Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0248
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.8  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   3.1  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.1  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.2  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.5  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   9.5  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 497 WMPTTSLNSLSRLKQQ*RRLKITTPWSLLFTQVQ 598
           WMP+T  N L  L      +KI    S+L+   Q
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISMLYIGYQ 886



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 259 AWVWQFWLL 233
           AW+W  WLL
Sbjct: 451 AWIWLVWLL 459


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 497 WMPTTSLNSLSRLKQQ*RRLKITTPWSLLFTQVQ 598
           WMP+T  N L  L      +KI    S+L+   Q
Sbjct: 853 WMPSTMANILDLLMDYEHTVKINENISMLYIGYQ 886



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 259 AWVWQFWLL 233
           AW+W  WLL
Sbjct: 451 AWIWLVWLL 459


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = +3

Query: 222 GCGNSSQNCQTQASSFQIEDCTEAQKDW 305
           G G   + C T A  F   DC+     W
Sbjct: 498 GNGRCDEECNTYACEFDGNDCSLGINPW 525


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -3

Query: 295 WASVQSSIWKLLAWVWQFWLLLPQ 224
           W S +S +   LAWV      +PQ
Sbjct: 151 WTSRRSKVMVYLAWVASLAFCIPQ 174


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 259 AWVWQFWLL 233
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 259 AWVWQFWLL 233
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 259 AWVWQFWLL 233
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 259 AWVWQFWLL 233
           AW+W  WLL
Sbjct: 464 AWIWLLWLL 472


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -3

Query: 259 AWVWQFWLL 233
           AW+W  WLL
Sbjct: 218 AWIWLVWLL 226


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 606 VLVCTCVNNKDQGVVIFNLLHCCFRREREFNDVVGI 499
           ++VC  V   D+ V I+ L++ C     + ND   I
Sbjct: 288 MIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -1

Query: 606 VLVCTCVNNKDQGVVIFNLLHCCFRREREFNDVVGI 499
           ++VC  V   D+ V I+ L++ C     + ND   I
Sbjct: 288 MIVCPIVWLMDEVVEIYLLVYACASTCEQANDTPSI 323


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = -3

Query: 490 FS*AETSLGI*GA*EVQTSWVCGNAQSCEFS 398
           F      + + G   + T W+C     C+FS
Sbjct: 717 FKITSVMIAVSGLVYIATVWICTLMNRCKFS 747


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 501 IHAISLRQRLPWVF 460
           +HAI++R    W F
Sbjct: 91  VHAITIRSTFSWTF 104


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -2

Query: 614 LIWCLFALV*TIKTKVLLSSIFFIAASDVR 525
           L+W     +  +    ++  +FF   SDVR
Sbjct: 256 LLWITVTFILLVGDSYIVMYVFFFHLSDVR 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,516
Number of Sequences: 336
Number of extensions: 2321
Number of successful extensions: 22
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)