Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0248
(687 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal ... 194 2e-48
UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126; Euka... 158 1e-37
UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius... 145 8e-34
UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037... 140 2e-32
UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular o... 136 5e-31
UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|R... 128 1e-28
UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117... 127 2e-28
UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10; Fungi/... 127 3e-28
UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus... 124 3e-27
UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6; Fungi/M... 118 1e-25
UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S riboso... 114 2e-24
UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metaz... 109 8e-23
UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostel... 109 8e-23
UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2; Crypto... 107 3e-22
UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n... 96 6e-19
UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S riboso... 93 4e-18
UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n... 93 6e-18
UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10; Trypa... 91 2e-17
UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n... 89 7e-17
UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=... 89 9e-17
UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lambl... 87 5e-16
UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;... 76 9e-13
UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, wh... 73 7e-12
UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000... 62 9e-09
UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S riboso... 62 9e-09
UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast ... 62 9e-09
UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5; T... 62 1e-08
UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;... 61 2e-08
UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1; Guilla... 59 1e-07
UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27; Archa... 58 3e-07
UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2; Methan... 54 3e-06
UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11; Bacter... 50 5e-05
UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 50 7e-05
UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58; Proteo... 48 2e-04
UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23; ... 48 3e-04
UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8; Gammapr... 47 4e-04
UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000... 47 5e-04
UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59; Gammap... 46 7e-04
UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1; Lentisp... 46 9e-04
UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14; Clostr... 46 9e-04
UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2; Methan... 46 0.001
UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1; Psychro... 44 0.003
UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36; Bacter... 44 0.003
UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1; Methan... 44 0.003
UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7; Bacilli... 44 0.003
UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10; Bacter... 44 0.003
UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23; ... 44 0.003
UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candida... 44 0.005
UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23; ... 44 0.005
UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1; Bactero... 43 0.006
UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2; environ... 43 0.006
UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12; Proteo... 43 0.006
UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27; Gammap... 43 0.006
UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal prote... 43 0.008
UniRef50_A5TVD5 Cluster: 50S ribosomal protein L23; n=3; Fusobac... 43 0.008
UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4; Haloba... 43 0.008
UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borreli... 43 0.008
UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3; Bacteri... 42 0.011
UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14; Bacter... 42 0.011
UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7; Bacteri... 42 0.014
UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26; Firmic... 42 0.019
UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2; Euryar... 42 0.019
UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2; Wolbach... 41 0.025
UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candida... 40 0.043
UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellula... 40 0.043
UniRef50_Q6AP69 Cluster: 50S ribosomal protein L23; n=2; Deltapr... 40 0.043
UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7; Bactero... 40 0.057
UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellul... 40 0.057
UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4; Methan... 40 0.057
UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;... 40 0.075
UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2; ... 40 0.075
UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55; Alphap... 39 0.13
UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 39 0.13
UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2; Flavoba... 38 0.17
UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candida... 38 0.17
UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 38 0.17
UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8; Francis... 38 0.17
UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orienti... 38 0.23
UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candida... 38 0.30
UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16; Actino... 37 0.40
UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11; Bacter... 37 0.40
UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1; Maripro... 37 0.40
UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 37 0.53
UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila melanogaster|... 37 0.53
UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2; Thermo... 36 0.70
UniRef50_Q8EUB5 Cluster: 50S ribosomal protein L23; n=1; Mycopla... 36 0.93
UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candida... 35 1.6
UniRef50_Q81VS8 Cluster: 50S ribosomal protein L23; n=56; Firmic... 35 2.1
UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23; ... 35 2.1
UniRef50_UPI0001555FAF Cluster: PREDICTED: similar to ribosomal ... 34 2.8
UniRef50_Q9PQQ8 Cluster: 50S ribosomal protein L23; n=1; Ureapla... 34 2.8
UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1; ... 34 3.7
UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of str... 34 3.7
UniRef50_Q08ZJ6 Cluster: 50S ribosomal protein L23; n=1; Stigmat... 33 4.9
UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces cere... 33 6.5
UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycopla... 33 6.5
UniRef50_P10140 Cluster: 50S ribosomal protein L23; n=4; Mollicu... 33 6.5
UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23; ... 33 6.5
>UniRef50_UPI00015B567B Cluster: PREDICTED: similar to ribosomal
protein L23Ae; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to ribosomal protein L23Ae - Nasonia vitripennis
Length = 247
Score = 194 bits (473), Expect = 2e-48
Identities = 89/111 (80%), Positives = 100/111 (90%)
Frame = +1
Query: 334 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 513
PV KALKAQ+K++KG G RVRKIR SVHF RPKTF PPR+PKYPRKS+P RNRMDA NI
Sbjct: 108 PVQKALKAQKKILKGVQGSRVRKIRTSVHFHRPKTFRPPRNPKYPRKSVPNRNRMDAVNI 167
Query: 514 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
IKFPLT+EAAMKKIEDNNTLVFIVHT ANK+HIK++VKKLYD++V KVNTL
Sbjct: 168 IKFPLTTEAAMKKIEDNNTLVFIVHTRANKYHIKSSVKKLYDVDVLKVNTL 218
>UniRef50_P62750 Cluster: 60S ribosomal protein L23a; n=126;
Eukaryota|Rep: 60S ribosomal protein L23a - Homo sapiens
(Human)
Length = 156
Score = 158 bits (383), Expect = 1e-37
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTL
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTL 127
>UniRef50_A7KCY9 Cluster: Ribosomal protein L23a; n=1; Heliconius
melpomene|Rep: Ribosomal protein L23a - Heliconius
melpomene
Length = 221
Score = 145 bits (352), Expect = 8e-34
Identities = 70/93 (75%), Positives = 74/93 (79%)
Frame = +1
Query: 268 SKLKIAXXXXXXXXXXXXXXXXPVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEP 447
+KLKIA PV KALK Q+KVVKGEHGKRVRKIR SVHFRRPKTFEP
Sbjct: 129 AKLKIAPKPKKTGIKGQKKVVKPVVKALKIQKKVVKGEHGKRVRKIRTSVHFRRPKTFEP 188
Query: 448 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAM 546
PR+PKYPRKSLPKRNRMDAYNIIK+PLTSEAAM
Sbjct: 189 PRNPKYPRKSLPKRNRMDAYNIIKYPLTSEAAM 221
>UniRef50_A6NCG1 Cluster: Uncharacterized protein ENSP00000339037;
n=99; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000339037 - Homo sapiens (Human)
Length = 156
Score = 140 bits (340), Expect = 2e-32
Identities = 67/108 (62%), Positives = 82/108 (75%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KI S FRRPKT + R PKYP KS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHNHKKKKIHTSPTFRRPKTLQLRRQPKYPWKSTPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKK DNNT VF+V ANKH IK AVK+LYDI++ KVNTL
Sbjct: 80 PLTTESAMKKTGDNNTRVFMVDVKANKHQIKQAVKRLYDIDMIKVNTL 127
>UniRef50_A3F4R7 Cluster: Ribosomal protein L23a; n=5; cellular
organisms|Rep: Ribosomal protein L23a - Taenia asiatica
(Asian tapeworm)
Length = 204
Score = 136 bits (329), Expect = 5e-31
Identities = 64/111 (57%), Positives = 85/111 (76%)
Frame = +1
Query: 337 VTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 516
V +ALKAQ+ + G H K +K+ ++ FRRPKT+ PPR PK R +PKRN++DA+ II
Sbjct: 66 VARALKAQKAINIGAHTKGKKKVMKNIRFRRPKTYRPPRCPKDRRFEIPKRNKLDAFRII 125
Query: 517 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
+ P+T+EAAMKKIEDN+TLVF+V ANK IKAAV+++Y I VAKVNTL+
Sbjct: 126 RHPVTTEAAMKKIEDNDTLVFVVDRRANKPAIKAAVQEMYKIKVAKVNTLN 176
>UniRef50_Q9LWB2 Cluster: Ribosomal protein L23; n=5; Eukaryota|Rep:
Ribosomal protein L23 - Spinacia oleracea (Spinach)
Length = 155
Score = 128 bits (309), Expect = 1e-28
Identities = 66/114 (57%), Positives = 80/114 (70%), Gaps = 3/114 (2%)
Frame = +1
Query: 334 PVTKALKAQRKVVKGEH---GKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDA 504
P +ALKA + V G + K +KIR V F RPKTF+ R+PKYPR S RN++D
Sbjct: 13 PKAQALKAAKAVKSGSNILKKKASKKIRTKVTFHRPKTFKKERNPKYPRISATPRNKLDH 72
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
Y I+K+PLT+E+AMKKIEDNNTLVFIV A+K IK AVKK+YDI KVNTL
Sbjct: 73 YQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQSKKVNTL 126
>UniRef50_A6NN95 Cluster: Uncharacterized protein ENSP00000332117;
n=5; Eutheria|Rep: Uncharacterized protein
ENSP00000332117 - Homo sapiens (Human)
Length = 156
Score = 127 bits (307), Expect = 2e-28
Identities = 60/108 (55%), Positives = 79/108 (73%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+A+K+ E+NNTL+F V ANKH IK AVKKLYD +VA+V TL
Sbjct: 80 PLTTESAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYDGDVAEVTTL 127
>UniRef50_P04456 Cluster: 60S ribosomal protein L25; n=10;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 142
Score = 127 bits (306), Expect = 3e-28
Identities = 60/111 (54%), Positives = 79/111 (71%)
Frame = +1
Query: 334 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 513
P KA A++ VVKG +GK+ K+R S FR PKT + R PKY K++P NR+D+Y +
Sbjct: 3 PSAKATAAKKAVVKGTNGKKALKVRTSATFRLPKTLKLARAPKYASKAVPHYNRLDSYKV 62
Query: 514 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
I+ P+TSE AMKK+ED N LVF V ANK+ IK AVK+LY+++V KVNTL
Sbjct: 63 IEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTL 113
>UniRef50_Q4GXF0 Cluster: Ribosomal protein L23Ae; n=1; Dascillus
cervinus|Rep: Ribosomal protein L23Ae - Dascillus
cervinus
Length = 212
Score = 124 bits (298), Expect = 3e-27
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = +1
Query: 334 PVTKALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNI 513
PV KAL Q+KV+KG G R RKIRNSVHF RPKTF PPR+PKYPRKS+P R+RMDAYNI
Sbjct: 141 PVQKALNVQKKVIKGPFGTRARKIRNSVHFHRPKTFRPPRNPKYPRKSVPTRSRMDAYNI 200
Query: 514 IKFPLTSEAAMK 549
IK+PLT+EAAMK
Sbjct: 201 IKYPLTTEAAMK 212
>UniRef50_Q2H685 Cluster: 60S ribosomal protein L25; n=6;
Fungi/Metazoa group|Rep: 60S ribosomal protein L25 -
Chaetomium globosum (Soil fungus)
Length = 156
Score = 118 bits (284), Expect = 1e-25
Identities = 58/108 (53%), Positives = 72/108 (66%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
+A KA + +KG H + K+R S F RPKT R PKYPRKS+P R+D + II
Sbjct: 19 QAKKAAQAALKGVHAHKRTKVRLSTTFHRPKTLVLSRAPKYPRKSVPHEPRLDEHKIIVH 78
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PL +E A+KKIE+ NTLVFIV ANK IK A+KKLYDI+ K+NTL
Sbjct: 79 PLNTEGALKKIEEQNTLVFIVDVKANKAQIKQALKKLYDIDTVKINTL 126
>UniRef50_UPI00005A1B15 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 169
Score = 114 bits (275), Expect = 2e-24
Identities = 57/79 (72%), Positives = 63/79 (79%)
Frame = +1
Query: 430 PKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHH 609
PKT R PK PRKS P+RN++D Y IIKFPLT+E+AMKKIED NTLVFIV ANKH
Sbjct: 3 PKTLHLRRQPKCPRKSAPRRNKLDHYAIIKFPLTTESAMKKIED-NTLVFIVDVKANKHQ 61
Query: 610 IKAAVKKLYDINVAKVNTL 666
IK AVKKLYDI+VAKVN L
Sbjct: 62 IKQAVKKLYDIDVAKVNAL 80
>UniRef50_Q9DFF6 Cluster: 60S ribosomal protein; n=8; Fungi/Metazoa
group|Rep: 60S ribosomal protein - Oncorhynchus mykiss
(Rainbow trout) (Salmo gairdneri)
Length = 96
Score = 109 bits (261), Expect = 8e-23
Identities = 52/67 (77%), Positives = 58/67 (86%)
Frame = +1
Query: 466 PRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN 645
PRKS +RN++D Y IIKFPLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+
Sbjct: 1 PRKSASRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKHAVKKLYDID 60
Query: 646 VAKVNTL 666
VAKVNTL
Sbjct: 61 VAKVNTL 67
>UniRef50_Q54BQ3 Cluster: Ribosomal protein L23a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L23a -
Dictyostelium discoideum AX4
Length = 169
Score = 109 bits (261), Expect = 8e-23
Identities = 53/108 (49%), Positives = 70/108 (64%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KA A V KG K RK+R SV FRRP T P+ P YPR+S+ K +MD + I+K
Sbjct: 33 KAKAAASAVKKGVSNKSTRKVRTSVIFRRPVTLNNPKKPAYPRRSVNKITKMDQFRILKA 92
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+A +KIE +NT+ F+V ANK + AV K+YD+ V +VNTL
Sbjct: 93 PLTTESATQKIEGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTL 140
>UniRef50_Q5CPV5 Cluster: 60S ribosomal protein L23A; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L23A -
Cryptosporidium parvum Iowa II
Length = 156
Score = 107 bits (257), Expect = 3e-22
Identities = 55/111 (49%), Positives = 72/111 (64%), Gaps = 1/111 (0%)
Frame = +1
Query: 340 TKA-LKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 516
TKA K + VK KIR V F RPKT + R+PKY RKS+ + +D Y+II
Sbjct: 18 TKANAKKTAQAVKNSKRSSTTKIRTRVQFYRPKTLKLQRNPKYERKSIKTQKSLDCYDII 77
Query: 517 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
K P+T+E+AMK +E NT+VF+V+ ANK IK AV KLYD+ VA VNT++
Sbjct: 78 KRPITTESAMKMVETLNTIVFLVNERANKTQIKYAVNKLYDVKVANVNTVN 128
>UniRef50_A5K303 Cluster: 60S ribosomal protein L23a, putative; n=3;
Plasmodium|Rep: 60S ribosomal protein L23a, putative -
Plasmodium vivax
Length = 195
Score = 96.3 bits (229), Expect = 6e-19
Identities = 51/107 (47%), Positives = 70/107 (65%), Gaps = 2/107 (1%)
Frame = +1
Query: 358 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLT 531
Q K E K+ +KI S+ F+RPKT + P++PK P+ KS K+ +D Y I+K+PLT
Sbjct: 63 QVKKAAAEESKKKKKITTSIKFKRPKTLKLPKNPKCPKVIKSCYKKT-LDKYGILKYPLT 121
Query: 532 SEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
SE AMKKIE+ NTLVFI A+K I +VK L+ I+ KVN L++
Sbjct: 122 SEKAMKKIEEINTLVFICDKRADKKKITKSVKNLFGISCEKVNVLNR 168
>UniRef50_UPI00005A4969 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 60S ribosomal protein L23a - Canis
familiaris
Length = 175
Score = 93.5 bits (222), Expect = 4e-18
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +1
Query: 451 RHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKK 630
R PKYPRKS P+RN+ D I+KF LT+++AMK IEDNNT VFIV ANKH I+ A +
Sbjct: 48 REPKYPRKSTPRRNKHDHDAIVKFSLTTKSAMKNIEDNNTFVFIVDAKANKHQIEQAGET 107
Query: 631 LYDINVAKVNTL 666
LYDI+ A V TL
Sbjct: 108 LYDIDTANVTTL 119
>UniRef50_Q4XUC9 Cluster: 60S ribosomal protein L23a, putative; n=2;
Plasmodium chabaudi|Rep: 60S ribosomal protein L23a,
putative - Plasmodium chabaudi
Length = 147
Score = 93.1 bits (221), Expect = 6e-18
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 2/96 (2%)
Frame = +1
Query: 391 RVRKIRNSVHFRRPKTFEPPRHPKYPR--KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN 564
+++KI S+ F+RP+T ++PK P+ KS + +D Y IIK+PLTSE AMKKIE+
Sbjct: 26 KMQKITTSIRFKRPRTLRLKKNPKCPKILKSCHTKT-LDKYGIIKYPLTSEKAMKKIEEI 84
Query: 565 NTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
NTLVFI A+K IK +VK L+DI AKVN L++
Sbjct: 85 NTLVFICDKRADKRKIKKSVKSLFDIKCAKVNVLNR 120
>UniRef50_P41165 Cluster: 60S ribosomal protein L23a; n=10;
Trypanosomatidae|Rep: 60S ribosomal protein L23a -
Trypanosoma brucei brucei
Length = 164
Score = 91.1 bits (216), Expect = 2e-17
Identities = 44/90 (48%), Positives = 57/90 (63%)
Frame = +1
Query: 397 RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLV 576
RK FRRP T+ P K +N+ DA+ II++PLT++ AMKKIE+NNTL
Sbjct: 46 RKAYTRPQFRRPHTYRRPATVKPSSNVSAIKNKWDAFRIIRYPLTTDKAMKKIEENNTLT 105
Query: 577 FIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
FIV + ANK IK A++KLY + KVNTL
Sbjct: 106 FIVDSRANKTEIKKAIRKLYQVKTVKVNTL 135
>UniRef50_Q4MZ08 Cluster: 60S ribosomal protein L23a, putative; n=2;
Theileria|Rep: 60S ribosomal protein L23a, putative -
Theileria parva
Length = 152
Score = 89.4 bits (212), Expect = 7e-17
Identities = 49/109 (44%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 519
KA A R V K K+V+ RN+ HF R +T R PKY +K ++D ++I++
Sbjct: 16 KAKLASRSVKKSTSVKKVKTRRNT-HFFRGRTLSLKRTPKYEKKVKTAYTKKLDKFSIVR 74
Query: 520 FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
+PLT+E+AMK IE+ NTLVF+V ANK + AV +LYDI VNTL
Sbjct: 75 YPLTTESAMKMIEELNTLVFVVDPRANKAKVAKAVSQLYDITPVHVNTL 123
>UniRef50_A7AME1 Cluster: 60S ribosomal protein L23, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L23, putative -
Babesia bovis
Length = 154
Score = 89.0 bits (211), Expect = 9e-17
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNR-MDAYNIIK 519
K K VK + KIR + HF R +T P+ PK R + ++ +D ++IIK
Sbjct: 17 KQAKIAANSVKKSTTAKGYKIRRNTHFFRGRTLTLPKSPKVKRHLITAHSKKLDKFSIIK 76
Query: 520 FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
+PLT+E +MK IE+ NTLVFIV + ANK I AV +LYD+ +VNTL++
Sbjct: 77 YPLTTEKSMKMIEEINTLVFIVDSRANKEKIAKAVSELYDVKCVRVNTLNR 127
>UniRef50_Q7QSE5 Cluster: GLP_426_12155_12580; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_12155_12580 - Giardia lamblia
ATCC 50803
Length = 141
Score = 86.6 bits (205), Expect = 5e-16
Identities = 45/110 (40%), Positives = 71/110 (64%), Gaps = 2/110 (1%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRV--RKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNII 516
+ALKAQ+ ++ HG RV +KIR +VHF RPKT + P YPR + K + D +++
Sbjct: 6 QALKAQKAIL---HGTRVEAKKIRTNVHFFRPKTLVHKKAPLYPRNPIKKGSWDDPCDLL 62
Query: 517 KFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
++P+ ++ +IE NNT+VFIV A+K I+ A + +++ VA+VNTL
Sbjct: 63 RYPIKTDENTTQIEKNNTIVFIVDRRASKPEIRKAFETVFETKVARVNTL 112
>UniRef50_Q012N9 Cluster: RL23A_FRIAG 60S ribosomal protein L23A;
n=2; Ostreococcus|Rep: RL23A_FRIAG 60S ribosomal protein
L23A - Ostreococcus tauri
Length = 259
Score = 75.8 bits (178), Expect = 9e-13
Identities = 57/151 (37%), Positives = 76/151 (50%), Gaps = 41/151 (27%)
Frame = +1
Query: 337 VTKALKAQRKVVKGEHGKRVRK-IRNSVHFR----------------RPKTFEPPRHPKY 465
V KA KA + V KG GK ++K + H R RP+T + R P Y
Sbjct: 80 VNKASKAAKFVKKGAKGKLLKKRFSATFHSRETDHRERLTSDVLTVYRPRTLKHERKPAY 139
Query: 466 PRKSLPKRNRMDAYN------------------------IIKFPLTSEAAMKKIEDNNTL 573
PR S+P + ++D ++ I+K PL +E A+ K E+NNTL
Sbjct: 140 PRVSVPSKPKLDRFSVPEDSIDGRETDRRTLSSLNHSSQILKHPLANETALAKTENNNTL 199
Query: 574 VFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
VFIV ANK IK AVK++YDI+ AKVNTL
Sbjct: 200 VFIVDARANKRQIKEAVKRMYDIDCAKVNTL 230
>UniRef50_A0E9R4 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=7; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_85, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 150
Score = 72.9 bits (171), Expect = 7e-12
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = +1
Query: 340 TKALKAQRKVVKGEHGKRVRKIR----NSVHFRRPKTF-EPPRHPKYPRKSLPKRNRMDA 504
T KAQ+ K+V + R N H +P PR + R+ P +D
Sbjct: 8 TTTQKAQKAAKNARVAKKVIRARTHFQNRFHTAKPLALARKPRFTRLTRQLKPITKGLDF 67
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
N++K PL +E MKK+ED NT+VF V+ A K IK A K+Y++ V KVN L+
Sbjct: 68 QNVLKHPLITEKDMKKMEDENTMVFYVNQKATKPQIKRAFSKIYEVKVRKVNILN 122
>UniRef50_UPI0000F2CCBA Cluster: PREDICTED: similar to hCG2001000;
n=1; Monodelphis domestica|Rep: PREDICTED: similar to
hCG2001000 - Monodelphis domestica
Length = 144
Score = 62.5 bits (145), Expect = 9e-09
Identities = 34/57 (59%), Positives = 40/57 (70%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
+D Y IIKFPL +E+AMKKIED++ LVF NK VKKLYDI VAKV+TL
Sbjct: 41 LDHYAIIKFPLPTESAMKKIEDDDILVFPADIKVNKQ----VVKKLYDIYVAKVSTL 93
>UniRef50_UPI0000DD7E10 Cluster: PREDICTED: similar to 60S ribosomal
protein L23a; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L23a - Homo sapiens
Length = 87
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = +1
Query: 544 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
MKKIEDNNTLVF V A KH IK AVKKLYD +VAKV+ L
Sbjct: 1 MKKIEDNNTLVFTVDVKATKHQIKQAVKKLYDTDVAKVHAL 41
>UniRef50_Q9LWB5 Cluster: 50S ribosomal protein L23, chloroplast
precursor; n=1; Spinacia oleracea|Rep: 50S ribosomal
protein L23, chloroplast precursor - Spinacia oleracea
(Spinach)
Length = 198
Score = 62.5 bits (145), Expect = 9e-09
Identities = 32/80 (40%), Positives = 48/80 (60%)
Frame = +1
Query: 427 RPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKH 606
+PKT + + KYPR+ L D Y I++ P+ +EAA+K I D N+L+F V A+K
Sbjct: 92 QPKTSKKAKKLKYPRRIL------DVYQILQSPIITEAAIKNIADENSLLFTVDVRADKK 145
Query: 607 HIKAAVKKLYDINVAKVNTL 666
I+ A+ + + V KVNTL
Sbjct: 146 MIREAISNFFGVKVRKVNTL 165
>UniRef50_A2DUV8 Cluster: Ribosomal protein L23, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L23,
putative - Trichomonas vaginalis G3
Length = 140
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSL-PKRNRMDAYNIIK 519
KA A + + +G+ K V K RN F + PR P + K++ P + + Y II+
Sbjct: 4 KAQAAAQTLAQGQK-KEVTKTRNFTKFGKNAAQVVPRRPAFEHKAVKPVSLKHNDYKIIR 62
Query: 520 FPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
P+TS+ + KIE+ NT+ F V A K I AA +LY + KV T+
Sbjct: 63 GPVTSDKSTVKIENENTMTFWVDIKATKTEIAAAFNRLYKVKPVKVCTV 111
>UniRef50_UPI0000E460DC Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 109
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 346 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRM 498
ALK ++ ++G H R RKI V FRRPKT++ R PKY RKS+PKR R+
Sbjct: 43 ALKTKKAALRGTHATRKRKIHTKVTFRRPKTYKAARVPKYTRKSIPKRPRL 93
>UniRef50_Q98RV5 Cluster: 60S ribosomal protein L23A; n=1;
Guillardia theta|Rep: 60S ribosomal protein L23A -
Guillardia theta (Cryptomonas phi)
Length = 117
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = +1
Query: 472 KSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVA 651
K++ KRN + Y + +P+TSE+AMKKI+ +NTL F+V NK+ +K + KL+ +
Sbjct: 26 KNIQKRNFI--YKQLIYPVTSESAMKKIQTSNTLTFLVEPMNNKNSLKKIISKLFKVKTI 83
Query: 652 KVNTL 666
K+N+L
Sbjct: 84 KINSL 88
>UniRef50_Q8TY92 Cluster: 50S ribosomal protein L23P; n=27;
Archaea|Rep: 50S ribosomal protein L23P - Methanopyrus
kandleri
Length = 95
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +1
Query: 499 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
D ++++ +P+ +E AM+ +E N L FIV ANK IK AV++L+D+ V KVNTL
Sbjct: 11 DPHDVLLYPVATEKAMRLMEAENKLTFIVRRDANKPLIKKAVEELFDVEVEKVNTL 66
>UniRef50_Q2NFV8 Cluster: 50S ribosomal protein L23P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L23P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 86
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/56 (48%), Positives = 33/56 (58%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
MD Y++I P SE M +I D N + F+V SANK IK A + LYD V VNT
Sbjct: 1 MDPYSVIIKPQLSEKTMNQIYDENKITFVVRRSANKRVIKEAFQDLYDTKVVGVNT 56
>UniRef50_Q748Z1 Cluster: 50S ribosomal protein L23; n=11;
Bacteria|Rep: 50S ribosomal protein L23 - Geobacter
sulfurreducens
Length = 94
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQA 675
M+ Y++IK PL +E + + N + F V ANK IK AV+KL+ + VA+VNT++ A
Sbjct: 1 MNLYDVIKKPLITEKTTIEKDSKNVVSFEVDRDANKIEIKEAVEKLFKVEVAEVNTVNVA 60
>UniRef50_Q0W1Y7 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Uncultured methanogenic archaeon RC-I
Length = 82
Score = 49.6 bits (113), Expect = 7e-05
Identities = 22/51 (43%), Positives = 33/51 (64%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
IIK+P +E A ++ NNTL F+V A K IK A++++Y++ V KV T
Sbjct: 2 IIKYPFITEKATLSLDKNNTLQFMVDMRATKPQIKKAIEEMYNVKVVKVTT 52
>UniRef50_Q5FTY5 Cluster: 50S ribosomal protein L23; n=58;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 107
Score = 48.0 bits (109), Expect = 2e-04
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
Y++++ PL +E A + + N +VF V SA K IKAAV+KL+++ V VNTL Q
Sbjct: 16 YDVVRAPLITEKATL-LSERNQVVFKVAPSATKPQIKAAVEKLFNVKVTGVNTLVQ 70
>UniRef50_A0T0X4 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Thalassiosira pseudonana|Rep: Chloroplast 50S
ribosomal protein L23 - Thalassiosira pseudonana (Marine
diatom)
Length = 98
Score = 47.6 bits (108), Expect = 3e-04
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +1
Query: 490 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
N +D N+IK+P+ ++ A + + NN FIV ++K IKAA++ L+++ V K+NT H
Sbjct: 3 NSLDM-NVIKYPIITDKATRLLA-NNQYSFIVSPKSDKPTIKAAIEYLFNVKVVKINTAH 60
>UniRef50_Q15YN7 Cluster: 50S ribosomal protein L23; n=8;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 100
Score = 47.2 bits (107), Expect = 4e-04
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
++ P SE A E NNT+VF V ANK IKAAV+KL+++ V V T++
Sbjct: 10 VVLAPHVSEKATLAAEVNNTVVFKVLKDANKEEIKAAVEKLFEVEVNSVRTVN 62
>UniRef50_UPI0000D65CF0 Cluster: PREDICTED: similar to hCG2001000;
n=1; Mus musculus|Rep: PREDICTED: similar to hCG2001000
- Mus musculus
Length = 137
Score = 46.8 bits (106), Expect = 5e-04
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
K L K +K + ++ R ++ F +PKT R P + +P+R+++ + I
Sbjct: 5 KPLLLPSKGLKSQESGAIK--RRALAFWQPKTLWLWRQPNTLSR-MPRRSQLKHHQI--- 58
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKK---LYDINVAKVNTL 666
P + + ++ EDN T VF V ANK +K AVKK + DI +AKVNTL
Sbjct: 59 PPDNWVSQEETEDN-TSVFTVDVQANKSQMKEAVKKVNDICDIAMAKVNTL 108
>UniRef50_P0ADZ3 Cluster: 50S ribosomal protein L23; n=59;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Shigella flexneri
Length = 100
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
+++ P SE A +E +NT+V V A K IKAAV+KL+++ V VNTL
Sbjct: 10 VLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTL 61
>UniRef50_A6DPN6 Cluster: 50S ribosomal protein L23; n=1;
Lentisphaera araneosa HTCC2155|Rep: 50S ribosomal
protein L23 - Lentisphaera araneosa HTCC2155
Length = 93
Score = 46.0 bits (104), Expect = 9e-04
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
M Y +IK + +E + +ED N F V +SANK I AV+K++++ V VNT++
Sbjct: 1 MSNYKVIKTVVLTEKSSAAMEDQNKYTFKVASSANKIEIANAVQKIFNVKVQSVNTMN 58
>UniRef50_Q8XHS5 Cluster: 50S ribosomal protein L23; n=14;
Clostridia|Rep: 50S ribosomal protein L23 - Clostridium
perfringens
Length = 97
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/58 (36%), Positives = 40/58 (68%)
Frame = +1
Query: 493 RMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
++ +++II+ P+ +E +M + +N FIVH +ANK IK AV++++++ VA V T+
Sbjct: 2 KLTSHDIIRKPVITEKSMAAMAENK-YTFIVHMAANKVQIKRAVEEVFNVKVADVKTM 58
>UniRef50_O26112 Cluster: 50S ribosomal protein L23P; n=2;
Methanothermobacter thermautotrophicus str. Delta H|Rep:
50S ribosomal protein L23P - Methanobacterium
thermoautotrophicum
Length = 86
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
MD Y +I P +E +M I+ NN L F+V + K ++ A ++L+ + V +VNT
Sbjct: 1 MDPYAVIMKPHVTEKSMNLIDQNNELAFVVMRKSTKKDVRRAFEELFAVKVERVNT 56
>UniRef50_Q1VGG2 Cluster: 50S ribosomal protein L23; n=1;
Psychroflexus torquis ATCC 700755|Rep: 50S ribosomal
protein L23 - Psychroflexus torquis ATCC 700755
Length = 63
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 660
M+AY+II P +E +M+ L FIV SA+K I AV+ ++D+ V KVN
Sbjct: 1 MNAYDIIIQPWLTEKSMEARSTQQRLEFIVRRSASKDDIAKAVETIFDVEVEKVN 55
>UniRef50_Q6A6M8 Cluster: 50S ribosomal protein L23; n=36;
Bacteria|Rep: 50S ribosomal protein L23 -
Propionibacterium acnes
Length = 102
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/58 (36%), Positives = 36/58 (62%)
Frame = +1
Query: 499 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
D +II P+ SE + + D NT F+V +ANK IK A+++++ + V VNT+++
Sbjct: 8 DPRDIILAPVVSEKSYGLL-DQNTYTFVVKPTANKTEIKIAIEQIFGVKVTSVNTMNR 64
>UniRef50_Q2FU93 Cluster: 50S ribosomal protein L23P; n=1;
Methanospirillum hungatei JF-1|Rep: 50S ribosomal
protein L23P - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 82
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
I+K+P +E A +E + L FIV A+K IK A++K++D V +V TL
Sbjct: 2 ILKYPYATEKASMIVERDGQLQFIVDRKASKGQIKVAIEKMFDQPVTRVRTL 53
>UniRef50_Q02W26 Cluster: 50S ribosomal protein L23; n=7;
Bacilli|Rep: 50S ribosomal protein L23 - Lactococcus
lactis subsp. cremoris (strain SK11)
Length = 97
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
M Y+II+ P+ +EA+M + D F V + A+K IK AV+ ++D+ VA VNT+
Sbjct: 1 MSLYDIIRKPIITEASMAAM-DQKKYTFEVDSRAHKLLIKQAVEAVFDVKVASVNTI 56
>UniRef50_O66433 Cluster: 50S ribosomal protein L23; n=10;
Bacteria|Rep: 50S ribosomal protein L23 - Aquifex
aeolicus
Length = 103
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
+ II P+ +E + + +ED N F V A+K IK AV+KL+++ V KVNT+
Sbjct: 7 WEIIIRPIITEKSNRLMEDYNKYTFEVALDASKPEIKYAVEKLFNVKVKKVNTM 60
>UniRef50_Q6B8V5 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Eukaryota|Rep: Chloroplast 50S ribosomal protein
L23 - Gracilaria tenuistipitata var. liui (Red alga)
Length = 103
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/53 (37%), Positives = 34/53 (64%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
+IIK+P+ ++ + IE+N F V A K IK A+++L+D+ V ++NTL
Sbjct: 14 DIIKYPILTDKTTQMIEENK-YSFAVEVKAKKPKIKEAIEQLFDVKVQQINTL 65
>UniRef50_Q6YR18 Cluster: 50S ribosomal protein L23; n=3; Candidatus
Phytoplasma|Rep: 50S ribosomal protein L23 - Onion
yellows phytoplasma
Length = 96
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
Y+++K P+ +E K IE N F V +ANK IK A++ ++ + V VNT
Sbjct: 5 YDLVKAPIITELTNKLIERQNKYTFKVAKTANKVEIKKALESIFQVKVLSVNT 57
>UniRef50_Q4G363 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Emiliania huxleyi|Rep: Chloroplast 50S ribosomal
protein L23 - Emiliania huxleyi
Length = 99
Score = 43.6 bits (98), Expect = 0.005
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
++IK+P+ +E + IE N F V A+K IK+AV+ L+D+ V VNT +Q
Sbjct: 10 DLIKYPILTEKTSRLIEQNQ-YSFAVDRKADKISIKSAVEALFDVQVVAVNTANQ 63
>UniRef50_A6NXD1 Cluster: 50S ribosomal protein L23; n=1;
Bacteroides capillosus ATCC 29799|Rep: 50S ribosomal
protein L23 - Bacteroides capillosus ATCC 29799
Length = 99
Score = 43.2 bits (97), Expect = 0.006
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +1
Query: 502 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
AY+IIK P+ +E +M+ E F V SANK I AV++++ + V KVNTL+
Sbjct: 5 AYDIIKRPVITEQSMEMTEMKR-YTFEVAKSANKIEIAKAVEEIFGVKVVKVNTLN 59
>UniRef50_Q673S7 Cluster: 50S ribosomal protein L23; n=2;
environmental samples|Rep: 50S ribosomal protein L23 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 96
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 10/66 (15%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAM--KKIED--------NNTLVFIVHTSANKHHIKAAVKKLYDIN 645
+D Y++IK P +E + +++ D NN + FIV K IKAAV++L D+
Sbjct: 2 IDPYSVIKMPWITEKTLEARRVSDKEGGYRENNNRIEFIVRRETTKADIKAAVEELLDVQ 61
Query: 646 VAKVNT 663
V KVNT
Sbjct: 62 VVKVNT 67
>UniRef50_Q6N4T7 Cluster: 50S ribosomal protein L23; n=12;
Proteobacteria|Rep: 50S ribosomal protein L23 -
Rhodopseudomonas palustris
Length = 99
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/54 (42%), Positives = 33/54 (61%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
Y++I P+ +E + E +N +VF V A K IK AV+KL+D+ V VNTL
Sbjct: 9 YDVIVAPVVTEKSTMASE-HNKVVFKVQGGATKPQIKEAVEKLFDVKVKSVNTL 61
>UniRef50_Q7VKD4 Cluster: 50S ribosomal protein L23; n=27;
Gammaproteobacteria|Rep: 50S ribosomal protein L23 -
Haemophilus ducreyi
Length = 101
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
++K P SE A K E NT+VF V ANK + AV++L+++ V V T+
Sbjct: 10 VLKAPHISEKATKNAEKGNTIVFKVALDANKVEVANAVQELFEVKVDSVRTV 61
>UniRef50_Q1Q136 Cluster: Strongly similar to 50S ribosomal protein
L23; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Strongly similar to 50S ribosomal protein L23 -
Candidatus Kuenenia stuttgartiensis
Length = 93
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/57 (38%), Positives = 33/57 (57%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
MD Y++IK PL +E ++ E N+ F V ANK IK A++ ++ + V V TL
Sbjct: 1 MDKYDVIKGPLRTEKSVSDGEKTNSYHFDVDLKANKIQIKNAIEGIFGVKVNGVRTL 57
>UniRef50_A5TVD5 Cluster: 50S ribosomal protein L23; n=3;
Fusobacterium nucleatum|Rep: 50S ribosomal protein L23 -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 95
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
M+ Y+IIK P+ +E ++ N F VH ANK IK A++ ++++ V V T+++
Sbjct: 1 MNVYDIIKKPVVTEKTELLRKEYNKYTFEVHPKANKIEIKKAIETIFNVKVEDVATINK 59
>UniRef50_P12732 Cluster: 50S ribosomal protein L23P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L23P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 85
Score = 42.7 bits (96), Expect = 0.008
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +1
Query: 502 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
++++IK P +E AM ++ N L F V A+K + AV++ YD+ V +VNT
Sbjct: 2 SWDVIKHPHVTEKAMNDMDFQNKLQFAVDDRASKGEVADAVEEQYDVTVEQVNT 55
>UniRef50_P94269 Cluster: 50S ribosomal protein L23; n=3; Borrelia
burgdorferi group|Rep: 50S ribosomal protein L23 -
Borrelia burgdorferi (Lyme disease spirochete)
Length = 103
Score = 42.7 bits (96), Expect = 0.008
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 487 RNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
R M AY+II P+ +E + E N VF V+ ANK + AA+K+L+++ N L
Sbjct: 3 RISMKAYDIIVSPMLTEKTNTQRESINVYVFKVNKRANKKEVGAAIKELFNVTPVSCNLL 62
Query: 667 H 669
+
Sbjct: 63 N 63
>UniRef50_Q6SG46 Cluster: 50S ribosomal protein L23; n=3;
Bacteria|Rep: 50S ribosomal protein L23 - uncultured
bacterium 562
Length = 98
Score = 42.3 bits (95), Expect = 0.011
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
+ +IK P+ +E + + E +VF V +ANK IK AV++L+ + V KV T
Sbjct: 7 FTLIKSPIVTEKSARVGESLKQIVFKVDLTANKREIKKAVEELFKVEVTKVTT 59
>UniRef50_Q9RA57 Cluster: 50S ribosomal protein L23; n=14;
Bacteria|Rep: 50S ribosomal protein L23 - Thermus
thermophilus
Length = 96
Score = 42.3 bits (95), Expect = 0.011
Identities = 23/56 (41%), Positives = 30/56 (53%)
Frame = +1
Query: 502 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
AY++I P+ SE A + F VH A K IK AV+ + + V KVNTLH
Sbjct: 4 AYDVILAPVLSEKAYAGFAEGK-YTFWVHPKATKTEIKNAVETAFKVKVVKVNTLH 58
>UniRef50_P38512 Cluster: 50S ribosomal protein L23; n=7;
Bacteria|Rep: 50S ribosomal protein L23 - Thermotoga
maritima
Length = 100
Score = 41.9 bits (94), Expect = 0.014
Identities = 20/62 (32%), Positives = 40/62 (64%)
Frame = +1
Query: 484 KRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
K+ ++ ++++ P+ +E A+ + + VF V+ ANK+ +K AV+KL+++ V KVN
Sbjct: 2 KQEKLSLHDVLIRPIITEKALI-LREQRKYVFEVNPLANKNLVKEAVEKLFNVKVEKVNI 60
Query: 664 LH 669
L+
Sbjct: 61 LN 62
>UniRef50_Q97EI0 Cluster: 50S ribosomal protein L23; n=26;
Firmicutes|Rep: 50S ribosomal protein L23 - Clostridium
acetobutylicum
Length = 98
Score = 41.5 bits (93), Expect = 0.019
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +1
Query: 499 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
++++II+ P+ +E +M ++ D FIV ANK IK A+++++ + V KVNT
Sbjct: 4 NSHDIIRKPVITEKSMAEMADKK-YTFIVDPHANKVQIKKAIEEVFGVKVEKVNT 57
>UniRef50_O28356 Cluster: 50S ribosomal protein L23P; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L23P -
Archaeoglobus fulgidus
Length = 83
Score = 41.5 bits (93), Expect = 0.019
Identities = 21/52 (40%), Positives = 33/52 (63%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
+IK L +E ++ ++E N L IV A K HIK ++KL+++ V +VNTL
Sbjct: 4 LIKCFLVTEKSVAELE-KNVLTAIVDMRARKEHIKKEIEKLFNVEVERVNTL 54
>UniRef50_Q5GSU6 Cluster: 50S ribosomal protein L23; n=2;
Wolbachia|Rep: 50S ribosomal protein L23 - Wolbachia sp.
subsp. Brugia malayi (strain TRS)
Length = 95
Score = 41.1 bits (92), Expect = 0.025
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
NI+K P+ +E A E N V + NKH IK+A++ L+++ V+ +N +
Sbjct: 6 NIVKCPIITEKASFLREKFNKYSLYVFVNVNKHKIKSAIESLFNVKVSSINVV 58
>UniRef50_Q1UZG5 Cluster: 50S ribosomal protein L23; n=2; Candidatus
Pelagibacter ubique|Rep: 50S ribosomal protein L23 -
Candidatus Pelagibacter ubique HTCC1002
Length = 97
Score = 40.3 bits (90), Expect = 0.043
Identities = 17/61 (27%), Positives = 38/61 (62%)
Frame = +1
Query: 490 NRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
+++ Y+ I P+ +E + + N +VF V +ANK ++K ++K++ +NV K+N ++
Sbjct: 2 DKIHLYDKILSPMVTEKTTN-LSEQNKIVFKVPRAANKTNLKKNIEKIFKVNVTKINIIN 60
Query: 670 Q 672
+
Sbjct: 61 K 61
>UniRef50_Q7NPG8 Cluster: 50S ribosomal protein L23; n=7; cellular
organisms|Rep: 50S ribosomal protein L23 - Gloeobacter
violaceus
Length = 100
Score = 40.3 bits (90), Expect = 0.043
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
+II+ PL +E + +E+N L F V ANK I A+++L+ + V KVNT +
Sbjct: 11 DIIRRPLITEKGTRLLEENKYL-FEVTPGANKIQIAQAIEELFSVKVTKVNTFN 63
>UniRef50_Q6AP69 Cluster: 50S ribosomal protein L23; n=2;
Deltaproteobacteria|Rep: 50S ribosomal protein L23 -
Desulfotalea psychrophila
Length = 95
Score = 40.3 bits (90), Expect = 0.043
Identities = 19/53 (35%), Positives = 31/53 (58%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
Y ++K P+ +E A E + +VF VH +NK IK A++ ++D+ V V T
Sbjct: 5 YGVLKGPVLTEKAAILQEIDGQVVFKVHPKSNKIEIKRAIELMFDVKVKDVRT 57
>UniRef50_A1Y9U8 Cluster: 50S ribosomal protein L23; n=7;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Flavobacterium hibernum
Length = 96
Score = 39.9 bits (89), Expect = 0.057
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
+II P+ +E K+ E N F+V ANK IK AV+ Y + + VNT++
Sbjct: 2 SIIIRPIVTEKVTKESEVLNRFGFVVDKKANKVQIKKAVEAAYGVTIVSVNTMN 55
>UniRef50_Q7V9W4 Cluster: 50S ribosomal protein L23; n=32; cellular
organisms|Rep: 50S ribosomal protein L23 -
Prochlorococcus marinus
Length = 102
Score = 39.9 bits (89), Expect = 0.057
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
++I+ PL +E A K + D N F V A K IKAAV+KL+D+ V ++T++
Sbjct: 11 DVIRRPLITEKATKGL-DINQYTFEVDHRAAKPDIKAAVEKLFDVKVIGISTMN 63
>UniRef50_Q8PV48 Cluster: 50S ribosomal protein L23P; n=4;
Methanosarcinaceae|Rep: 50S ribosomal protein L23P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 82
Score = 39.9 bits (89), Expect = 0.057
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +1
Query: 514 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
I +P +E AM + D N L FIV T +NK I V+KLY V V T+
Sbjct: 4 INYPFVTEKAMMLL-DENKLQFIVDTRSNKKQIVEDVEKLYGFKVKAVRTM 53
>UniRef50_UPI0000E212CE Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 255
Score = 39.5 bits (88), Expect = 0.075
Identities = 24/47 (51%), Positives = 27/47 (57%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 402
A S V NLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 166 AYSVVSRNLMIARWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 212
>UniRef50_Q553D8 Cluster: Putative uncharacterized protein; n=2;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum AX4
Length = 120
Score = 39.5 bits (88), Expect = 0.075
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 547 KKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
K E+ N ++F S K IK +K LYD+NV KVNT++
Sbjct: 33 KTFENTNKIMFKTDCSVGKTDIKTYMKALYDVNVDKVNTIN 73
>UniRef50_Q5LLU8 Cluster: 50S ribosomal protein L23; n=55;
Alphaproteobacteria|Rep: 50S ribosomal protein L23 -
Silicibacter pomeroyi
Length = 98
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
Y++I+ P+ +E + E N +VF V +NK IK AV+ L+ + V VNT
Sbjct: 8 YDVIRKPIITEKSTMASE-NGAVVFEVSIDSNKPQIKEAVESLFGVKVKAVNT 59
>UniRef50_Q6KI53 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
mobile|Rep: 50S ribosomal protein L23 - Mycoplasma
mobile
Length = 213
Score = 38.7 bits (86), Expect = 0.13
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 660
M+ IIK+PL +E + K + N VF V A K IK A++ ++++ V K+N
Sbjct: 1 MNHNEIIKYPLLTEKSYKTMA-QNVYVFAVDRRARKIEIKDAIEFIFEVKVEKIN 54
>UniRef50_Q1VLV7 Cluster: 50S ribosomal protein L23; n=2;
Flavobacteriaceae|Rep: 50S ribosomal protein L23 -
Psychroflexus torquis ATCC 700755
Length = 106
Score = 38.3 bits (85), Expect = 0.17
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
IIK LT + A+ + E N FIV +ANK IK+AV+ ++++V+KV T++
Sbjct: 6 IIKPILTEKMAIMQ-ERQNKYAFIVSHNANKIQIKSAVENKFNVSVSKVATMN 57
>UniRef50_A7DSZ2 Cluster: Ribosomal protein L25/L23; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L25/L23 - Candidatus Nitrosopumilus maritimus SCM1
Length = 88
Score = 38.3 bits (85), Expect = 0.17
Identities = 21/54 (38%), Positives = 28/54 (51%)
Frame = +1
Query: 502 AYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
A II P +E +E+ + + FIV SA+K I AV LY+ V VNT
Sbjct: 6 ASKIILKPYITEKTFAMVENESKICFIVERSASKPEISEAVNTLYNEKVLNVNT 59
>UniRef50_P75578 Cluster: 50S ribosomal protein L23; n=2;
Mycoplasma|Rep: 50S ribosomal protein L23 - Mycoplasma
pneumoniae
Length = 237
Score = 38.3 bits (85), Expect = 0.17
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 496 MDAYNIIKFP-LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
MD N++ P LT + ++ + VF+V+ A+K +K A + +Y I KVNTL
Sbjct: 1 MDVTNVLLKPVLTEKVYFNQMGETKKYVFVVNPKASKTRVKLAFELVYGIKPLKVNTL 58
>UniRef50_Q14JB8 Cluster: 50S ribosomal protein L23; n=8;
Francisella tularensis|Rep: 50S ribosomal protein L23 -
Francisella tularensis subsp. tularensis (strain FSC
198)
Length = 99
Score = 38.3 bits (85), Expect = 0.17
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +1
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
P S+ + N+T+VF V ANK +K AV+KL+++ V VN L+
Sbjct: 14 PHVSDKTYGLSDANSTIVFEVARFANKQDVKNAVEKLFEVKVESVNILN 62
>UniRef50_A5CCL0 Cluster: 50S ribosomal protein L23; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L23 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 98
Score = 37.9 bits (84), Expect = 0.23
Identities = 17/55 (30%), Positives = 35/55 (63%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
Y++I P+ +E + E +F+V +ANK++I A++ ++++NV KVN ++
Sbjct: 6 YDLIVKPVVTEKSTLASECKK-YIFLVQRNANKYNISKAIEGIFNVNVIKVNIIN 59
>UniRef50_A5KRQ3 Cluster: 50S ribosomal protein L23; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L23 - candidate division TM7 genomosp. GTL1
Length = 102
Score = 37.5 bits (83), Expect = 0.30
Identities = 21/48 (43%), Positives = 23/48 (47%)
Frame = +1
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
P SE A NT VF+V NK I AV Y + VAKV TL
Sbjct: 8 PRVSEKAYGLASVGNTYVFVVPIKVNKQQIADAVATQYGVKVAKVTTL 55
>UniRef50_Q9L0D8 Cluster: 50S ribosomal protein L23; n=16;
Actinomycetales|Rep: 50S ribosomal protein L23 -
Streptomyces coelicolor
Length = 139
Score = 37.1 bits (82), Expect = 0.40
Identities = 18/58 (31%), Positives = 33/58 (56%)
Frame = +1
Query: 499 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
D +++ P+ SE + + D N F+V +NK IK AV+ ++ + V VNT+++
Sbjct: 45 DPRDVLLKPVVSEKSYALL-DENKYTFVVAPGSNKTQIKEAVQAVFSVKVTGVNTINR 101
>UniRef50_Q8A478 Cluster: 50S ribosomal protein L23; n=11;
Bacteroidetes|Rep: 50S ribosomal protein L23 -
Bacteroides thetaiotaomicron
Length = 96
Score = 37.1 bits (82), Expect = 0.40
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQA 675
IIK PL +E + N F+V ANK IK V+ LY++ V VNT+ A
Sbjct: 4 IIK-PLVTEKMTAITDKLNRFGFVVRPDANKLEIKKEVEALYNVTVVDVNTVKYA 57
>UniRef50_Q0EW38 Cluster: 50S ribosomal protein L23; n=1;
Mariprofundus ferrooxydans PV-1|Rep: 50S ribosomal
protein L23 - Mariprofundus ferrooxydans PV-1
Length = 99
Score = 37.1 bits (82), Expect = 0.40
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 505 YNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
+NI++ P+ +E + N F V A+K +KAA++ ++++NV KV ++
Sbjct: 8 FNILRQPVITEKSYTATGAANQYTFRVAREASKAQVKAAIEAIFEVNVDKVQVIN 62
>UniRef50_Q4A5C3 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
synoviae 53|Rep: 50S ribosomal protein L23 - Mycoplasma
synoviae (strain 53)
Length = 158
Score = 36.7 bits (81), Expect = 0.53
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
M+ +I+ P+ +E + + D F V ANKH IK AV+ ++ + V VNT+
Sbjct: 1 MELTRVIQAPIITEKTDRLLLDRK-YTFKVDYFANKHQIKQAVETIFKVEVVDVNTI 56
>UniRef50_Q5BHZ4 Cluster: GM06171p; n=1; Drosophila
melanogaster|Rep: GM06171p - Drosophila melanogaster
(Fruit fly)
Length = 290
Score = 36.7 bits (81), Expect = 0.53
Identities = 18/49 (36%), Positives = 29/49 (59%)
Frame = +3
Query: 462 IPKEVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCSHKCKQAP 608
+P+E+ A ++ HG +QHH +P+ +EED QH GL + +Q P
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGLPHTPARQQEP 211
>UniRef50_Q6L1C5 Cluster: 50S ribosomal protein L23P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L23P -
Picrophilus torridus
Length = 82
Score = 36.3 bits (80), Expect = 0.70
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
P+ +E +E N + F+V+ A K IK V+ +++ VAKVN +
Sbjct: 7 PIVTEKTTLMMEKENKITFLVNRKATKEAIKNEVEARFNVKVAKVNMM 54
>UniRef50_Q8EUB5 Cluster: 50S ribosomal protein L23; n=1; Mycoplasma
penetrans|Rep: 50S ribosomal protein L23 - Mycoplasma
penetrans
Length = 138
Score = 35.9 bits (79), Expect = 0.93
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMK-KIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQ 672
MD ++I PL SE + + ED VF V+ +ANK+ I A + +Y I KVN +++
Sbjct: 1 MDLLSVIIKPLHSEKSYSLRNEDIKKYVFEVNRNANKYEISLAFQLIYGIVPNKVNVVNR 60
>UniRef50_Q7VQE6 Cluster: 50S ribosomal protein L23; n=1; Candidatus
Blochmannia floridanus|Rep: 50S ribosomal protein L23 -
Blochmannia floridanus
Length = 99
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
+IK P SE + ++ NN +V V K I+ AV L+ + + K+N L
Sbjct: 9 VIKAPHVSEKSSIALDKNNVIVLKVVNYVTKQDIRHAVCMLFSVKIKKINVL 60
>UniRef50_Q81VS8 Cluster: 50S ribosomal protein L23; n=56;
Firmicutes|Rep: 50S ribosomal protein L23 - Bacillus
anthracis
Length = 96
Score = 34.7 bits (76), Expect = 2.1
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +1
Query: 499 DAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
D +IIK P+ +E +M+ + + F V +NK +K A++ ++ + V KVN ++
Sbjct: 3 DPRDIIKRPVITERSMEMMAEKK-YTFDVDVKSNKTEVKDALEAIFGVKVEKVNIMN 58
>UniRef50_Q06SH7 Cluster: Chloroplast 50S ribosomal protein L23;
n=1; Stigeoclonium helveticum|Rep: Chloroplast 50S
ribosomal protein L23 - Stigeoclonium helveticum (Green
alga)
Length = 118
Score = 34.7 bits (76), Expect = 2.1
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
++IK+P+ + + + + NN +F V K IK +++ +++NV VNT
Sbjct: 3 DLIKYPVINFKSYRALVLNNQYMFNVDLRLTKPQIKKLIEQYFEVNVISVNT 54
>UniRef50_UPI0001555FAF Cluster: PREDICTED: similar to ribosomal
protein L23, partial; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L23, partial -
Ornithorhynchus anatinus
Length = 75
Score = 34.3 bits (75), Expect = 2.8
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 514 IKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLHQA 675
IK + SE K E VF V +ANK IK V+ ++++ V VNTL++A
Sbjct: 5 IKEAVLSEKTFAKAEQK-VYVFRVAKNANKLKIKQDVEYIFNVKVKAVNTLNEA 57
>UniRef50_Q9PQQ8 Cluster: 50S ribosomal protein L23; n=1; Ureaplasma
parvum|Rep: 50S ribosomal protein L23 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 105
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEA--AMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
M+ +I P T+E +++ ++ TL FIV +ANK+ I+ A ++ + K+ T +
Sbjct: 1 MELTRVILHPYTTEKTYSIRNKSEHETLTFIVDKNANKYQIREAFIAIFGLKPLKIRTTN 60
Query: 670 Q 672
+
Sbjct: 61 R 61
>UniRef50_A5K3S7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 122
Score = 33.9 bits (74), Expect = 3.7
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 352 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRK-SLPKRNRMDAYNIIK 519
K +K+ + ++GK++R+ +N RRPK + R PK +K P++ + D N IK
Sbjct: 36 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPEKRQKD--NTIK 90
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 352 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 492
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 9 KNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 55
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 352 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 492
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 18 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 64
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +1
Query: 352 KAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 492
K +K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 27 KNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 73
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 361 RKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRN 492
+K+ + ++GK++R+ +N RRPK + R PK +K +N
Sbjct: 3 KKIRRQKNGKKIRRQKNGKKIRRPKNGKKIRRPKNGKKIRRPKN 46
>UniRef50_Q6C803 Cluster: Yarrowia lipolytica chromosome D of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome D of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 964
Score = 33.9 bits (74), Expect = 3.7
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -1
Query: 639 IIEFLDCSLDMVLVCTCVNNKDQGVVIFNLLHCCFRREREFN-DVVGIHA-ISLRQRLPW 466
++E +C + V V V K + VV+ HC R + N D+ I RQ LPW
Sbjct: 119 VLECYNCGNENVFVLGFVTAKLENVVVLLCRHCIQRSPSDANWDIREWQTLIEDRQFLPW 178
Query: 465 VFRVPRR 445
+ +PRR
Sbjct: 179 LVPIPRR 185
>UniRef50_Q08ZJ6 Cluster: 50S ribosomal protein L23; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: 50S ribosomal
protein L23 - Stigmatella aurantiaca DW4/3-1
Length = 99
Score = 33.5 bits (73), Expect = 4.9
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
M+ +++IK PL +E K E FIV A K + AV+ L+ ++V V T
Sbjct: 1 MNIHDVIKGPLITEKLDKAREKFRQYSFIVDKKATKIDVARAVENLFKVSVEGVRT 56
>UniRef50_Q06VN4 Cluster: Putative uncharacterized protein; n=1;
Trichoplusia ni ascovirus 2c|Rep: Putative
uncharacterized protein - Trichoplusia ni ascovirus 2c
Length = 73
Score = 33.1 bits (72), Expect = 6.5
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 382 HGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 561
H K RK+ N+ ++PK F P P PR SL + D I + + + + + +
Sbjct: 6 HKKHCRKLYNTYSTKKPKRFFKPSRPPPPRNSLVDDDDDDDDKTITYSIGNLETLLLLLN 65
Query: 562 NN 567
NN
Sbjct: 66 NN 67
>UniRef50_Q6CUR1 Cluster: Similar to sp|P53583 Saccharomyces
cerevisiae YNL249c MPA43; n=1; Kluyveromyces lactis|Rep:
Similar to sp|P53583 Saccharomyces cerevisiae YNL249c
MPA43 - Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 516
Score = 33.1 bits (72), Expect = 6.5
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = -1
Query: 654 FSNIYIIEFLDCSLDMVLVCTCV--NNKDQGVVIFNLLH 544
F+ +YI E+ CSL + C+ V KD+ ++ FNL+H
Sbjct: 60 FNTLYIQEYNICSLGVGATCSMVVGKQKDENLIPFNLIH 98
>UniRef50_O52334 Cluster: 50S ribosomal protein L23; n=2; Mycoplasma
gallisepticum|Rep: 50S ribosomal protein L23 -
Mycoplasma gallisepticum
Length = 108
Score = 33.1 bits (72), Expect = 6.5
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +1
Query: 511 IIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
+IK LT + + + F+V+ ANK++IK A K +Y + VNT
Sbjct: 7 LIKPILTEKTYGIMMSEPRKYTFLVNAKANKNYIKQAFKAIYGVTPIAVNT 57
>UniRef50_P10140 Cluster: 50S ribosomal protein L23; n=4;
Mollicutes|Rep: 50S ribosomal protein L23 - Mycoplasma
capricolum subsp. capricolum (strain California kid /
ATCC27343 / NCTC 10154)
Length = 94
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +1
Query: 496 MDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLH 669
M ++K P+ +E + +DN F+V ANK IK ++++++ V V T++
Sbjct: 1 MHITEVLKKPVLTEKSFAGHKDN-VYTFLVDKKANKVQIKKTFEEIFEVKVESVRTIN 57
>UniRef50_Q1KVT6 Cluster: Chloroplast 50S ribosomal protein L23;
n=2; Scenedesmus obliquus|Rep: Chloroplast 50S ribosomal
protein L23 - Scenedesmus obliquus
Length = 90
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNT 663
+ IK+P+T+E + + N F V K IK + L+ +NV +NT
Sbjct: 4 DFIKYPVTTEKSYLSMFKNKQYTFDVDLRLTKPQIKKLFETLFGVNVIGINT 55
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 470,537,216
Number of Sequences: 1657284
Number of extensions: 8577188
Number of successful extensions: 25784
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 25008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25749
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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