Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0260
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   3.6  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    22   6.3  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    22   6.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.3  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = +3

Query: 495 LQAYEYIEASFTIADRIYGSTFFIATGFHGIHVIIGTLFLLICYIRHLNNHFSKNHH 665
           LQ  +Y+E +   + R+Y S  FI+       V    L L    I HL  H    HH
Sbjct: 59  LQEMKYLERAIKESLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHL--HIYDLHH 113


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 455 IIFNYFIRILFYYFTS 502
           + F +FI   FY+FT+
Sbjct: 237 VSFYFFISTFFYFFTT 252


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 455 IIFNYFIRILFYYFTS 502
           + F +FI   FY+FT+
Sbjct: 233 VSFYFFISTFFYFFTT 248


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 773 FFFFLINFLTN 741
           + FFL NFLTN
Sbjct: 243 WLFFLANFLTN 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,703
Number of Sequences: 336
Number of extensions: 2522
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)