Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0255
         (795 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g34540.1 68417.m04908 isoflavone reductase family protein sim...    30   2.0  
At3g10410.1 68416.m01248 serine carboxypeptidase III, putative s...    28   8.2  

>At4g34540.1 68417.m04908 isoflavone reductase family protein
           similar to phenylcoumaran benzylic ether reductase
           homolog Fi1 [Forsythia x intermedia][GI:7578895];
           contains isoflavone reductase domain PF02716
          Length = 306

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +1

Query: 211 RQIPYP*SIGVVFIFNLVIKGQKFYF 288
           ++ PYP ++ +VFI+++ IKG   YF
Sbjct: 251 KETPYPDNMEMVFIYSVFIKGDHTYF 276


>At3g10410.1 68416.m01248 serine carboxypeptidase III, putative
           similar to serine carboxypeptidase III from Oryza sativa
           SP|P37891, Matricaria chamomilla GI:6960455, Hordeum
           vulgare SP|P21529, Triticum aestivum SP|P11515; contains
           Pfam profile PF0450 serine carboxypeptidase
          Length = 516

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 16/74 (21%)
 Frame = -1

Query: 282 KLLTFYDKVKYEYYSNTSWVWNLSIWKHIF*LYY----------YCLDKVE------GIS 151
           +L  FY+   ++  SN S  WN   W  +  L Y          Y  DK +      G+S
Sbjct: 142 ELAVFYENGPFKITSNMSLAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDIRHDETGVS 201

Query: 150 TTLHGCVQAYFSEN 109
             L+  +QA+F+E+
Sbjct: 202 NDLYDFLQAFFAEH 215


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,834,038
Number of Sequences: 28952
Number of extensions: 377196
Number of successful extensions: 658
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1794809600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)