Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0257
(564 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 25 0.59
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 25 0.59
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 25 0.59
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 1.0
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 1.0
EF592536-1|ABQ95982.1| 598|Tribolium castaneum beta-N-acetylglu... 21 5.5
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 21 5.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 21 5.5
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 21 9.6
AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan oxyge... 21 9.6
AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.6
AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan oxyge... 21 9.6
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 24.6 bits (51), Expect = 0.59
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 232 CRIVC*KGGYSWPLRYRPGRISKIQA 309
CR+VC K G WP +P ++KI +
Sbjct: 61 CRLVCGKYGALWP---QPTSVTKISS 83
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.59
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 363 WNLVPVVVKLLYLASC 410
WNL+P+ V +L A+C
Sbjct: 922 WNLLPIAVFILVCATC 937
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 24.6 bits (51), Expect = 0.59
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 363 WNLVPVVVKLLYLASC 410
WNL+P+ V +L A+C
Sbjct: 922 WNLLPIAVFILVCATC 937
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.8 bits (49), Expect = 1.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 361 DETENTIASTTYSETSDKLVS*RFGLG 281
DET+N + TY+E +KL LG
Sbjct: 340 DETKNHYSKNTYNEQGNKLADLYKSLG 366
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.8 bits (49), Expect = 1.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -3
Query: 361 DETENTIASTTYSETSDKLVS*RFGLG 281
DET+N + TY+E +KL LG
Sbjct: 232 DETKNHYSKNTYNEQGNKLADLYKSLG 258
>EF592536-1|ABQ95982.1| 598|Tribolium castaneum
beta-N-acetylglucosaminidase NAG1 protein.
Length = 598
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 202 TEAIQHSRAICRIVC*KGGYSWP 270
TEA S CR+ C + WP
Sbjct: 43 TEATGLSLPACRLFCSEAAALWP 65
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 395 QQLHNH--GHQIP**NGEHHSKHDVQRDL 315
Q ++NH GH + + +HH H Q+ +
Sbjct: 160 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 188
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.4 bits (43), Expect = 5.5
Identities = 9/29 (31%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -2
Query: 395 QQLHNH--GHQIP**NGEHHSKHDVQRDL 315
Q ++NH GH + + +HH H Q+ +
Sbjct: 162 QSMNNHHMGHHMQEQHPQHHQPHHQQQHM 190
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 20.6 bits (41), Expect = 9.6
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 185 HGFCVLSLRAHSVSWW 138
+G+ VL LRA++ +W
Sbjct: 652 NGYVVLRLRANNPGFW 667
>AY052394-1|AAL15468.1| 228|Tribolium castaneum tryptophan
oxygenase protein.
Length = 228
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFL 58
+KR+ V + +FK E++E L
Sbjct: 79 EKRREVYESIFKVEVHEAL 97
>AY052392-1|AAL15466.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFL 58
+KR+ V + +FK E++E L
Sbjct: 239 EKRREVYESIFKVEVHEAL 257
>AY052390-1|AAL15464.1| 388|Tribolium castaneum tryptophan
oxygenase protein.
Length = 388
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFL 58
+KR+ V + +FK E++E L
Sbjct: 239 EKRREVYESIFKVEVHEAL 257
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,352
Number of Sequences: 336
Number of extensions: 2984
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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