +2
Query: 434 GHSGPVYKVAFDP-FKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHY 610
GH V +A +P + + S S D +RLW + + + GH V + S G+
Sbjct: 54 GHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNV 113
Query: 611 FASSGHDRTARLW 649
S G D T RLW
Sbjct: 114 LVSCGTDCTVRLW 126
Score = 35.1 bits (77), Expect = 0.042
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +2
Query: 335 KSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTV 514
K+ L+ I + D +R+ + R T GH G V + +L+SC D TV
Sbjct: 64 KNPNYLKGIFSASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTV 123
Query: 515 RLWSL 529
RLW++
Sbjct: 124 RLWNV 128
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
V++ HV V D+ +SP G F + +DR+ R++
Sbjct: 274 VHKDHVSAVMDIDFSPTGREFVTGSYDRSVRIF 306
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = +2
Query: 413 DTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRW 592
D L GH V + + L S D + +W+ ++ Y H V + W
Sbjct: 326 DHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAW 385
Query: 593 SPHGHYFASSG---HDRTARLWAT 655
SPH H +SG DR R W T
Sbjct: 386 SPHVHGLLASGGGTADRCIRFWNT 409
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHYFASSGHDRT 637
AF L S D TV++ + CL + GH W VR+ P H AS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 638 ARLW 649
RLW
Sbjct: 170 VRLW 173
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP-HGHYFASSGHDRT 637
AF L S D TV++ + CL + GH W VR+ P H AS D
Sbjct: 110 AFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHE 169
Query: 638 ARLW 649
RLW
Sbjct: 170 VRLW 173
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
ED VR++ + +GH PV VR++P G +AS D T R+W T
Sbjct: 248 EDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
GH GPV+ V F P S SED T+R+W
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 33.9 bits (74), Expect = 0.098
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 395 MEEKDRDTCRNLFGHSGPVYKVAFDPFKT---MLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
ME+K + GHS PV + + P L+S S+D+ L + + + + GH
Sbjct: 1 MEKKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGH 60
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
VW + AS+ D +A+LW
Sbjct: 61 KGAVWSSCLDNNALRAASASADFSAKLW 88
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 500 EDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
ED VR++ + +GH PV VR++P G +AS D T R+W T
Sbjct: 248 EDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 34.7 bits (76), Expect = 0.056
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
GH GPV+ V F P S SED T+R+W
Sbjct: 268 GHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 33.9 bits (74), Expect = 0.098
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Frame = +2
Query: 395 MEEKDRDTCRNLFGHSGPVYKVAFDPFKT---MLLSCSEDTTVRLWSLQCWTCLVVYRGH 565
ME+K + GHS PV + + P L+S S+D+ L + + + + GH
Sbjct: 1 MEKKKVTIPQVCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGH 60
Query: 566 VWPVWDVRWSPHGHYFASSGHDRTARLW 649
VW + AS+ D +A+LW
Sbjct: 61 KGAVWSSCLDNNALRAASASADFSAKLW 88
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVR-WSPH 601
+L GHSG V F ML S S D T+++W L C++ + H V + W
Sbjct: 253 SLEGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWD-- 308
Query: 602 GHYFASSGHDRTARLWA 652
SS D T ++WA
Sbjct: 309 -KCLISSSLDGTIKVWA 324
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 35.9 bits (79), Expect = 0.024
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +2
Query: 404 KDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWD 583
K + + + L GH+ V +A P LS S D ++RLW+L L+ GH V+
Sbjct: 178 KGKTSLQTLSGHTDTVRGLAVMP-DLGFLSASHDGSIRLWALS-GEVLLEMVGHTSLVYS 235
Query: 584 VRWSPHGHYFASSGHDRTARLW 649
V G S+ DR A++W
Sbjct: 236 VDAHSSG-LIVSASEDRHAKIW 256
Score = 31.1 bits (67), Expect = 0.69
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H P+ V P L+S S D +++LW + T L GH V + P F
Sbjct: 150 HQSPIQAVIRLP-SGELVSGSSDASLKLWKGK--TSLQTLSGHTDTVRGLAVMPDLG-FL 205
Query: 617 SSGHDRTARLWA 652
S+ HD + RLWA
Sbjct: 206 SASHDGSIRLWA 217
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 35.9 bits (79), Expect = 0.024
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +2
Query: 404 KDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWD 583
K + + + L GH+ V +A P LS S D ++RLW+L L+ GH V+
Sbjct: 178 KGKTSLQTLSGHTDTVRGLAVMP-DLGFLSASHDGSIRLWALS-GEVLLEMVGHTSLVYS 235
Query: 584 VRWSPHGHYFASSGHDRTARLW 649
V G S+ DR A++W
Sbjct: 236 VDAHSSG-LIVSASEDRHAKIW 256
Score = 31.1 bits (67), Expect = 0.69
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H P+ V P L+S S D +++LW + T L GH V + P F
Sbjct: 150 HQSPIQAVIRLP-SGELVSGSSDASLKLWKGK--TSLQTLSGHTDTVRGLAVMPDLG-FL 205
Query: 617 SSGHDRTARLWA 652
S+ HD + RLWA
Sbjct: 206 SASHDGSIRLWA 217
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 35.9 bits (79), Expect = 0.024
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
D ++++ T FGH PV +A P L++ S D+TV LW +
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRI 2697
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 35.5 bits (78), Expect = 0.032
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
YRGH V ++WS G AS G+D +W
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 293
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 485 LLSCSEDTTVRLWSLQCWTC--LVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+L+ + D TV LW + LV PV + W+P G + A ++ +LW
Sbjct: 153 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 209
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 35.5 bits (78), Expect = 0.032
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
YRGH V ++WS G AS G+D +W
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIW 283
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 485 LLSCSEDTTVRLWSLQCWTC--LVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+L+ + D TV LW + LV PV + W+P G + A ++ +LW
Sbjct: 143 VLAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLW 199
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 35.5 bits (78), Expect = 0.032
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 455 KVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDR 634
K+ + +L + ++D +RL+ + + +RGH + D+ +S G + SS D
Sbjct: 520 KIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDG 579
Query: 635 TARLW 649
+ R+W
Sbjct: 580 SLRIW 584
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTC---LVVYR-GHVWPVWDVRWSPHG 604
H + + F + +L+S S D ++++W L+ +R GH P +R+ +G
Sbjct: 267 HDSSIISLNFLANEPVLMSASADNSLKMWIFDTNDGDPRLLRFRSGHSAPPLCIRFYSNG 326
Query: 605 HYFASSGHDRTARLWA 652
+ S+G DR RL++
Sbjct: 327 RHILSAGQDRAFRLFS 342
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 35.1 bits (77), Expect = 0.042
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTML--LSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG-- 604
H+G V +AF L ++C ED T+++W L + GH PV+ V PH
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV--CPHQKE 520
Query: 605 --HYFASSGHDRTARLWATDH 661
+ S+ D + W D+
Sbjct: 521 NIQFIFSTAVDGKIKAWLYDN 541
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 35.1 bits (77), Expect = 0.042
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTML--LSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG-- 604
H+G V +AF L ++C ED T+++W L + GH PV+ V PH
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTFEGHEAPVYSV--CPHQKE 520
Query: 605 --HYFASSGHDRTARLWATDH 661
+ S+ D + W D+
Sbjct: 521 NIQFIFSTAVDGKIKAWLYDN 541
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 34.7 bits (76), Expect = 0.056
Identities = 23/82 (28%), Positives = 32/82 (39%)
Frame = +2
Query: 413 DTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRW 592
D L GH V +AF +L S D V+++ T V G + VRW
Sbjct: 104 DWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRW 163
Query: 593 SPHGHYFASSGHDRTARLWATD 658
P GH + D + +W D
Sbjct: 164 HPRGHIVLAGSEDCSLWMWNAD 185
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
K + C+ T V +W C+ Y GH V + S + + S D TAR++
Sbjct: 341 KYLATGCANGT-VSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVF 397
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 34.3 bits (75), Expect = 0.074
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP 598
GH+G V ++ D + S S D +VR+W ++ CL V++ + V W+P
Sbjct: 421 GHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFDE-AIMCVAWNP 474
Score = 30.7 bits (66), Expect = 0.91
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 539 TCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
+C + Y+GH V + G + AS D + R+W +
Sbjct: 414 SCYLEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVE 453
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 33.9 bits (74), Expect = 0.098
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYR----GHVWPVWDVR 589
R GH G V V F P + S+D T RL+ ++ L VY+ G PV +
Sbjct: 180 RTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIA 239
Query: 590 WSPHGH-YFASSGHDRTARLWAT 655
+S G FA + T +W T
Sbjct: 240 FSVSGRLLFAGYASNNTCYVWDT 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTM-LLSCSEDTTVRLWSLQCWTCLVVY-----RGHVWPVWD 583
R L GH G V + P + L++ S D T LW + V+ GH V
Sbjct: 88 RMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLS 147
Query: 584 VRWS-PHGHYFASSGHDRTARLWAT 655
V S + ++F S D TARLW T
Sbjct: 148 VSISGSNPNWFISGSCDSTARLWDT 172
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 33.9 bits (74), Expect = 0.098
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 437 HSGPVYKVAFDP-FKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG-HY 610
H+ V +A++ F+ +L S S D V++W + TC + H V V W+ +
Sbjct: 232 HTRSVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 291
Query: 611 FASSGHDRTARL 646
S D+T L
Sbjct: 292 LLSGSFDQTVVL 303
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTA 640
AF P +L + + + V++W ++ + + GH V + +S +G++ A++ D
Sbjct: 360 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GV 418
Query: 641 RLW 649
RLW
Sbjct: 419 RLW 421
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ---CWTCLVVYRGHVWPVWDVRWSP 598
L GHS V V F ++L+ S D TVR+W + C H V V P
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 599 HGHYFASSGHDRT 637
YF S+ D T
Sbjct: 320 TNKYFVSASLDGT 332
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 383 LVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ 532
+V++ + K + GH+G V ++F L + +ED VRLW L+
Sbjct: 376 VVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDLR 424
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 33.9 bits (74), Expect = 0.098
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTA 640
AF P +L + + + V++W ++ + + GH V + +S +G++ A++ D
Sbjct: 360 AFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GV 418
Query: 641 RLW 649
RLW
Sbjct: 419 RLW 421
Score = 32.7 bits (71), Expect = 0.23
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ---CWTCLVVYRGHVWPVWDVRWSP 598
L GHS V V F ++L+ S D TVR+W + C H V V P
Sbjct: 260 LTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHP 319
Query: 599 HGHYFASSGHDRT 637
YF S+ D T
Sbjct: 320 TNKYFVSASLDGT 332
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 383 LVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ 532
+V++ + K + GH+G V ++F L + +ED VRLW L+
Sbjct: 376 VVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRLWDLR 424
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.9 bits (74), Expect = 0.098
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 437 HSGPVYKVAFD-PFKTMLLS-CSEDTTVRLWSLQCWTCLVVYRGHVWPVWDV--RWSPHG 604
H G V +AF P K + ++ C +D T+++W + GH PV+ + + +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 605 HYFASSGHDRTARLWATDH 661
+ S+ D + W D+
Sbjct: 521 QFIFSTALDGKIKAWLYDN 539
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9
WD-40 repeats domain (PF00400) (6 weak)
Length = 1120
Score = 33.9 bits (74), Expect = 0.098
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 437 HSGPVYKVAFD-PFKTMLLS-CSEDTTVRLWSLQCWTCLVVYRGHVWPVWDV--RWSPHG 604
H G V +AF P K + ++ C +D T+++W + GH PV+ + + +
Sbjct: 461 HVGGVNDIAFSTPNKQLCVTTCGDDKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENI 520
Query: 605 HYFASSGHDRTARLWATDH 661
+ S+ D + W D+
Sbjct: 521 QFIFSTALDGKIKAWLYDN 539
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
LF + PV + P ++ +D L + +GH+ + W P+G
Sbjct: 273 LFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGV 332
Query: 608 YFASSGHDRTARLWAT 655
FA+ D+T R+W T
Sbjct: 333 TFATGNQDKTCRIWDT 348
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 392 MMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT-CLVVYRGHV 568
+++ + T L GH + A+ P + ++D T R+W + + + V +G++
Sbjct: 303 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 362
Query: 569 WPVWDVRWSPHGHYFA 616
V +R++ G Y A
Sbjct: 363 GAVRSIRFTSDGRYVA 378
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/76 (25%), Positives = 32/76 (42%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGH 607
LF + PV + P ++ +D L + +GH+ + W P+G
Sbjct: 267 LFRYLWPVNHSSLSPDGKLVAVVGDDPDGLLVDTSNGQTIGTLKGHLDYSFASAWHPNGV 326
Query: 608 YFASSGHDRTARLWAT 655
FA+ D+T R+W T
Sbjct: 327 TFATGNQDKTCRIWDT 342
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 392 MMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT-CLVVYRGHV 568
+++ + T L GH + A+ P + ++D T R+W + + + V +G++
Sbjct: 297 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 356
Query: 569 WPVWDVRWSPHGHYFA 616
V +R++ G Y A
Sbjct: 357 GAVRSIRFTSDGRYVA 372
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 437 HSGPVYKVAFDP-FKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYF 613
H+ V +A++ F+ +L S S D V++W + TC + H V V W+ +
Sbjct: 264 HTESVLGLAWNKEFRNILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEV 323
Query: 614 ASSG 625
SG
Sbjct: 324 LLSG 327
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 437 HSGPVYKVAFD-PFKTM-LLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDV--RWSPHG 604
H G V ++F P K + +++C +D T+++W + GH PV+ V + +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 605 HYFASSGHDRTARLWATDH 661
+ S+ D + W D+
Sbjct: 521 QFIFSTALDGKIKAWLYDN 539
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 437 HSGPVYKVAFD-PFKTM-LLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDV--RWSPHG 604
H G V ++F P K + +++C +D T+++W + GH PV+ V + +
Sbjct: 461 HVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENI 520
Query: 605 HYFASSGHDRTARLWATDH 661
+ S+ D + W D+
Sbjct: 521 QFIFSTALDGKIKAWLYDN 539
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLL-SCSEDTTVRLWSLQCWTC----LVVYRGHVWPVWDVR 589
+L GH+ V + + LL S D V +W++ W+ + + H PV DV+
Sbjct: 155 SLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNV--WSNDKKKVRAFLHHNAPVKDVK 212
Query: 590 WSPHGHYFASSGHDRTARLW 649
WS G S G+D T+RL+
Sbjct: 213 WSKQGLSLLSCGYDCTSRLF 232
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 33.1 bits (72), Expect = 0.17
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW--SLQCWTCLVVYRGHVWPV 577
L GH+ V +A +L S S D TVRLW S + ++CL + GH+ PV
Sbjct: 301 LRGHTESVLCLAV--VSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPV 350
Score = 27.9 bits (59), Expect = 6.4
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 362 DREAGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT 541
DR A ++ + E R + H V +A T+L S S D T+++W +
Sbjct: 139 DRFAKCLMPKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFK 198
Query: 542 CLVVY-RGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
CL + H + V S +G + S D+ ++W
Sbjct: 199 CLESFTNAHDDAINAVALSENGDIYTGSS-DQRIKVW 234
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 482 MLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSP 598
+L+S S D T+R+W L+ +++ HV PV + SP
Sbjct: 551 VLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILSP 589
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 32.7 bits (71), Expect = 0.23
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 15/147 (10%)
Frame = +2
Query: 260 TLLAVGFNNSNIKVWTLTPIK-LRGMK-----------SAEKLQDIDREAGDVLVRMMEE 403
T LA+G ++ +++W + K +R M+ S+ L R+ +L R +
Sbjct: 222 THLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWSSSVLSSGSRDKS-ILQRDIRT 280
Query: 404 KDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWD 583
++ D L GH + + + L S D + +W+ ++ + H V
Sbjct: 281 QE-DHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKA 339
Query: 584 VRWSPHGHYFASSG---HDRTARLWAT 655
+ WSPH +SG DR R W T
Sbjct: 340 IAWSPHHFGLLASGGGTADRCIRFWNT 366
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +2
Query: 398 EEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPV 577
E ++ R+ H ++ +++ + LL+ S D T+++W ++ C V GH V
Sbjct: 114 ENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTV 173
Query: 578 WDVRWSP-HGHYFASSGHDRTARLW 649
+ P + S D LW
Sbjct: 174 KSMCSHPTNSDLLVSGSRDGCFALW 198
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 371 AGDVLVRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKT-MLLSCSEDTTVRLWSLQC 535
+GD +++ + ++ L GH+G V + P + +L+S S D LW L+C
Sbjct: 147 SGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLRC 202
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +2
Query: 455 KVAFDPFKTMLLSCSEDTTVRLWSL-QCWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGH 628
+ P +LS S D +W + + ++ +GH + V V WSP A++
Sbjct: 343 RTMISPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASD 402
Query: 629 DRTARLWATDHH 664
D T RLW +++
Sbjct: 403 DFTVRLWNIENN 414
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 32.7 bits (71), Expect = 0.23
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 551 VYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWA--TDH 661
+Y H +P R+SP+G + AS T R+W DH
Sbjct: 51 IYGEHAYPATVARYSPNGEWIASGDVSGTVRIWGAYNDH 89
Score = 30.7 bits (66), Expect = 0.91
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
GH G +Y V++ P +L+ S D + ++W +
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYR-----GHVWPVWDVRWSPH 601
HS V V F P + ++ S D ++ + TC ++ GH ++ V WSP
Sbjct: 186 HSNFVNCVRFAPDGSKFITVSSDKKGIIYDGK--TCEILGELSSDDGHKGSIYAVSWSPD 243
Query: 602 GHYFASSGHDRTARLW 649
G + D++A++W
Sbjct: 244 GKQVLTVSADKSAKIW 259
>At2g19540.1 68415.m02283 transducin family protein / WD-40 repeat
family protein contains WD-40 repeats (PF00400); similar
to Glutamate-rich WD repeat protein (GRWD)
(SP:Q9BQ67)[Homo sapiens]
Length = 469
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKT-MLLSCSEDTTVRLW--SLQCWTC-LVVYRGHVWPVWDVRW 592
N GH Y + + P LLS + + LW + W + + GH V D++W
Sbjct: 218 NFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPIPFAGHTASVEDLQW 277
Query: 593 SP-HGHYFASSGHDRTARLW 649
SP + FAS D + +W
Sbjct: 278 SPAEENVFASCSVDGSVAVW 297
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDH 661
Y GH V ++WS G AS G+D +W DH
Sbjct: 214 YLGHTEEVCGLKWSESGKKLASGGNDNVVHIW--DH 247
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 518 LWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
LW + GH V + SP G AS+ D T RLW
Sbjct: 339 LWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 382
>At2g31300.1 68415.m03821 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
identical to putative ARP2/3 protein complex subunit p41
(GI:4432825)[Arabidopsis thaliana]; similar to ARP2/3
complex 41 kDa subunit (P41-ARC) (Actin-related protein
2/3 complex subunit 1B) (SP:Q9WV32) [Mus musculus]
Length = 378
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLW---SLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHD 631
A+ P +M+ C +T V ++ S W L V + H V + WS + + HD
Sbjct: 17 AWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHD 76
Query: 632 RTARLWATD 658
R + +W+ +
Sbjct: 77 RNSYVWSLE 85
>At2g30910.2 68415.m03768 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLW---SLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHD 631
A+ P +M+ C +T V ++ S W L V + H V + WS + + HD
Sbjct: 17 AWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHD 76
Query: 632 RTARLWATD 658
R + +W+ +
Sbjct: 77 RNSYVWSLE 85
>At2g30910.1 68415.m03767 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400) (1
weak); similar to ARP2/3 complex 41 kDa subunit
(P41-ARC) (Actin-related protein 2/3 complex subunit 1B)
(SP:O88656) [Rattus norvegicus]
Length = 378
Score = 32.3 bits (70), Expect = 0.30
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLW---SLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHD 631
A+ P +M+ C +T V ++ S W L V + H V + WS + + HD
Sbjct: 17 AWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVSHD 76
Query: 632 RTARLWATD 658
R + +W+ +
Sbjct: 77 RNSYVWSLE 85
>At1g64350.1 68414.m07292 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to nuclear pore protein SEH1 (SP:P53011)
[Saccharomyces cerevisiae]
Length = 326
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 560 GHVWPVWDVRWSPHGHYFASSGHDRTARLWATD 658
GH VW + W G AS+G D +LW ++
Sbjct: 278 GHQGEVWQMEWDMSGMTLASTGSDGMVKLWQSN 310
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
+L GH G V+++ +D L S D V+LW
Sbjct: 275 SLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 31.9 bits (69), Expect = 0.39
Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 3/84 (3%)
Frame = +2
Query: 413 DTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRW 592
D L GH V + + L S D + +W+ ++ H V + W
Sbjct: 289 DFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITW 348
Query: 593 SPHGHYFASSG---HDRTARLWAT 655
SPH +SG DR R W T
Sbjct: 349 SPHQSSLLASGGGTADRCIRFWNT 372
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFA 616
H PV A+ T + S D ++W L V H P+ + W P + A
Sbjct: 71 HDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLA 130
Query: 617 SSGHDRTARLWAT 655
+ D+T + W T
Sbjct: 131 TGSWDKTLKYWDT 143
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 5/72 (6%)
Frame = +2
Query: 449 VYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYR-----GHVWPVWDVRWSPHGHYF 613
+ ++F P +L++ S D VR W + + H PV W G
Sbjct: 28 ISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTV 87
Query: 614 ASSGHDRTARLW 649
S G D+ A++W
Sbjct: 88 FSGGCDKQAKMW 99
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 31.9 bits (69), Expect = 0.39
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT-CLVVYRGHVWPVWDVRWSPH 601
+L GH + A+ P +L + ++DT RLW ++ + V +G++ + ++++P
Sbjct: 285 SLRGHKDYSFASAWHPNGLILATGNQDTACRLWDIRNPSESFAVLKGNMGAIRGLKFTPE 344
Query: 602 GHYFA 616
G + A
Sbjct: 345 GRFLA 349
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
Y GH V ++WS G AS G+D +W
Sbjct: 232 YVGHTEEVCGLKWSESGKKLASGGNDNVVHIW 263
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 518 LWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
LW + GH V + SP G AS+ D T RLW
Sbjct: 356 LWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLW 399
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 31.5 bits (68), Expect = 0.52
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
Y GH V ++WS G+ AS G+D +W
Sbjct: 248 YLGHTEEVCGLKWSESGNKQASGGNDNVVHIW 279
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 518 LWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
LW + + GH V + SP+G AS+ D RLW
Sbjct: 372 LWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 415
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 31.5 bits (68), Expect = 0.52
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 386 VRMMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTC 544
+R + D R GH V + P +S S D +VRLW L+ C
Sbjct: 96 LRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDLRVNAC 148
>At3g56900.1 68416.m06329 aladin-related / adracalin-related weak
similarity to SP|Q9NRG9 Aladin (Adracalin) (GL003) {Homo
sapiens}; non-consensus AT-AC splice sites at intron 6
Length = 447
Score = 31.5 bits (68), Expect = 0.52
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 458 VAFDPFKTMLLSCSEDTT-VRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDR 634
+++ P L S S D++ +W + + RG + + ++WSP G YF ++ D
Sbjct: 218 LSWSPCGRYLASASYDSSSFTIWDVSQGAGTPIRRG-LGGISMLKWSPTGDYFFAARFDG 276
Query: 635 TARLWATD 658
T LW T+
Sbjct: 277 TFCLWETN 284
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 31.5 bits (68), Expect = 0.52
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Frame = +2
Query: 404 KDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY-RGHVWPVW 580
K D L GH G V V F+ +L+S S+D + LW+ + + Y GH V+
Sbjct: 43 KKLDLYGKLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVF 102
Query: 581 DVRWSP--HGHYFASSGHDRTARL 646
++ P +SG D RL
Sbjct: 103 QTKFIPFTDDRTIITSGADGQVRL 126
>At2g47800.1 68415.m05966 glutathione-conjugate transporter (MRP4)
identical to AtMRP4 GI:2959767 from [Arabidopsis
thaliana]
Length = 1516
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = -1
Query: 390 LTSTSPASLSISCSFSADFIPRSLMGVNVHTFMFELLNPTAKRVESSQISQLIAVC 223
L S+SP +SCS+SA S + V + F LL+P +R S + + +C
Sbjct: 3 LLSSSPWLSELSCSYSAVVEHTSSVPVPIQWLRFVLLSPCPQRALFSAVDFIFLLC 58
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 31.5 bits (68), Expect = 0.52
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT-CLVVYRGHVWPVWDVRWSPHG 604
L GH + A+ P +L + ++DTT RLW ++ + L V +G++ + +R++ G
Sbjct: 315 LEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLSQSLKVLKGNMGAIRALRFTSDG 374
Query: 605 HYFA 616
+ A
Sbjct: 375 RFLA 378
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 560 GHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
GH+ + W P+G A+ D T RLW
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLW 346
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 31.1 bits (67), Expect = 0.69
Identities = 15/63 (23%), Positives = 33/63 (52%)
Frame = +2
Query: 461 AFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTA 640
AF P +L + + + V++W ++ + + GH + + +S +G++ A++ D
Sbjct: 361 AFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GV 419
Query: 641 RLW 649
RLW
Sbjct: 420 RLW 422
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +2
Query: 428 LFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQ---CWTCLVVYRGHVWPVWDVRWSP 598
L GHS V + F ++L+ S D TVR+W +T + H V V
Sbjct: 260 LTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Query: 599 HGHYFASSGHDRT 637
YF S+ D T
Sbjct: 320 TNKYFVSASLDST 332
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 30.7 bits (66), Expect = 0.91
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Frame = +2
Query: 428 LFGHSGPVYKVAF----DPFKTMLLSCSEDTTVRLW------SLQCWTCLVVY---RGHV 568
L GHSG + VA D + + S+D T+RL+ S+ T + Y RGH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 569 WPVWDVRWSPHGHYFASSGHDRTARLWATD 658
V V G+ SS D T LW T+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNTN 235
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 30.7 bits (66), Expect = 0.91
Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Frame = +2
Query: 428 LFGHSGPVYKVAF----DPFKTMLLSCSEDTTVRLW------SLQCWTCLVVY---RGHV 568
L GHSG + VA D + + S+D T+RL+ S+ T + Y RGH
Sbjct: 146 LEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGHK 205
Query: 569 WPVWDVRWSPHGHYFASSGHDRTARLWATD 658
V V G+ SS D T LW T+
Sbjct: 206 ASVQSVSAQKSGNMVCSSSWDCTINLWNTN 235
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 30.7 bits (66), Expect = 0.91
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYKVAF-DPFKTMLLSCSEDTTVRLWSLQCWTCLVV 553
D +V++ + + H + V F + T L S S+D +V+LW++ CL
Sbjct: 775 DGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGT 834
Query: 554 YRGHVWPVWDVRWSPHGHYFASSG 625
R ++ V V++SP + + G
Sbjct: 835 IR-NIANVCCVQFSPQSSHLLAFG 857
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 30.7 bits (66), Expect = 0.91
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Frame = +2
Query: 275 GFNNSNIKVWTLTPIKLRGMKSAEKLQDI-DREAGDVLVRMMEEKDRDTCRNLFGHSGPV 451
G + I+VW ++P K + L + D + R E + H+ V
Sbjct: 150 GHQDGKIRVWKVSPKNQSLHKRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAV 209
Query: 452 YKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHD 631
++ + + +L S S D T+++W + CL H V V + F+ S D
Sbjct: 210 SCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIVFSGSA-D 268
Query: 632 RTARLWATD 658
T + W D
Sbjct: 269 GTVKAWKRD 277
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 30.7 bits (66), Expect = 0.91
Identities = 18/75 (24%), Positives = 28/75 (37%)
Frame = +2
Query: 425 NLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG 604
N F PV + P +L ++ L L GH+ + W P G
Sbjct: 270 NQFRFPWPVNHTSLSPDGKLLTIVGDNPESLLVDPNTGKTLATLSGHLDFSFASAWHPDG 329
Query: 605 HYFASSGHDRTARLW 649
F++ D+T R+W
Sbjct: 330 FTFSTGNQDKTCRVW 344
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 416 TCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT-CLVVYRGHVWPVWDVRW 592
T L GH + A+ P + ++D T R+W ++ + + V RG++ + +R+
Sbjct: 309 TLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIRSIRY 368
Query: 593 SPHGHYFA 616
+ G Y A
Sbjct: 369 TSDGKYMA 376
>At3g56600.1 68416.m06294 phosphatidylinositol 3- and 4-kinase
family protein low similarity to 55 kDa type II
phosphatidylinositol 4-kinase [Rattus norvegicus]
GI:13660755; contains Pfam profile PF00454:
Phosphatidylinositol 3- and 4-kinase
Length = 533
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 347 KLQDIDREAGDVLVRMMEEKDRDTCRNLFG 436
++ ++DR AG++LV+ + ++D TC N G
Sbjct: 241 RVLNLDRHAGNMLVKKIHDQDETTCSNGVG 270
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
GH G +Y V++ P +L+ S D + ++W +
Sbjct: 94 GHKGSIYAVSWSPDSKRVLTVSADKSAKVWEV 125
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +2
Query: 482 MLLSCSEDTTVRLWSL---QCWTCLVVYRGHVWPV 577
+LLS S D TVR+W ++CL V GH PV
Sbjct: 338 LLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPV 372
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTC-LVVYRGHVWPVWDVRWSP 598
+ L H G V V+F+ +L+S S+D V LW Q L + GH V+ ++ P
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMP 112
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 392 MMEEKDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLW 523
M + D L GH V V+F P K++L + S D +R+W
Sbjct: 1 MSKRPPPDPVAVLRGHRHSVMDVSFHPSKSLLFTGSADGELRIW 44
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
H V++ P ++ S SED TV LW L
Sbjct: 349 HRATCNAVSYSPDCELMASASEDATVALWKL 379
>At4g29360.2 68417.m04195 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 488
Score = 29.9 bits (64), Expect = 1.6
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = -1
Query: 417 VSRSFSSIILT-STSPASLSISCSFSADFIPR-SLMGVNVHTFMFELLNPTAKRVESSQI 244
+S S S IL+ S P+S S S SA P + N FM +L A R + ++
Sbjct: 154 ISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYYAYRDSTEKV 213
Query: 243 SQLIAVCPLFSNV*KQIEGKLSGPS*TRFDASLSALPFSTLSISFRSGRGILSLGG 76
A+ S V G L FDA L A+ F+ ++SF++ + +++ G
Sbjct: 214 PLEYALFESSSQVVDPATGLLYS---NMFDAQLDAIYFALTAMSFKTVKVMVTESG 266
>At4g29360.1 68417.m04194 glycosyl hydrolase family 17 protein
similar to elicitor inducible chitinase Nt-SubE76
GI:11071974 from [Nicotiana tabacum]
Length = 534
Score = 29.9 bits (64), Expect = 1.6
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Frame = -1
Query: 417 VSRSFSSIILT-STSPASLSISCSFSADFIPR-SLMGVNVHTFMFELLNPTAKRVESSQI 244
+S S S IL+ S P+S S S SA P + N FM +L A R + ++
Sbjct: 154 ISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYYAYRDSTEKV 213
Query: 243 SQLIAVCPLFSNV*KQIEGKLSGPS*TRFDASLSALPFSTLSISFRSGRGILSLGG 76
A+ S V G L FDA L A+ F+ ++SF++ + +++ G
Sbjct: 214 PLEYALFESSSQVVDPATGLLYS---NMFDAQLDAIYFALTAMSFKTVKVMVTESG 266
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +2
Query: 416 TCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWT-CLVVYRGHVWPVWDVRW 592
T L GH + A+ P + ++D T R+W ++ + + V +G++ + +R+
Sbjct: 311 TLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIRY 370
Query: 593 SPHGHYFA 616
+ G Y A
Sbjct: 371 TSDGKYMA 378
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 437 HSGPVYKVAF--DPFKTMLLSCSEDTTVRLW 523
H GP Y V F + +LLSC +D VR W
Sbjct: 89 HEGPAYDVKFYGEDEDALLLSCGDDGRVRGW 119
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 434 GHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVV 553
GHS ++ V + +L+ SED T R+W + C+ V
Sbjct: 199 GHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKV 238
>At1g03420.1 68414.m00322 expressed protein similar to gb|T45484,
emb|Z30724, and emb|Z30531
Length = 171
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 512 VRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFAS 619
+R W + W C+VV RG W + + W G++ S
Sbjct: 96 LRFWRSEAWKCVVVLRG--WGLDQIGWRSVGNWVFS 129
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 27.5 bits (58), Expect(2) = 2.0
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 377 DVLVRMMEEKDRDTCRNLFGHSGPVYK-VAFDPFKTMLLSCSEDTTVRLWS 526
D +++ + + L HS V + +D F LLSCS D TV++W+
Sbjct: 293 DKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQF---LLSCSLDNTVKIWA 340
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 218 SGHTAISCDICDDSTLLAVGFNNSNIKVWTL 310
+GHT + + L G + IKVW+L
Sbjct: 271 TGHTLAVVTLYVGANRLYSGSMDKTIKVWSL 301
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +2
Query: 503 DTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLWAT 655
D +RLW +Q L GH V V S +G+ +SG D ++ T
Sbjct: 378 DGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDT 428
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/96 (21%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +2
Query: 308 LTPIKLRGMKSAEKLQ--DIDREAGDVLVRMMEEKDRDTCRN-LFGHSGPVYKVAFDPFK 478
L +K G+++ + Q I R D +E TC N + H G + F+
Sbjct: 184 LAKLKANGLETLARQQVDGIVRRNEDGTDHFVESTIPSTCANRIHAHEGGCGSIVFEYNS 243
Query: 479 TMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDV 586
L + +D V++W T + G + + D+
Sbjct: 244 GTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDM 279
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 29.5 bits (63), Expect = 2.1
Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Frame = +2
Query: 275 GFNNSNIKVWTLT---PIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTCRNLFGHSG 445
G + I++W ++ P K + + + + + + + + M ++R++ + H+
Sbjct: 179 GHQDGKIRIWKVSKRKPGKHKRVGTLPTFKSMVKSSVNPKHFMEVRRNRNSVKTK--HND 236
Query: 446 PVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSG 625
V ++ D +L S S DTT+++W + CL H + V F S
Sbjct: 237 AVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVFTGSA 296
Query: 626 HDRTARLW 649
D T ++W
Sbjct: 297 -DGTVKVW 303
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCL-VVYRGHVWPVWDVRWSP 598
+ L GH G V +A++ ++L+S S+D + +W+ L + GH ++ ++ P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Query: 599 H--GHYFASSGHDRTARLWAT 655
S D RL+ T
Sbjct: 104 ETSDELVVSGAGDAEVRLFNT 124
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH-GHYFASSGHDRTARL 646
+ ++ S SED V++W + C V H V V W+ + S DRT L
Sbjct: 227 RNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 404 KDRDTCRNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSL 529
K+ L GH V + F P +++ S+D ++R+W++
Sbjct: 277 KEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 554 YRGHVWPVWDVRWSPHGHYFASSGHDRTARLWATDH 661
Y GH V ++WS G AS G+ +W DH
Sbjct: 245 YLGHTEEVCGLKWSESGKKLASGGNYNVVHIW--DH 278
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/44 (31%), Positives = 19/44 (43%)
Frame = +2
Query: 518 LWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
LW + + GH V + SP+G AS+ D RLW
Sbjct: 370 LWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLW 413
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 422 RNLFGHSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVY-RGHVWPVWDVRWSP 598
+ L H G V V+F+ +LLS S+D V LW Q + + + GH ++ ++ P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = +2
Query: 476 KTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHG-HYFASSGHDRTARLWA 652
K L S D V++W Y H W V +SP F S D + +LW+
Sbjct: 778 KNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 28.3 bits (60), Expect = 4.9
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Frame = +2
Query: 431 FGHSGPVYKVAFDPFK---TMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPH 601
F G VY+ A T++ + +ED VRL + GH V V WS
Sbjct: 142 FKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTS 201
Query: 602 GHY-FASSGHDRTARLW 649
+ + G D R W
Sbjct: 202 SEWVLYTGGCDGAIRFW 218
>At5g24520.3 68418.m02893 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 491 SCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+CS DTT +W ++ H V D+ W FAS D + R++
Sbjct: 150 TCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG-EARVFASVSADGSVRIF 201
>At5g24520.2 68418.m02892 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 491 SCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+CS DTT +W ++ H V D+ W FAS D + R++
Sbjct: 150 TCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG-EARVFASVSADGSVRIF 201
>At5g24520.1 68418.m02891 transparent testa glabra 1 protein (TTG1)
identical to transparent testa glabra 1 (Ttg1) protein
(GI:10177852) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies,1 weak);
Length = 341
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 491 SCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASSGHDRTARLW 649
+CS DTT +W ++ H V D+ W FAS D + R++
Sbjct: 150 TCSIDTTCTIWDIEKSVVETQLIAHDKEVHDIAWG-EARVFASVSADGSVRIF 201
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 27.9 bits (59), Expect = 6.4
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +2
Query: 221 GH-TAISCDICD-DSTLLAVGFNNSNIKVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRM 394
GH +++C + D +LL G + +I+VW+L I+L D R+ G+ L
Sbjct: 118 GHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL--IRL--------FDDFQRQQGNTLYE- 166
Query: 395 MEEKDRDTCRNLFGHSGPVYKVAFD--PFKTMLLSCSEDTTVRLWSL 529
N H+ V + D +++S SED T ++WSL
Sbjct: 167 ---------HNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSL 204
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 572 PVWDVRWSPHGHYFASSGHDRTARLW 649
PV ++ +S +G Y ++ HDRT R++
Sbjct: 218 PVKNIVFSRNGQYLLTNSHDRTIRIY 243
>At2g21830.1 68415.m02594 DC1 domain-containing protein contains
Pfam profilePF03107: DC1 domain
Length = 569
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +2
Query: 158 KRVQLGPDSLP--SICFYTLLNSGHTAISCDICD 253
KRV+ DSL +C TL+++GH SC+ CD
Sbjct: 308 KRVREEDDSLEYCGVC-ETLIHAGHHVYSCEECD 340
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Frame = +2
Query: 449 VYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLV-----VYRGHVWPVWDVRWSPHGHYF 613
+ ++F P +L++ S D VR W + + V H PV W G
Sbjct: 29 ISSLSFSPKADILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTV 88
Query: 614 ASSGHDRTARLW 649
+ G D+ A++W
Sbjct: 89 FTGGCDKQAKMW 100
>At5g42840.1 68418.m05221 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 671
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 585 TSQTGHTCPRYTTRHVQHCSDHNLTV 508
T Q H C + T R + HCSD L V
Sbjct: 78 TDQKCHLCGKKTKRLLYHCSDCKLNV 103
>At3g52550.1 68416.m05782 hypothetical protein
Length = 178
Score = 27.5 bits (58), Expect = 8.5
Identities = 30/104 (28%), Positives = 48/104 (46%)
Frame = +2
Query: 110 KEIDKVEKGKALREASKRVQLGPDSLPSICFYTLLNSGHTAISCDICDDSTLLAVGFNNS 289
+E DK EK K RE K + +SLP I ++ + ++IS I T+ V S
Sbjct: 54 EEEDKEEKEKEKRENEKEEEEEENSLPGI----MIPTSSSSISSTI---DTIEEVPETES 106
Query: 290 NIKVWTLTPIKLRGMKSAEKLQDIDREAGDVLVRMMEEKDRDTC 421
V ++G+KS+E+L + + ++ M KD TC
Sbjct: 107 IENV-------IKGIKSSERLIFERKGESNSILEEMRNKDSCTC 143
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 437 HSGPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWP 574
H G V K+A P ++ L+ S+D V+LW + + H WP
Sbjct: 2374 HLGSVTKIATIPRTSLFLTGSKDGEVKLWDAKAAKLI-----HHWP 2414
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/72 (18%), Positives = 28/72 (38%)
Frame = +2
Query: 443 GPVYKVAFDPFKTMLLSCSEDTTVRLWSLQCWTCLVVYRGHVWPVWDVRWSPHGHYFASS 622
G + +AF L + D +R++ + + + + WS G Y +
Sbjct: 304 GAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 623 GHDRTARLWATD 658
G D ++W+ +
Sbjct: 364 GEDDLVQVWSME 375
>At1g20630.1 68414.m02581 catalase 1 identical to catalase 1
GI:2511725 from [Arabidopsis thaliana]
Length = 492
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +2
Query: 281 NNSNIKVWTLTPIKLRGMKSAEKLQDIDRE 370
NNS++ V T PI L EKL + DRE
Sbjct: 28 NNSSLTVGTRGPILLEDYHLLEKLANFDRE 57
>At1g18310.1 68414.m02288 glycosyl hydrolase family 81 protein
similar to beta-glucan binding protein GI:6625560 from
[Phaseolus vulgaris]
Length = 649
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -1
Query: 522 HNLTVVSSEHESSIVLKGSNATL*TGPECPKRLRHVSRSFSSIILTSTSPAS 367
HN + I++ GSN GP R H+ SFS +++T P+S
Sbjct: 75 HNSDFFYEVFTADIIISGSN-----GPGPRSRKTHIISSFSDLVVTLDFPSS 121
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,633,278
Number of Sequences: 28952
Number of extensions: 345340
Number of successful extensions: 1842
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1739
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1403159472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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