Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0242
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   0.99 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   0.99 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   0.99 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.2  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.2  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 533 YHIHTSPSHMHLSPLYASHIHTT 465
           +H    P   H +PLYASH+  T
Sbjct: 210 FHGAFEPFVGHYAPLYASHLDQT 232


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 533 YHIHTSPSHMHLSPLYASHIHTT 465
           +H    P   H +PLYASH+  T
Sbjct: 211 FHGAFEPFVGHYAPLYASHLDQT 233


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 533 YHIHTSPSHMHLSPLYASHIHTT 465
           +H    P   H +PLYASH+  T
Sbjct: 211 FHGAFEPFVGHYAPLYASHLDQT 233


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 535 TTISIHLLVTCIYLL 491
           T   IHL V C++L+
Sbjct: 774 TGSKIHLFVKCVFLM 788


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 218 YFDFDSVIGTCLAYFNQIYIIF 283
           YF    +   C+ YF   +IIF
Sbjct: 201 YFTLHLLFLPCIYYFYSAFIIF 222


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 382 SCHSTHPSQHSHLCRMHSSFMLYLLLTE 299
           +CH   P+  S LC +    +L L  T+
Sbjct: 66  NCHRMKPALFSVLCEIKEKTVLSLRNTQ 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,011
Number of Sequences: 336
Number of extensions: 2948
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)