Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0241
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    60   8e-11
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.9  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   5.1  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   6.7  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 59.7 bits (138), Expect = 8e-11
 Identities = 26/62 (41%), Positives = 41/62 (66%)
 Frame = +3

Query: 87  NMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 266
           ++ +FE  G+  E+   + +  +T PT +Q  AIP+IL G D++  A+TGSGKT AF LP
Sbjct: 172 HVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLP 231

Query: 267 IL 272
           ++
Sbjct: 232 MI 233


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 183  AIPLILGGGDVLMAAETGSGKTGAFCLPILQIV 281
            AIP + GG  + M    GS   GA  +P + +V
Sbjct: 3193 AIPTVAGGAGLAMVGAGGSTAPGAGGVPGVAVV 3225


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 487 KPLSLMRAYAVSAGLHKRQSWILE 558
           KP++L     V   LH+  +WILE
Sbjct: 630 KPITLSDIEDVDPDLHRSLTWILE 653


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 340 LLSVLCHFSIALTH 381
           LL +LC  S+A+TH
Sbjct: 135 LLPILCSLSVAITH 148


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,731
Number of Sequences: 2352
Number of extensions: 16303
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)