Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0259
         (663 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         252   1e-68
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         252   1e-68
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         252   1e-68
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          231   1e-62
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        27   0.70 

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  252 bits (616), Expect = 1e-68
 Identities = 117/118 (99%), Positives = 117/118 (99%)
 Frame = +1

Query: 13  PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
           P ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318

Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
           TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  252 bits (616), Expect = 1e-68
 Identities = 117/118 (99%), Positives = 117/118 (99%)
 Frame = +1

Query: 13  PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
           P ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318

Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
           TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  252 bits (616), Expect = 1e-68
 Identities = 117/118 (99%), Positives = 117/118 (99%)
 Frame = +1

Query: 13  PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
           P ALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318

Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
           TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  231 bits (565), Expect = 1e-62
 Identities = 106/118 (89%), Positives = 111/118 (94%)
 Frame = +1

Query: 13  PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
           P ALFQPSFLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEI 318

Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
           T+LAPST+KIKIIAPPERKYSVWIGGSILASLSTFQ MWISK EYDE GP IVHRKCF
Sbjct: 319 TSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.6 bits (56), Expect = 0.70
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 323 STTSLAPPLYTGSASKRTARRCLQQPAAGCSIQA 424
           S  +L   LY GSAS+    R LQQ  +G + QA
Sbjct: 70  SVKALLALLYEGSASRSETERELQQALSGGNSQA 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,215
Number of Sequences: 2352
Number of extensions: 14205
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)