Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0259
(663 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 232 2e-61
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 230 9e-61
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 229 2e-60
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 229 2e-60
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 228 3e-60
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 223 1e-58
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 221 3e-58
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 219 2e-57
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 214 6e-56
12_02_1282 + 27528159-27529148,27529549-27529614 155 4e-38
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 96 3e-20
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 90 1e-18
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 89 2e-18
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 72 4e-13
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 66 2e-11
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 65 5e-11
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 64 1e-10
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 63 2e-10
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 33 0.27
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 31 0.62
08_02_0238 + 14665813-14668798,14669088-14669125 29 3.3
07_03_0752 - 21241883-21242233,21242336-21242486,21242586-212428... 29 3.3
01_06_1741 + 39581656-39581680,39582627-39582697,39582779-395828... 29 3.3
07_03_0008 + 12303536-12303893,12303910-12304176,12304635-123049... 29 4.4
05_04_0437 + 21234261-21234592,21234929-21234997,21235506-212356... 28 7.6
03_05_1049 - 29956379-29956400,29957103-29957188,29957269-299574... 28 7.6
02_05_0615 - 30364956-30365729,30365813-30366286 28 7.6
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 232 bits (567), Expect = 2e-61
Identities = 105/118 (88%), Positives = 111/118 (94%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEI
Sbjct: 260 PEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEI 319
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWI+K EYDESGPSIVHRKCF
Sbjct: 320 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 230 bits (562), Expect = 9e-61
Identities = 104/118 (88%), Positives = 110/118 (93%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEI
Sbjct: 260 PEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEI 319
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 320 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 229 bits (560), Expect = 2e-60
Identities = 105/118 (88%), Positives = 110/118 (93%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEI
Sbjct: 257 PEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEI 316
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct: 317 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 374
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 229 bits (560), Expect = 2e-60
Identities = 103/118 (87%), Positives = 110/118 (93%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPS +GME+ GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEI
Sbjct: 260 PEVLFQPSMIGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMSKEI 319
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 320 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKDEYDESGPAIVHRKCF 377
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 228 bits (557), Expect = 3e-60
Identities = 103/118 (87%), Positives = 110/118 (93%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI
Sbjct: 263 PEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEI 322
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP+IVHRKCF
Sbjct: 323 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 380
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 223 bits (545), Expect = 1e-58
Identities = 100/118 (84%), Positives = 110/118 (93%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P +FQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI
Sbjct: 260 PEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI 319
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS+ EY+ESGP+IVHRKCF
Sbjct: 320 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEESGPAIVHRKCF 377
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 221 bits (541), Expect = 3e-58
Identities = 100/118 (84%), Positives = 106/118 (89%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPSF+GMEA GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGI DRM KEI
Sbjct: 259 PEVLFQPSFIGMEAPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIGDRMSKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 319 TALAPGSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPGIVHMKCF 376
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 219 bits (535), Expect = 2e-57
Identities = 99/118 (83%), Positives = 107/118 (90%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPS +GME+ GIHE TYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI
Sbjct: 259 PEVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
T+LAPS+MK+K+IAPPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVH KCF
Sbjct: 319 TSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPGIVHMKCF 376
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 214 bits (522), Expect = 6e-56
Identities = 104/132 (78%), Positives = 111/132 (84%), Gaps = 14/132 (10%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEI
Sbjct: 260 PEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEI 319
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQ--------------QMWISKQEYD 330
TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQ QMWISK EYD
Sbjct: 320 TALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNLTPTLYEVARMQMWISKGEYD 379
Query: 331 ESGPSIVHRKCF 366
ESGP+IVHRKCF
Sbjct: 380 ESGPAIVHRKCF 391
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 155 bits (375), Expect = 4e-38
Identities = 81/118 (68%), Positives = 85/118 (72%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQPSF+GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGGTTM+PGIADRM KEI
Sbjct: 260 PEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEI 319
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPS+MKIK MWI+K EYDESGPSIVHRKCF
Sbjct: 320 TALAPSSMKIK--------------------------MWIAKAEYDESGPSIVHRKCF 351
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 95.9 bits (228), Expect = 3e-20
Identities = 50/122 (40%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Frame = +1
Query: 19 ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITA 198
ALFQP LG+E GI S+ + + L NT+L GGT G DR Q+E
Sbjct: 278 ALFQPHILGLEDYGIVHQLVTSVSNVTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN- 336
Query: 199 LAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
L+ S + ++ PPE +YS W+GG+ILA + Q ++K +YDE+GPSIVH+K
Sbjct: 337 LSASAICPSLVKPPEYMPENLARYSAWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHKK 396
Query: 361 CF 366
CF
Sbjct: 397 CF 398
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/119 (35%), Positives = 65/119 (54%)
Frame = +1
Query: 10 LPRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 189
+P LF P LGM G+ E +I C ++ L+ +L+GG+T++P +R++KE
Sbjct: 310 VPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGSTLFPRFTERLEKE 369
Query: 190 ITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
+ L P ++KIIA + W GGS+LA F+ M I+K EY+E G R+ F
Sbjct: 370 LRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEEMGSMRCRRRFF 428
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/96 (42%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Frame = +1
Query: 46 MEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIK 225
M G+ +S+ +CDVDIRK+L ++ +LSGG++ + +R++KE+ + ++K
Sbjct: 374 MSVRGLPRMVIDSVNRCDVDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVK 433
Query: 226 IIAPP---ERKYSVWIGGSILASLSTFQQMWISKQE 324
++A ER++SVWIGGSILASL +FQQMW SK +
Sbjct: 434 VLASGNSVERRFSVWIGGSILASLGSFQQMWFSKAD 469
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 72.1 bits (169), Expect = 4e-13
Identities = 40/121 (33%), Positives = 70/121 (57%), Gaps = 10/121 (8%)
Frame = +1
Query: 22 LFQPSFLGMEACGIHETTYNSIMKC---DVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
LFQP G+ A G+H+ + C +V + Y VLSGG++ PG+++R++KE+
Sbjct: 362 LFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKEL 421
Query: 193 TALAPSTMK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-ISKQEYDE----SGPSIV 351
L P+ + I++I PP S W G +++++STF + W I K+++ + +GPS V
Sbjct: 422 RELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFV 481
Query: 352 H 354
+
Sbjct: 482 N 482
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 66.1 bits (154), Expect = 2e-11
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Frame = +1
Query: 13 PRALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 189
P F P + + + E + + +D R+DLY N VLSGG+TM+ R+Q +
Sbjct: 303 PEIFFHPEIYSADFSTPLPELIDSCVQSAPIDTRRDLYKNIVLSGGSTMFKDFHKRLQND 362
Query: 190 ITALAP--------------STMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEY 327
I + +++ ++A P + Y+ W GGS+ AS F + +K+EY
Sbjct: 363 IKKIVDERVAATNARHHVEVKPVEVNVVAHPIQSYAAWFGGSVAASNPEFYESCHTKEEY 422
Query: 328 DESGPSI 348
+E G SI
Sbjct: 423 EEHGASI 429
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 64.9 bits (151), Expect = 5e-11
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Frame = +1
Query: 13 PRALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 189
P F P + +H I +D R+ LY N VLSGG+TM+ R+Q++
Sbjct: 334 PEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRD 393
Query: 190 ITALAPSTM----------------KIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 321
+ + + + ++ +++ P ++Y+VW GGS+LAS + F + +K
Sbjct: 394 LKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKA 453
Query: 322 EYDESGPSI 348
EY+E G SI
Sbjct: 454 EYEEYGASI 462
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 63.7 bits (148), Expect = 1e-10
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKC--DVDIRKDLYANTVLSGGTTMYPGIADRMQK 186
P LFQP +G++ GI E S+ + D +++ L + +++GG ++ PG+ R++
Sbjct: 585 PEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSLIPGMIPRLES 644
Query: 187 EITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
I P +K++ + W G + A+ S F + S +Y E G ++ HRK
Sbjct: 645 GIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHRK 702
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 63.3 bits (147), Expect = 2e-10
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 11/104 (10%)
Frame = +1
Query: 10 LPRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 189
+ + + + +E G+ + + I + D+D R LY + VLSGG+TMYPG+ R++KE
Sbjct: 287 IDKTFVEQELIDVEGDGMADMAFRCIQEMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEKE 346
Query: 190 I------TALAPS-----TMKIKIIAPPERKYSVWIGGSILASL 288
+ L + ++++I PP RK+ V++GG++LA +
Sbjct: 347 MLDRYLDVVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGI 390
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +1
Query: 61 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 240
I E Y I++ ++ ++ T +G MYP D +K+ L K APP
Sbjct: 226 IRELIYRDILEYHPNMLREYLEGTESAG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 283
Query: 241 ERKYSVWIGGSILAS 285
ER+++ S+L S
Sbjct: 284 ERQHNSLPRPSVLYS 298
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 61 IHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP 240
I E Y I++ + ++ T +G MYP D +K+ L K APP
Sbjct: 321 IRELIYREILEYHPKMLREFLEGTESTG--FMYPSAVDHFKKQFAYLEEHYAKGSTAAPP 378
Query: 241 ERKYS 255
ER+++
Sbjct: 379 ERQHN 383
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 270 STDPYGVLPLWRSNDLNLHCRW-GESC 193
S DP G L W+ ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>07_03_0752 -
21241883-21242233,21242336-21242486,21242586-21242823,
21242917-21243127,21243214-21243344,21245046-21245931,
21246087-21246140,21246397-21246461,21246842-21246892,
21246960-21247029,21247493-21247597
Length = 770
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 401 RAAGGSDARCV*KHFLCTMEGPDS 330
RAAGG ARC+ LC E P S
Sbjct: 675 RAAGGEIARCIHVGLLCVQENPAS 698
>01_06_1741 +
39581656-39581680,39582627-39582697,39582779-39582898,
39583034-39583094,39583186-39583242,39583413-39583600,
39583747-39583818,39583953-39584180
Length = 273
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +2
Query: 248 STPYGSVDRSSPPSLPSNKCGSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCSIQAC 427
+TPY + P +N ++ +A P A KRTA + + +AG + + C
Sbjct: 214 ATPYPAKQAKKTPV--NNDMAKQSSGYVHVATPYPAKQAKKRTANNDMSEHSAGYACKPC 271
Query: 428 N 430
N
Sbjct: 272 N 272
>07_03_0008 +
12303536-12303893,12303910-12304176,12304635-12304951,
12304975-12305819,12305859-12306069
Length = 665
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = -2
Query: 401 RAAGGSDARCV*KHFLCTM----EGPDSSYSCFEIHICWK 294
RA G CV + FLCT+ +G + C E H+ WK
Sbjct: 301 RALGWDKFACVDEPFLCTLLKVGDGVNFRLFCKEYHLSWK 340
>05_04_0437 +
21234261-21234592,21234929-21234997,21235506-21235629,
21235740-21235745
Length = 176
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Frame = +2
Query: 260 GSVDRSSPPSLPSNKC----GSRNKSTTSLAPPLYTGSASKRTARRCLQQPAAGCS 415
G R PP PS+ G ++ + S A P+ S SKR RR ++ +GCS
Sbjct: 68 GEARRRIPPKAPSSDASLSDGGGSEGSDSGAAPIE--SPSKRPRRRLVEHGHSGCS 121
>03_05_1049 -
29956379-29956400,29957103-29957188,29957269-29957413,
29958518-29958813,29959242-29959253
Length = 186
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2
Query: 254 PYGSVDRSSPPSLPSNKCGS 313
P+ V SSPP+LP KCG+
Sbjct: 72 PFVGVPPSSPPALPPIKCGA 91
>02_05_0615 - 30364956-30365729,30365813-30366286
Length = 415
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 296 SNKC-GSRNKSTTSLAPPLYTGSASKRTARRCLQQ 397
+N C G +T + APP Y AS RTA R L++
Sbjct: 256 NNDCHGGDPNATAATAPPEYAVRASFRTALRALRE 290
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,156,704
Number of Sequences: 37544
Number of extensions: 396809
Number of successful extensions: 1192
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -