Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0248
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 158 2e-38
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 158 2e-38
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 158 2e-38
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 158 2e-38
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 158 2e-38
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 158 2e-38
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 154 3e-37
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 142 1e-33
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 142 1e-33
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 142 1e-33
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 142 1e-33
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 127 3e-29
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 118 3e-26
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 117 3e-26
BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein. 52 3e-06
BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein. 52 3e-06
AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibilit... 51 4e-06
AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibilit... 51 4e-06
AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibilit... 51 4e-06
AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibilit... 51 4e-06
AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibilit... 51 4e-06
AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibilit... 51 4e-06
AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibili... 51 4e-06
BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibilit... 47 5e-05
BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibilit... 47 5e-05
BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein. 47 5e-05
AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens ... 43 0.001
BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein. 32 1.7
EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat ... 30 6.7
DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein. 30 6.7
AK095193-1|BAC04496.1| 389|Homo sapiens protein ( Homo sapiens ... 30 6.7
AY705392-1|AAU10527.1| 921|Homo sapiens calcium/calmodulin-depe... 30 8.9
AK001237-1|BAA91573.1| 589|Homo sapiens protein ( Homo sapiens ... 30 8.9
AF032119-1|AAB88125.1| 921|Homo sapiens hCASK protein. 30 8.9
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 158 bits (383), Expect = 2e-38
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTL
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTL 127
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 158 bits (383), Expect = 2e-38
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTL
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTL 127
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 158 bits (383), Expect = 2e-38
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTL
Sbjct: 71 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTL 118
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 158 bits (383), Expect = 2e-38
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTL
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTL 127
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 158 bits (383), Expect = 2e-38
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTL
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTL 127
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 158 bits (383), Expect = 2e-38
Identities = 76/108 (70%), Positives = 87/108 (80%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH IK AVKKLYDI+VAKVNTL
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTL 127
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 154 bits (373), Expect = 3e-37
Identities = 74/108 (68%), Positives = 85/108 (78%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG H + +KIR S FRRPKT R PKYPRKS P+RN++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+AMKKIEDNNTLVFIV ANKH I AVKKLYDI+VAKVNTL
Sbjct: 80 PLTTESAMKKIEDNNTLVFIVDVKANKHQISQAVKKLYDIDVAKVNTL 127
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 142 bits (344), Expect = 1e-33
Identities = 70/108 (64%), Positives = 84/108 (77%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTL 127
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 142 bits (344), Expect = 1e-33
Identities = 70/108 (64%), Positives = 84/108 (77%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTL 127
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 142 bits (344), Expect = 1e-33
Identities = 70/108 (64%), Positives = 84/108 (77%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTL 127
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 142 bits (344), Expect = 1e-33
Identities = 70/108 (64%), Positives = 84/108 (77%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ V+KG HG + +KIR S F+RPKT R P+YPRK+ P+RN++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E AMKKI+DNNTLVF V ANKH IK AVKKL DI+ AKVNTL
Sbjct: 80 PLTTEFAMKKIKDNNTLVFTVDVKANKHQIKQAVKKLCDIDGAKVNTL 127
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 127 bits (307), Expect = 3e-29
Identities = 60/108 (55%), Positives = 79/108 (73%)
Frame = +1
Query: 343 KALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKF 522
KALKA++ +KG H +K R S+ F+RPKT R P+YP KS P+RN++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
PLT+E+A+K+ E+NNTL+F V ANKH IK AVKKLYD +VA+V TL
Sbjct: 80 PLTTESAVKRTEENNTLLFTVDVKANKHQIKQAVKKLYDGDVAEVTTL 127
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 118 bits (283), Expect = 3e-26
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = +1
Query: 412 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 591
S+ FRRPKT R P+YP+KS P+RN++ Y IIKFPLT+E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKFPLTTESAVKKIEENNTLVFTVDV 61
Query: 592 SANKHHIKAAVKKLYDINVAKVNTL 666
ANKH I+ AVKKLYD +VAKV TL
Sbjct: 62 KANKHQIRQAVKKLYDSDVAKVTTL 86
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 117 bits (282), Expect = 3e-26
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 412 SVHFRRPKTFEPPRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDNNTLVFIVHT 591
S+ FRRPKT R P+YPRKS P+RN++ Y IIKFPL +E+A+KKIE+NNTLVF V
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKFPLATESAVKKIEENNTLVFTVDV 61
Query: 592 SANKHHIKAAVKKLYDINVAKVNTL 666
ANKH I+ AVKKLYD +VAKV TL
Sbjct: 62 KANKHQIRQAVKKLYDSDVAKVTTL 86
>BC060042-1|AAH60042.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +1
Query: 544 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
MKK EDNN LVF V+ ANKH KKLYD +VAKVNTL
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTL 36
>BC017930-1|AAH17930.1| 81|Homo sapiens LOC649946 protein protein.
Length = 81
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +1
Query: 544 MKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTL 666
MKK EDNN LVF V+ ANKH KKLYD +VAKVNTL
Sbjct: 1 MKKTEDNNALVFTVNVKANKHQ-----KKLYDTDVAKVNTL 36
>AL844851-8|CAM25789.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL844851-6|CAI18575.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL669813-9|CAM24949.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL669813-7|CAI17628.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL645939-8|CAM25440.1| 123|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 123
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>AL645939-6|CAI18086.2| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>AL022723-13|CAI20359.1| 442|Homo sapiens major histocompatibility
complex, class I, F protein.
Length = 442
Score = 50.8 bits (116), Expect = 4e-06
Identities = 33/71 (46%), Positives = 40/71 (56%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V GNLM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BX005428-8|CAM26185.1| 123|Homo sapiens major histocompatibility
complex class I F protein.
Length = 123
Score = 47.2 bits (107), Expect = 5e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 27 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 86
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 87 FLALQSLRFGF 97
>BX005428-6|CAM26183.1| 442|Homo sapiens major histocompatibility
complex class I F protein.
Length = 442
Score = 47.2 bits (107), Expect = 5e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 346 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 405
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 406 FLALQSLRFGF 416
>BC009260-1|AAH09260.2| 460|Homo sapiens HLA-F protein protein.
Length = 460
Score = 47.2 bits (107), Expect = 5e-05
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRIFRTLFPCSPFTTF 363
A S V G LM+ S FLLG F GYLGCL +VLG RK ++ I L+ + F T
Sbjct: 364 AYSVVSGLLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKVGDMWILFFLWLWTSFNTA 423
Query: 362 L*ALSALVTGF 330
AL +L GF
Sbjct: 424 FLALQSLRFGF 434
>AK125274-1|BAC86108.1| 349|Homo sapiens protein ( Homo sapiens
cDNA FLJ43284 fis, clone LYMPB2000083, highly similar
to HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, ALPHA CHAIN F
PRECURSOR. ).
Length = 349
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/47 (53%), Positives = 28/47 (59%)
Frame = -2
Query: 542 AASDVRGNLMML*ASMRFLLGRDFLGYLGCLGGSNVLGLRKCTELRI 402
A S V GNLM+ S FLLG F GYLGCL +VLG RK L +
Sbjct: 260 AYSVVSGNLMITWWSSLFLLGVLFQGYLGCLRSHSVLGRRKAQLLSV 306
>BC038855-1|AAH38855.1| 392|Homo sapiens TMEM16K protein protein.
Length = 392
Score = 32.3 bits (70), Expect = 1.7
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 448 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIEDN-NTLVFIVHTSANKHHIKAAV 624
P+ YP KSL +R I FPL A+KK+ED T + + H +++A
Sbjct: 69 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLEDTWYTRFALKYQPIENHRLESAY 128
Query: 625 KKLYDINVAKVNTLH 669
+ + V N L+
Sbjct: 129 QNHLILKVLVFNFLN 143
>EF041819-1|ABL09300.1| 782|Homo sapiens several ankyrin repeat
protein transcript variant 2 protein.
Length = 782
Score = 30.3 bits (65), Expect = 6.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 660
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 507 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 556
>DQ508815-1|ABF60230.1| 593|Homo sapiens SARP protein.
Length = 593
Score = 30.3 bits (65), Expect = 6.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 660
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 334 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 383
>AK095193-1|BAC04496.1| 389|Homo sapiens protein ( Homo sapiens
cDNA FLJ37874 fis, clone BRSSN2018731, weakly similar to
ANKYRIN 1. ).
Length = 389
Score = 30.3 bits (65), Expect = 6.7
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 508 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVN 660
NI++F +E K +ED TL F H +A K + +KKL + V +N
Sbjct: 215 NILQFIQGAEYEGKDLEDQETLAFPGHVAAFKGDL-GMLKKLVEDGVININ 264
>AY705392-1|AAU10527.1| 921|Homo sapiens calcium/calmodulin-dependent
serine protein kinase protein.
Length = 921
Score = 29.9 bits (64), Expect = 8.9
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 346 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKF 522
A K + V+ G HG R I+N++ + P F P H P PKR+ + N +
Sbjct: 731 AFKRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRP----PKRDEENGKNY--Y 784
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYD 639
++ + M+ I +N L + H A ++K+++
Sbjct: 785 FVSHDQMMQDISNNEYLEYGSHEDAMYGTKLETIRKIHE 823
>AK001237-1|BAA91573.1| 589|Homo sapiens protein ( Homo sapiens
cDNA FLJ10375 fis, clone NT2RM2001950. ).
Length = 589
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1
Query: 448 PRHPKYPRKSLPKRNRMDAYNIIKFPLTSEAAMKKIED 561
P+ YP KSL +R I FPL A+KK+ED
Sbjct: 76 PQAKLYPGKSLLRRLLTSGIVIQVFPLHDSEALKKLED 113
>AF032119-1|AAB88125.1| 921|Homo sapiens hCASK protein.
Length = 921
Score = 29.9 bits (64), Expect = 8.9
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 346 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFE-PPRHPKYPRKSLPKRNRMDAYNIIKF 522
A K + V+ G HG R I+N++ + P F P H P PKR+ + N +
Sbjct: 731 AFKRKTLVLLGAHGVGRRHIKNTLITKHPDRFAYPIPHTTRP----PKRDEENGKNY--Y 784
Query: 523 PLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYD 639
++ + M+ I +N L + H A ++K+++
Sbjct: 785 FVSHDQMMQDISNNEYLEYGSHEDAMYGTKLETIRKIHE 823
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,129,143
Number of Sequences: 237096
Number of extensions: 1397288
Number of successful extensions: 7166
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 7035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7146
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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