Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0257
(564 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3 prot... 353 2e-97
U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3 prot... 353 2e-97
U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3 prot... 353 2e-97
BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3 pr... 353 2e-97
BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3 pr... 353 2e-97
BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3 pr... 353 2e-97
BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for IM... 353 2e-97
BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for IM... 353 2e-97
BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3 pr... 353 2e-97
AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3 pr... 353 2e-97
AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3 pr... 353 2e-97
S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein prot... 352 6e-97
AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3 va... 351 8e-97
X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRN... 351 1e-96
BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for IM... 225 6e-59
AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3 pr... 214 2e-55
BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein. 204 1e-52
L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3 prot... 163 5e-40
AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protei... 132 6e-31
EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein. 29 8.5
BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein. 29 8.5
BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26 pro... 29 8.5
BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein. 29 8.5
AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated p... 29 8.5
AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26 ... 29 8.5
AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic pre... 29 8.5
AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens ... 29 8.5
AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens ... 29 8.5
AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26 var... 29 8.5
>U14992-1|AAB60338.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>U14991-1|AAB60337.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>U14990-1|AAB60336.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>BC100284-1|AAI00285.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>BC071917-1|AAH71917.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>BC034149-1|AAH34149.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>BC013196-1|AAH13196.1| 242|Homo sapiens Unknown (protein for
IMAGE:4347401) protein.
Length = 242
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 6 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 65
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 66 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 125
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 126 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 185
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 186 KIMLPWD 192
>BC003577-1|AAH03577.1| 242|Homo sapiens Unknown (protein for
IMAGE:3544292) protein.
Length = 242
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 6 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 65
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 66 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 125
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 126 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 185
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 186 KIMLPWD 192
>BC003137-1|AAH03137.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>AY791291-1|AAV40835.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>AB061838-1|BAB79476.1| 243|Homo sapiens ribosomal protein S3
protein.
Length = 243
Score = 353 bits (868), Expect = 2e-97
Identities = 171/187 (91%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>S42658-1|AAB19349.2| 243|Homo sapiens S3 ribosomal protein
protein.
Length = 243
Score = 352 bits (865), Expect = 6e-97
Identities = 170/187 (90%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
K+RKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>AK223048-1|BAD96768.1| 243|Homo sapiens ribosomal protein S3
variant protein.
Length = 243
Score = 351 bits (864), Expect = 8e-97
Identities = 170/187 (90%), Positives = 179/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAE+VATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>X55715-1|CAA39248.1| 243|Homo sapiens protein ( Human Hums3 mRNA
for 40S ribosomal protein s3. ).
Length = 243
Score = 351 bits (863), Expect = 1e-96
Identities = 170/187 (90%), Positives = 178/187 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 361
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAE LRYKL+GGLAVRRACYGVLRFI
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFI 126
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 127 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 186
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 187 KIMLPWD 193
>BC150501-1|AAI50502.1| 133|Homo sapiens Unknown (protein for
IMAGE:40134452) protein.
Length = 133
Score = 225 bits (551), Expect = 6e-59
Identities = 110/127 (86%), Positives = 116/127 (91%)
Frame = +2
Query: 167 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYG 346
+GRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYG
Sbjct: 6 QGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 65
Query: 347 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGV 526
VLRFIMESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGV
Sbjct: 66 VLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
Query: 527 LGIKVKI 547
V +
Sbjct: 126 WDTSVHL 132
>AF281313-1|AAF82383.1| 158|Homo sapiens ribosomal protein S3
protein.
Length = 158
Score = 214 bits (522), Expect = 2e-55
Identities = 102/108 (94%), Positives = 105/108 (97%)
Frame = +2
Query: 239 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 418
LYAEKVATRGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEVVVSGKLRGQ
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQ 60
Query: 419 RAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWD 562
RAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKVKIMLPWD
Sbjct: 61 RAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWD 108
>BC071669-1|AAH71669.1| 117|Homo sapiens RPS3 protein protein.
Length = 117
Score = 204 bits (499), Expect = 1e-52
Identities = 100/111 (90%), Positives = 106/111 (95%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRR 334
RELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>L16016-1|AAA18095.1| 95|Homo sapiens ribosomal protein S3
protein.
Length = 95
Score = 163 bits (395), Expect = 5e-40
Identities = 79/89 (88%), Positives = 84/89 (94%)
Frame = +2
Query: 2 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 181
KKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VLGEKGRRI
Sbjct: 7 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 66
Query: 182 RELTSVVQKRFNIPEQSVELYAEKVATRG 268
RELT+VVQKRF PE SVELYAEKVATRG
Sbjct: 67 RELTAVVQKRFGFPEGSVELYAEKVATRG 95
>AB062288-1|BAB93471.1| 117|Homo sapiens IMR-90 ribosomal protein
S3 protein.
Length = 117
Score = 132 bits (320), Expect = 6e-31
Identities = 62/67 (92%), Positives = 64/67 (95%)
Frame = +2
Query: 362 MESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKV 541
MESGA+GCEVVVSGKLRGQRAKSMKFVDGLMIHSGDP N YV+TA RHVLLRQGVLGIKV
Sbjct: 1 MESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKV 60
Query: 542 KIMLPWD 562
KIMLPWD
Sbjct: 61 KIMLPWD 67
>EF011612-1|ABK41102.1| 514|Homo sapiens CDW2/WDR26 protein.
Length = 514
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC063817-1|AAH63817.1| 404|Homo sapiens WDR26 protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 295 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 336
>BC052301-1|AAH52301.2| 514|Homo sapiens WD repeat domain 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>BC031471-1|AAH31471.2| 373|Homo sapiens WDR26 protein protein.
Length = 373
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 264 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 305
>AY596776-1|AAT02353.1| 127|Homo sapiens HCV p7-transactivated
protein 1 protein.
Length = 127
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +1
Query: 307 AYRRSRCTSCLLW--CSPFHHGIWCP 378
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AY304473-1|AAQ74770.1| 514|Homo sapiens WD40 repeat protein 26
protein.
Length = 514
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 405 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 446
>AY221751-1|AAO67709.1| 498|Homo sapiens myocardial ischemic
preconditioning upregulated protein 2 protein.
Length = 498
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 389 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 430
>AK127159-1|BAC86861.1| 177|Homo sapiens protein ( Homo sapiens
cDNA FLJ45222 fis, clone BRCAN2019953. ).
Length = 177
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 161
GSWPR + P + S PS ++L LW R+ S
Sbjct: 83 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 116
>AK126967-1|BAC86768.1| 206|Homo sapiens protein ( Homo sapiens
cDNA FLJ45020 fis, clone BRAWH3016123. ).
Length = 206
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 GSWPRTATPAWKCGSLPSARRSL-LWPPGHRVCS 161
GSWPR + P + S PS ++L LW R+ S
Sbjct: 112 GSWPRVSPPGTQACSRPSGMQALGLWGAAWRLAS 145
>AK124507-1|BAC85868.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ42516 fis, clone BRACE2047385. ).
Length = 127
Score = 29.5 bits (63), Expect = 8.5
Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Frame = +1
Query: 307 AYRRSRCTSCLLW--CSPFHHGIWCP 378
A RR RC +C LW C WCP
Sbjct: 88 AARRCRCGACALWTPCGSARSAPWCP 113
>AK024669-1|BAB14955.1| 367|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21016 fis, clone CAE05735. ).
Length = 367
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 258 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 299
>AB209887-1|BAD93124.1| 725|Homo sapiens WD repeat domain 26
variant protein.
Length = 725
Score = 29.5 bits (63), Expect = 8.5
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 226 LWNVESLLYYGSELTDSASFLSEHTLCPGGHNNDLRADGSDPH 98
LW+++ + + F + H+ C GGHN D A GS+ H
Sbjct: 616 LWDLQDRVLVRKYQGVTQGFYTIHS-CFGGHNEDFIASGSEDH 657
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,490,837
Number of Sequences: 237096
Number of extensions: 1929936
Number of successful extensions: 8158
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 7982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8158
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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