Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0259
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 245 3e-65
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 245 3e-65
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 245 3e-65
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 245 3e-65
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 245 3e-65
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 245 3e-65
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 244 4e-65
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 244 4e-65
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 244 4e-65
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 238 3e-63
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 232 1e-61
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 130 9e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 109 2e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 101 5e-22
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 82 4e-16
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 66 3e-11
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 31 0.55
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 31 0.55
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 31 0.55
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.8
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.8
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.8
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 28 6.8
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 245 bits (599), Expect = 3e-65
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 245 bits (599), Expect = 3e-65
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 245 bits (599), Expect = 3e-65
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 245 bits (599), Expect = 3e-65
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 215 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 274
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 275 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 245 bits (599), Expect = 3e-65
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 245 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 304
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 305 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 245 bits (599), Expect = 3e-65
Identities = 113/118 (95%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P ALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 244 bits (597), Expect = 4e-65
Identities = 112/118 (94%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 244 bits (597), Expect = 4e-65
Identities = 112/118 (94%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 244 bits (597), Expect = 4e-65
Identities = 112/118 (94%), Positives = 116/118 (98%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 238 bits (582), Expect = 3e-63
Identities = 111/118 (94%), Positives = 115/118 (97%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P A+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQKEI
Sbjct: 259 PEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEI 318
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
TALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 319 TALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 232 bits (568), Expect = 1e-61
Identities = 107/118 (90%), Positives = 111/118 (94%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQKEI
Sbjct: 258 PEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEI 317
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 318 QHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 130 bits (314), Expect = 9e-31
Identities = 58/118 (49%), Positives = 81/118 (68%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+ E+
Sbjct: 257 PEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEM 316
Query: 193 TALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 366
+AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 317 RKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 109 bits (262), Expect = 2e-24
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Frame = +1
Query: 4 IPLPRALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 168
I LP LF +L E + + S D+DIR L++N ++GG ++ G
Sbjct: 308 IKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLILGF 367
Query: 169 ADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQMWISKQEYDESG 339
+R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQMW+SK EYDESG
Sbjct: 368 TERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQMWVSKAEYDESG 427
Query: 340 PSIVHRKC 363
SIV +KC
Sbjct: 428 KSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 101 bits (242), Expect = 5e-22
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 13/122 (10%)
Frame = +1
Query: 13 PRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 192
P LFQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+
Sbjct: 262 PEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKEL 321
Query: 193 TAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKQEYDE 333
L A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E
Sbjct: 322 KQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEE 381
Query: 334 SG 339
G
Sbjct: 382 GG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 86.6 bits (205), Expect = 1e-17
Identities = 35/101 (34%), Positives = 67/101 (66%)
Frame = +1
Query: 22 LFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 201
LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E++ +
Sbjct: 439 LFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTV 498
Query: 202 APSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 324
P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 499 VPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 81.8 bits (193), Expect = 4e-16
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Frame = +1
Query: 13 PRALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 189
P F P F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q++
Sbjct: 286 PEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRD 345
Query: 190 ITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 321
+ L+ P + +++I+ ++Y+VW GGS+LAS S F Q+ +K
Sbjct: 346 VKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKA 405
Query: 322 EYDESGPSI 348
EY E GPSI
Sbjct: 406 EYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Frame = +1
Query: 10 LPRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 189
+P LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E
Sbjct: 272 IPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLERE 331
Query: 190 ITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
+ ++ P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 332 VRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSN 387
Query: 361 CF*T 372
F T
Sbjct: 388 FFQT 391
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 65.7 bits (153), Expect = 3e-11
Identities = 34/124 (27%), Positives = 66/124 (53%), Gaps = 3/124 (2%)
Frame = +1
Query: 10 LPRALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 189
+P LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E
Sbjct: 272 IPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLERE 331
Query: 190 ITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 360
+ ++ P+ + + + P+ W G L L+ + WI+++++DE G S+
Sbjct: 332 VRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSLEFSN 387
Query: 361 CF*T 372
F T
Sbjct: 388 FFQT 391
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = +1
Query: 85 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 249
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 250 ----YSVWIGGSILASL-STFQQMWISKQEY 327
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 261 PYGVLPLWRSNDLNLHCRWGESCD 190
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 261 PYGVLPLWRSNDLNLHCRWGESCD 190
P VLPL NDL+ +WG+ CD
Sbjct: 97 PVAVLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 31.5 bits (68), Expect = 0.55
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 261 PYGVLPLWRSNDLNLHCRWGESCD 190
P VLPL NDL+ +WG+ CD
Sbjct: 282 PVAVLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 425 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 333
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 322 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 423
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 425 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 333
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.9 bits (59), Expect = 6.8
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 241 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 402
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,386,293
Number of Sequences: 27780
Number of extensions: 295836
Number of successful extensions: 909
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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