Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0254
         (737 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7VIC5 Cluster: Cation-transporting ATPase; n=1; Helico...    34   3.2  
UniRef50_Q2THV7 Cluster: Membrane-associated DHHC8 zinc finger p...    34   4.2  
UniRef50_Q9XSA0 Cluster: Pulmonary surfactant-associated protein...    33   9.7  
UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep: CG...    33   9.7  
UniRef50_Q2KFN1 Cluster: Putative uncharacterized protein; n=2; ...    33   9.7  

>UniRef50_Q7VIC5 Cluster: Cation-transporting ATPase; n=1;
           Helicobacter hepaticus|Rep: Cation-transporting ATPase -
           Helicobacter hepaticus
          Length = 747

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 25/62 (40%), Positives = 35/62 (56%)
 Frame = +2

Query: 323 LSTKVKMLILRILPI*KFIGAVNSWSEAVCSISTIQTLNFTNVLVLSTFWYVFH*SAIFH 502
           LST+ K+++  I  I   I  V SWSE    IS   TL++T +LVLS    V H   +F+
Sbjct: 99  LSTQTKLIVSIIATI---IVVVLSWSEMFIGISLPYTLHYTLLLVLSL--AVMHMGRMFY 153

Query: 503 LQ 508
           L+
Sbjct: 154 LR 155


>UniRef50_Q2THV7 Cluster: Membrane-associated DHHC8 zinc finger
           protein; n=2; Euteleostomi|Rep: Membrane-associated
           DHHC8 zinc finger protein - Fugu rubripes (Japanese
           pufferfish) (Takifugu rubripes)
          Length = 797

 Score = 33.9 bits (74), Expect = 4.2
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 21  HLPAVHPADQRTRLWQPSPSPSVLSYPNSTISYTSLILLDVSEAT 155
           HLPA+ P    +  ++   SP+ LS  N ++SY SL+   +S AT
Sbjct: 477 HLPALQPPTVTSTPYKSVFSPNTLSNRNGSLSYDSLLHPSISSAT 521


>UniRef50_Q9XSA0 Cluster: Pulmonary surfactant-associated protein B;
           n=1; Ovis aries|Rep: Pulmonary surfactant-associated
           protein B - Ovis aries (Sheep)
          Length = 158

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
 Frame = +1

Query: 292 HW*NLRSGISPEHESENVNIKNFAHMKI---HWSC*FMVRGSM-----LH*YDSNLEFYK 447
           HW  L    SP HESENV +K+ +H+++    W+  +    SM     L    S+L F  
Sbjct: 39  HWSGLPFP-SPMHESENVKVKSLSHVRLPATPWTAAYQAPASMGFSSLLSSLLSSLAFSA 97

Query: 448 CSGP-IYILVCFPLK 489
            S P +++  C P++
Sbjct: 98  VSEPEVHLSACGPMQ 112


>UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep:
             CG33196-PB - Drosophila melanogaster (Fruit fly)
          Length = 23015

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 11    KPTSPARGAPCRPTNEALATFPFPFCSLLPKF 106
             +P +P + +PC P +E   +   P CS LP+F
Sbjct: 14001 RPQNPCQPSPCGPNSECRVSGDSPSCSCLPEF 14032


>UniRef50_Q2KFN1 Cluster: Putative uncharacterized protein; n=2;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea 70-15
          Length = 536

 Score = 32.7 bits (71), Expect = 9.7
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +2

Query: 260 HNHQIMTVYAHIGKI*GPGSVLSTKVKMLILRILPI*KFIGAVNSWSEAVCSISTIQ 430
           H+H++ +V    GK+ G G   + KV +++       K I +  SW EA  S+ T Q
Sbjct: 92  HDHRMQSVSRSWGKLVGKGPGDNAKVSLMLNDFEDADKLIDSAKSWREAWISLVTSQ 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,170,913
Number of Sequences: 1657284
Number of extensions: 13752981
Number of successful extensions: 32125
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 30842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32093
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60088620670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)