Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0255
         (795 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx mori|...    48   2e-04
UniRef50_A7D5C6 Cluster: Glucan 1,4-alpha-glucosidase; n=1; Halo...    33   8.3  

>UniRef50_A0MNZ0 Cluster: NADPH oxidoreductase; n=1; Bombyx
           mori|Rep: NADPH oxidoreductase - Bombyx mori (Silk moth)
          Length = 191

 Score = 48.4 bits (110), Expect = 2e-04
 Identities = 21/26 (80%), Positives = 21/26 (80%)
 Frame = -3

Query: 460 CTCFFLSLRWVDELTADLVLSGYWSP 383
           C   FL LRWVDELTA LVLSGYWSP
Sbjct: 150 CLSRFLLLRWVDELTAHLVLSGYWSP 175


>UniRef50_A7D5C6 Cluster: Glucan 1,4-alpha-glucosidase; n=1;
            Halorubrum lacusprofundi ATCC 49239|Rep: Glucan
            1,4-alpha-glucosidase - Halorubrum lacusprofundi ATCC
            49239
          Length = 1592

 Score = 33.1 bits (72), Expect = 8.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -1

Query: 435  DGWTSSQPTWC*VATGAHRHLQTHY 361
            D WT+    WC  ATG  RH +T Y
Sbjct: 1251 DDWTTRVEEWCATATGTERHAETPY 1275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 819,116,746
Number of Sequences: 1657284
Number of extensions: 17058555
Number of successful extensions: 33408
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 32277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33400
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)