Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0246
(728 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY094837-1|AAM11190.1| 890|Drosophila melanogaster LD45081p pro... 109 4e-24
AE014296-3300|AAF49051.1| 890|Drosophila melanogaster CG17149-P... 109 4e-24
AE014296-3299|AAF49052.1| 890|Drosophila melanogaster CG17149-P... 109 4e-24
AY075271-1|AAL68138.2| 480|Drosophila melanogaster AT29464p pro... 51 1e-06
AE014296-1549|AAF50345.1| 476|Drosophila melanogaster CG5653-PA... 51 1e-06
BT024298-1|ABC86360.1| 495|Drosophila melanogaster IP12451p pro... 50 4e-06
AY069611-1|AAL39756.1| 583|Drosophila melanogaster LD37279p pro... 50 4e-06
AE014297-780|AAF54264.1| 583|Drosophila melanogaster CG8032-PA ... 50 4e-06
AE014296-2952|AAF49309.1| 479|Drosophila melanogaster CG6034-PA... 50 4e-06
BT022232-1|AAY54648.1| 363|Drosophila melanogaster IP12466p pro... 46 7e-05
AE014296-2951|AAF49310.2| 486|Drosophila melanogaster CG7460-PB... 46 7e-05
AF091328-1|AAC67581.1| 504|Drosophila melanogaster Cs protein p... 36 0.056
AY052001-1|AAK93425.1| 509|Drosophila melanogaster LD46713p pro... 36 0.075
AE013599-1224|AAF58708.1| 509|Drosophila melanogaster CG7737-PA... 36 0.075
AY058445-1|AAL13674.1| 504|Drosophila melanogaster GH22841p pro... 35 0.099
AE014134-3042|AAF53761.2| 504|Drosophila melanogaster CG10561-P... 35 0.099
>AY094837-1|AAM11190.1| 890|Drosophila melanogaster LD45081p
protein.
Length = 890
Score = 109 bits (262), Expect = 4e-24
Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 5/76 (6%)
Frame = +3
Query: 3 FARGSYSFVAVGSSGTDYDLLAAPI--PGT---DGENRLFFAGEHTMRNYPATVHGAFLS 167
+ARGSYS+V+VGSSG+DYDLLAAP+ P + +G RLFFAGEHT+RNYPATVHGA+LS
Sbjct: 757 WARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLS 816
Query: 168 GLREAGRLADMLLPLP 215
GLREAGR+AD L P
Sbjct: 817 GLREAGRIADYYLGYP 832
>AE014296-3300|AAF49051.1| 890|Drosophila melanogaster CG17149-PB,
isoform B protein.
Length = 890
Score = 109 bits (262), Expect = 4e-24
Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 5/76 (6%)
Frame = +3
Query: 3 FARGSYSFVAVGSSGTDYDLLAAPI--PGT---DGENRLFFAGEHTMRNYPATVHGAFLS 167
+ARGSYS+V+VGSSG+DYDLLAAP+ P + +G RLFFAGEHT+RNYPATVHGA+LS
Sbjct: 757 WARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLS 816
Query: 168 GLREAGRLADMLLPLP 215
GLREAGR+AD L P
Sbjct: 817 GLREAGRIADYYLGYP 832
>AE014296-3299|AAF49052.1| 890|Drosophila melanogaster CG17149-PA,
isoform A protein.
Length = 890
Score = 109 bits (262), Expect = 4e-24
Identities = 54/76 (71%), Positives = 64/76 (84%), Gaps = 5/76 (6%)
Frame = +3
Query: 3 FARGSYSFVAVGSSGTDYDLLAAPI--PGT---DGENRLFFAGEHTMRNYPATVHGAFLS 167
+ARGSYS+V+VGSSG+DYDLLAAP+ P + +G RLFFAGEHT+RNYPATVHGA+LS
Sbjct: 757 WARGSYSYVSVGSSGSDYDLLAAPVIPPSSKDAEGLPRLFFAGEHTIRNYPATVHGAYLS 816
Query: 168 GLREAGRLADMLLPLP 215
GLREAGR+AD L P
Sbjct: 817 GLREAGRIADYYLGYP 832
>AY075271-1|AAL68138.2| 480|Drosophila melanogaster AT29464p
protein.
Length = 480
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 9 RGSYSF--VAVGSSGTDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREA 182
RGS+S+ V T L +P+ G DG L FAGE + RN+ +TVHGA +G REA
Sbjct: 407 RGSWSYRGVMADERNTGPWDLESPVLGEDGHLGLLFAGEASSRNHFSTVHGAVEAGYREA 466
Query: 183 GRLAD 197
RL D
Sbjct: 467 DRLID 471
>AE014296-1549|AAF50345.1| 476|Drosophila melanogaster CG5653-PA
protein.
Length = 476
Score = 51.2 bits (117), Expect = 1e-06
Identities = 30/65 (46%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 9 RGSYSF--VAVGSSGTDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREA 182
RGS+S+ V T L +P+ G DG L FAGE + RN+ +TVHGA +G REA
Sbjct: 403 RGSWSYRGVMADERNTGPWDLESPVLGEDGHLGLLFAGEASSRNHFSTVHGAVEAGYREA 462
Query: 183 GRLAD 197
RL D
Sbjct: 463 DRLID 467
>BT024298-1|ABC86360.1| 495|Drosophila melanogaster IP12451p
protein.
Length = 495
Score = 49.6 bits (113), Expect = 4e-06
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 RGSYSFVAVGSSG--TDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREA 182
RGSYS+ + + T LA+P+ G R+ FAGE + RN+ +TVHGA SG REA
Sbjct: 423 RGSYSYYSTYADELRTGRTDLASPLVDVTGRPRIQFAGEASSRNHFSTVHGAIESGWREA 482
Query: 183 GRL 191
RL
Sbjct: 483 ERL 485
>AY069611-1|AAL39756.1| 583|Drosophila melanogaster LD37279p
protein.
Length = 583
Score = 49.6 bits (113), Expect = 4e-06
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 3 FARGSYSFVAVGSSGTDYDLLAAPIPGTDGENR--LFFAGEHTMRNYPATVHGAFLSGLR 176
F G+Y+ + VG++ D + LA P+ T + + FAGEHT ++ +TVHGA+LSG
Sbjct: 491 FTGGAYTSIPVGATQEDIENLAQPLYATPQAMKPAIVFAGEHTHSSFYSTVHGAYLSGRT 550
Query: 177 EAGRL 191
A L
Sbjct: 551 AAQHL 555
>AE014297-780|AAF54264.1| 583|Drosophila melanogaster CG8032-PA
protein.
Length = 583
Score = 49.6 bits (113), Expect = 4e-06
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +3
Query: 3 FARGSYSFVAVGSSGTDYDLLAAPIPGTDGENR--LFFAGEHTMRNYPATVHGAFLSGLR 176
F G+Y+ + VG++ D + LA P+ T + + FAGEHT ++ +TVHGA+LSG
Sbjct: 491 FTGGAYTSIPVGATQEDIENLAQPLYATPQAMKPAIVFAGEHTHSSFYSTVHGAYLSGRT 550
Query: 177 EAGRL 191
A L
Sbjct: 551 AAQHL 555
>AE014296-2952|AAF49309.1| 479|Drosophila melanogaster CG6034-PA
protein.
Length = 479
Score = 49.6 bits (113), Expect = 4e-06
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 RGSYSFVAVGSSG--TDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREA 182
RGSYS+ + + T LA+P+ G R+ FAGE + RN+ +TVHGA SG REA
Sbjct: 407 RGSYSYYSTYADELRTGRTDLASPLVDVTGRPRIQFAGEASSRNHFSTVHGAIESGWREA 466
Query: 183 GRL 191
RL
Sbjct: 467 ERL 469
>BT022232-1|AAY54648.1| 363|Drosophila melanogaster IP12466p
protein.
Length = 363
Score = 45.6 bits (103), Expect = 7e-05
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 RGSYSFVAVGSSG--TDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREA 182
RGSY+F + + T L AP+ G RL FAGE T +++ +TVHGA +G REA
Sbjct: 290 RGSYTFRSTYTDALRTGAWDLEAPLQDVCGRPRLQFAGESTHKHFYSTVHGAVETGWREA 349
Query: 183 GRL 191
RL
Sbjct: 350 ERL 352
>AE014296-2951|AAF49310.2| 486|Drosophila melanogaster CG7460-PB
protein.
Length = 486
Score = 45.6 bits (103), Expect = 7e-05
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +3
Query: 9 RGSYSFVAVGSSG--TDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREA 182
RGSY+F + + T L AP+ G RL FAGE T +++ +TVHGA +G REA
Sbjct: 413 RGSYTFRSTYTDALRTGAWDLEAPLQDVCGRPRLQFAGESTHKHFYSTVHGAVETGWREA 472
Query: 183 GRL 191
RL
Sbjct: 473 ERL 475
>AF091328-1|AAC67581.1| 504|Drosophila melanogaster Cs protein
protein.
Length = 504
Score = 35.9 bits (79), Expect = 0.056
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 12 GSYSFVAVGSSGTDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREAGRL 191
G + + SS D LAAP+ + L FAG+ T T+ A SG+REA R+
Sbjct: 436 GGRPYFSTNSSARDVQRLAAPLD--EKSPGLLFAGDATSLRSFGTIDAARSSGIREAQRI 493
Query: 192 ADMLL 206
D L
Sbjct: 494 IDYYL 498
>AY052001-1|AAK93425.1| 509|Drosophila melanogaster LD46713p
protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.075
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 108 FAGEHTMRNYPATVHGAFLSGLREAGRLA 194
FAGE + +Y +TVHGA +G REA RLA
Sbjct: 465 FAGEASSEHYYSTVHGAVEAGWREARRLA 493
>AE013599-1224|AAF58708.1| 509|Drosophila melanogaster CG7737-PA
protein.
Length = 509
Score = 35.5 bits (78), Expect = 0.075
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +3
Query: 108 FAGEHTMRNYPATVHGAFLSGLREAGRLA 194
FAGE + +Y +TVHGA +G REA RLA
Sbjct: 465 FAGEASSEHYYSTVHGAVEAGWREARRLA 493
>AY058445-1|AAL13674.1| 504|Drosophila melanogaster GH22841p
protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.099
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 12 GSYSFVAVGSSGTDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREAGRL 191
G + + SS D LAAP+ + L FAG+ T T+ A SG+REA R+
Sbjct: 436 GGRPYFSTNSSARDVQRLAAPLG--EKSPGLLFAGDATSLRGFGTIDAARSSGIREAQRI 493
Query: 192 ADMLL 206
D L
Sbjct: 494 IDYYL 498
>AE014134-3042|AAF53761.2| 504|Drosophila melanogaster CG10561-PA
protein.
Length = 504
Score = 35.1 bits (77), Expect = 0.099
Identities = 23/65 (35%), Positives = 31/65 (47%)
Frame = +3
Query: 12 GSYSFVAVGSSGTDYDLLAAPIPGTDGENRLFFAGEHTMRNYPATVHGAFLSGLREAGRL 191
G + + SS D LAAP+ + L FAG+ T T+ A SG+REA R+
Sbjct: 436 GGRPYFSTNSSARDVQRLAAPLG--EKSPGLLFAGDATSLRGFGTIDAARSSGIREAQRI 493
Query: 192 ADMLL 206
D L
Sbjct: 494 IDYYL 498
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,628,875
Number of Sequences: 53049
Number of extensions: 642500
Number of successful extensions: 1264
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -