Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0241
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 240 7e-64
U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical p... 116 1e-26
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 61 6e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 59 3e-09
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 58 6e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 58 8e-09
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 56 3e-08
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 56 3e-08
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 56 3e-08
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 55 4e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 55 4e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 53 2e-07
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 53 2e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 52 5e-07
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p... 51 9e-07
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep... 51 9e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 48 5e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 48 6e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 48 6e-06
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 48 8e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 48 8e-06
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 48 8e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 48 8e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 48 8e-06
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 48 8e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 45 4e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 44 8e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 44 8e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 38 0.005
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 38 0.007
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 38 0.007
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 38 0.009
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 38 0.009
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical p... 37 0.015
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 31 0.76
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL009246-3|CAA15837.1| 248|Caenorhabditis elegans Hypothetical ... 30 1.8
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 30 1.8
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 30 1.8
AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical ... 30 1.8
U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore co... 29 2.3
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 29 2.3
AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical ... 28 5.4
AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical... 28 7.1
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 240 bits (587), Expect = 7e-64
Identities = 108/196 (55%), Positives = 141/196 (71%)
Frame = +3
Query: 90 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI 269
MTAFEEFG++PE+ A+ ++WTLPT VQ+EAIP ILGG D L+AAETGSGKTGAF LPI
Sbjct: 1 MTAFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPI 60
Query: 270 LQIVWETLKDMQEGKTGKVITQTSSECTMSFFDRTDALAVTPDGLRCQSRNQKDWHGCRA 449
QIVWE K ++ + + S E ++ DR +L + GL C+SR K+WHG RA
Sbjct: 61 AQIVWERRKSAEKSQNSGQKPENSREFQLNREDRDVSLQIDKTGLNCESRVAKEWHGARA 120
Query: 450 TKGVHTKGAYYFEATVTDEGLCRVGWSTQAAKLDLGTDRLGYGFGGTGKKSNCKQFDDYG 629
T G++ G YY+E TVT +GLCRVGW+T + L +GTD +G+GGTGKKS K+FDDYG
Sbjct: 121 TAGLYGNGKYYYEVTVTRDGLCRVGWATLSGSLKIGTDFESFGYGGTGKKSFGKKFDDYG 180
Query: 630 EAYGMNDVIGCFLNLN 677
++ NDV+GCFL+L+
Sbjct: 181 TSFTTNDVLGCFLDLD 196
>U53150-10|AAA96130.3| 433|Caenorhabditis elegans Hypothetical
protein F20A1.9 protein.
Length = 433
Score = 116 bits (280), Expect = 1e-26
Identities = 49/100 (49%), Positives = 68/100 (68%)
Frame = +3
Query: 381 LAVTPDGLRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWSTQAAKLDLGT 560
L + GL C+S +K W G R T G++ G YY+E T+T +GLCRVGW+T L++G
Sbjct: 20 LEIDETGLACKSEVKKRWLGARGTAGLYGNGKYYYEVTITSKGLCRVGWATLGGSLNIGK 79
Query: 561 DRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGCFLNLNS 680
+G+GGTG KS K+FDDYG + +NDVIGC+L+L+S
Sbjct: 80 GLDSFGYGGTGMKSTHKKFDDYGLPFTLNDVIGCYLDLDS 119
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/60 (46%), Positives = 38/60 (63%)
Frame = +3
Query: 96 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 275
+F E GV + A + + W P+ +Q A+P L G DV+ AETGSGKTGAF +P+LQ
Sbjct: 45 SFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQ 104
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/64 (48%), Positives = 43/64 (67%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
+EE G E+ +A++E+ + PT +Q +AIP+ L DV+ AETGSGKT AF LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLL-- 360
Query: 279 VWET 290
VW T
Sbjct: 361 VWIT 364
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 59.3 bits (137), Expect = 3e-09
Identities = 33/82 (40%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +3
Query: 87 NMTAFEEFGVLP-EIGKAIEEMDWTLPTDVQAEAIPL-ILGGGDVLMAAETGSGKTGAFC 260
+++A+++F LP E+ +AIE+M ++ PT++Q+ +P + DVL AAETGSGKT AF
Sbjct: 152 DISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFG 211
Query: 261 LPILQIVWETLKDMQEGKTGKV 326
+P++ + E+ D QE ++ +V
Sbjct: 212 IPLVARLLESSDDSQETESTEV 233
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 58.8 bits (136), Expect = 3e-09
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
FE+F + + +++ D+T PT++Q + I L G DV+ AA+TGSGKT A +P+L+
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 279 VWETLKDMQEGKTGKVITQTSSECTMSFFDRTDAL 383
+W G G +I + E + F +A+
Sbjct: 138 LWRAKWSPDYG-LGALIISPTRELALQTFSTINAV 171
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
FE+F + ++ I E W P+ +Q +I + L G D+L A+ G+GKTGA+C+P+++
Sbjct: 45 FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEK 104
Query: 279 VWETLKDMQE---GKTGKVITQTSSEC 350
+ LK +Q T ++ QTS C
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQIC 131
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 57.6 bits (133), Expect = 8e-09
Identities = 30/78 (38%), Positives = 49/78 (62%)
Frame = +3
Query: 132 KAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDMQEG 311
KA++ + +T T++QA++I +L G DVL +A+TGSGKT AF LP ++++ L Q
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELL-HKLNWKQHN 139
Query: 312 KTGKVITQTSSECTMSFF 365
TG +I + E +M +
Sbjct: 140 GTGVIIVSPTRELSMQTY 157
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Frame = +3
Query: 111 GVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWET 290
GV ++ +++ +++ PT +QA+AIP I+ G DV+ A+TGSGKT AF LP+ + + +
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 291 LKDMQEGKTG-KVITQTSSECTMSFFDRTDALAVTPDGLR 407
+++EG VI + E M + + A P GL+
Sbjct: 370 -PELEEGDGPIAVILAPTRELAMQTYKEANKFA-KPLGLK 407
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 275
+++ G+ + KAIE+ + PT +Q + IP I+ G DV+ + TGSGKT AF +P+LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 56.0 bits (129), Expect = 2e-08
Identities = 25/59 (42%), Positives = 39/59 (66%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 275
+++ G+ + KAIE+ + PT +Q + IP I+ G DV+ + TGSGKT AF +P+LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQ 84
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
F E G P + + + ++ PT VQ +IP +L D++ A+TGSGKT AF LPI+Q
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 279 VWETLKDM 302
+ DM
Sbjct: 201 ILAGGPDM 208
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
F E G P + + + ++ PT VQ +IP +L D++ A+TGSGKT AF LPI+Q
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 279 VWETLKDM 302
+ DM
Sbjct: 185 ILAGGPDM 192
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
F E G P + + + ++ PT VQ +IP +L D++ A+TGSGKT AF LPI+Q
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 279 VWETLKDM 302
+ DM
Sbjct: 182 ILAGGPDM 189
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 87 NMTA--FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFC 260
NMT F + GV I + ++ M T VQA IP IL G D+L A TG+GKT AF
Sbjct: 85 NMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFA 144
Query: 261 LPILQ 275
+PILQ
Sbjct: 145 IPILQ 149
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 55.2 bits (127), Expect = 4e-08
Identities = 31/65 (47%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +3
Query: 87 NMTA--FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFC 260
NMT F + GV I + ++ M T VQA IP IL G D+L A TG+GKT AF
Sbjct: 85 NMTTKKFSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFA 144
Query: 261 LPILQ 275
+PILQ
Sbjct: 145 IPILQ 149
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ- 275
F +FG+ I K+I E+ W VQ I L L +++ A TGSGKTGAF +P++Q
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 276 -IVWETLKDMQEGKTGKVITQTSSECTMSF 362
I D G + +I T T +
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPTKELITQIY 180
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 96 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL- 272
+F + + + + +E +T T +Q +PL+ G D+L A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 273 QIVWETLKDMQEGKTG 320
+++ E KD+ G G
Sbjct: 359 RLILE--KDLNYGAEG 372
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 53.2 bits (122), Expect = 2e-07
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 96 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL- 272
+F + + + + +E +T T +Q +PL+ G D+L A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 273 QIVWETLKDMQEGKTG 320
+++ E KD+ G G
Sbjct: 359 RLILE--KDLNYGAEG 372
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 96 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 275
+FE+ + +I KA ++ PT +Q IP+ L G D+ A TG+GKT AF LPIL+
Sbjct: 149 SFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILE 208
>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
protein 68 protein.
Length = 5079
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +3
Query: 402 LRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWST--QAAKLDLGTDRLGY 575
LR + N + + AT V G +YFE + G ++GW ++ LG D Y
Sbjct: 949 LRARKDNTRTYRA-EATYAV-CGGKWYFEFEILTAGYMKIGWMDIGSTPEIQLGADDRSY 1006
Query: 576 GFGG-TGKKSNCKQFDDYGEAYGMNDVIGCFLNLN 677
F G G+K + + + YG+ + + DV+GCFL+LN
Sbjct: 1007 AFDGYLGRKWH-QGAETYGKEWKIGDVVGCFLDLN 1040
>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
protein.
Length = 5071
Score = 50.8 bits (116), Expect = 9e-07
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = +3
Query: 402 LRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWST--QAAKLDLGTDRLGY 575
LR + N + + AT V G +YFE + G ++GW ++ LG D Y
Sbjct: 1070 LRARKDNTRTYRA-EATYAV-CGGKWYFEFEILTAGYMKIGWMDIGSTPEIQLGADDRSY 1127
Query: 576 GFGG-TGKKSNCKQFDDYGEAYGMNDVIGCFLNLN 677
F G G+K + + + YG+ + + DV+GCFL+LN
Sbjct: 1128 AFDGYLGRKWH-QGAETYGKEWKIGDVVGCFLDLN 1161
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +3
Query: 96 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP-IL 272
+F F + +AI + ++ PT +QA AIP L G DVL A+TGSGKT A+ P I+
Sbjct: 266 SFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIV 325
Query: 273 QIVWETLKDMQEGKTGKVITQT 338
I+ + EG ++ T
Sbjct: 326 HIMDQPDLKAGEGPVAVIVVPT 347
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/64 (35%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 NMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLIL--GGGDVLMAAETGSGKTGAFC 260
++++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++G+GKT AF
Sbjct: 207 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 266
Query: 261 LPIL 272
L +L
Sbjct: 267 LTML 270
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/64 (35%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 NMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLIL--GGGDVLMAAETGSGKTGAFC 260
++++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++G+GKT AF
Sbjct: 232 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 291
Query: 261 LPIL 272
L +L
Sbjct: 292 LTML 295
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/64 (35%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Frame = +3
Query: 87 NMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLIL--GGGDVLMAAETGSGKTGAFC 260
++++F E + PE+ KA++ M++ PT +Q A+PL+L +++ A++G+GKT AF
Sbjct: 616 SISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFV 675
Query: 261 LPIL 272
L +L
Sbjct: 676 LTML 679
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/64 (34%), Positives = 38/64 (59%)
Frame = +3
Query: 90 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI 269
++ F + + I + I+ + PT VQ +IP + GG D++ A+TGSGKT AF +P+
Sbjct: 165 ISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPL 224
Query: 270 LQIV 281
+ +
Sbjct: 225 VNAI 228
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +3
Query: 87 NMTAFEEFGVLPE-IGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCL 263
+M +F+ F +LP+ + ++ M PT +Q + I+ G DV+ A TGSGKT AF +
Sbjct: 733 DMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
Query: 264 P-ILQIVWETLKD 299
P +++++ E KD
Sbjct: 793 PFVIKLMEEFEKD 805
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Frame = +3
Query: 87 NMTAFEEFGVLPE-IGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCL 263
+M +F+ F +LP+ + ++ M PT +Q + I+ G DV+ A TGSGKT AF +
Sbjct: 733 DMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLI 792
Query: 264 P-ILQIVWETLKD 299
P +++++ E KD
Sbjct: 793 PFVIKLMEEFEKD 805
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 272
F E + + K + ++ T +Q A+PL+ G D++ A+TGSGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 272
F E + + K + +T T +Q +PLI G D++ A+TGSGKT AF LPI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 272
F E + + K + +T T +Q +PLI G D++ A+TGSGKT AF LPI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 272
F E + + K + ++ T +Q A+PL+ G D++ A+TGSGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 47.6 bits (108), Expect = 8e-06
Identities = 22/58 (37%), Positives = 34/58 (58%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 272
F E + + K + ++ T +Q A+PL+ G D++ A+TGSGKT AF LPI+
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIM 400
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPIL 272
F E + + K + +T T +Q +PLI G D++ A+TGSGKT AF LPI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIM 611
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/61 (37%), Positives = 36/61 (59%)
Frame = +3
Query: 90 MTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI 269
+T++ G+ P I + ++ + + +Q IP +L G DVL AET +GKT AF LPI
Sbjct: 380 LTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPI 439
Query: 270 L 272
+
Sbjct: 440 I 440
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/69 (30%), Positives = 40/69 (57%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
F++ G+ ++ + I + P+ +Q AIP IL DV+ A++G+GKT F + +LQ
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 279 VWETLKDMQ 305
+ +++ Q
Sbjct: 88 LDTQVRETQ 96
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/69 (28%), Positives = 40/69 (57%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
F++ G+ ++ + I + P+ +Q A+P IL DV+ A++G+GKT F + +LQ
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 279 VWETLKDMQ 305
+ +++ Q
Sbjct: 88 LDTQVRETQ 96
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +3
Query: 162 PTDVQAEAIPL-ILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDMQEGKTGKV 326
PT++Q+ +P + DVL AAETGSGKT AF +P++ + E+ D QE ++ +V
Sbjct: 11 PTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEV 66
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +3
Query: 90 MTAFEE-FGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP 266
+ +FE+ FG I I + + P+ +Q++ PL+L G D + ++TGSGKT AF LP
Sbjct: 82 VNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLP 141
Query: 267 IL 272
L
Sbjct: 142 AL 143
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 44.4 bits (100), Expect = 8e-05
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +3
Query: 162 PTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDM----QEGKTGKVI 329
PT +Q + IP+ L G D++ A TGSGKT F LP++ E + EG G +I
Sbjct: 213 PTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272
Query: 330 TQTSSECTMSFFD 368
S E FD
Sbjct: 273 V-PSRELARQIFD 284
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 99 FEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQI 278
F + + P + + E P+ +Q ++IP + +VL +A TGSGKT AF LP++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 279 VWE 287
+ E
Sbjct: 188 ILE 190
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +3
Query: 162 PTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLP-ILQIVWETLKDMQEGKTGKVITQT 338
PT +Q+ + P+ + G D++ A+TGSGKT AF LP ++ I + + EG V+ T
Sbjct: 152 PTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPT 211
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 38.3 bits (85), Expect = 0.005
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Frame = +3
Query: 366 DRTDALAVTPDGLRCQSRNQKDWHGCRATKGVHTKGAYYFEATVTDEGLCRVGWSTQAAK 545
D ++ L + PDGL + + + R T V G +Y+EATV G+ ++G +T+ ++
Sbjct: 360 DVSEYLKIGPDGLEARC-DVSSFESVRCTFEV-MDGVWYYEATVLTSGVMQIGLATKRSR 417
Query: 546 LDLGTDRLGYGFGGTGKK---SNCKQFDDYG--------EAYGMNDVIGCFLNL 674
+ GYG G C+Q Y E + DVIG LN+
Sbjct: 418 F---LNHEGYGIGDDASSVAYDGCRQLVWYNAKSHKHEHENWQPGDVIGVLLNI 468
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/113 (28%), Positives = 55/113 (48%)
Frame = +3
Query: 69 NSIIL*NMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKT 248
+SI + + FE + + + ++ + P+ VQA AIP+ L G D+L+ A++G+GKT
Sbjct: 14 SSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKT 73
Query: 249 GAFCLPILQIVWETLKDMQEGKTGKVITQTSSECTMSFFDRTDALAVTPDGLR 407
F + + E L D + KVI + E ++ + V P G R
Sbjct: 74 LVFSV----LAVENL-DSRSSHIQKVIVTPTREISVQI--KETVRKVAPTGAR 119
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 37.9 bits (84), Expect = 0.007
Identities = 32/113 (28%), Positives = 55/113 (48%)
Frame = +3
Query: 69 NSIIL*NMTAFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKT 248
+SI + + FE + + + ++ + P+ VQA AIP+ L G D+L+ A++G+GKT
Sbjct: 14 SSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKT 73
Query: 249 GAFCLPILQIVWETLKDMQEGKTGKVITQTSSECTMSFFDRTDALAVTPDGLR 407
F + + E L D + KVI + E ++ + V P G R
Sbjct: 74 LVFSV----LAVENL-DSRSSHIQKVIVTPTREISVQI--KETVRKVAPTGAR 119
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 96 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 275
+F++ + E+ + I + P+ +Q AI G DV+ A++G+GKT F + ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 96 AFEEFGVLPEIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 275
+F++ + E+ + I + P+ +Q AI G DV+ A++G+GKT F + ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +3
Query: 165 TDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQIVWETLKDMQEGKTGKVITQTSS 344
TDVQ + +L DV++ + TGSGKT AF LP+++++ +Q G +I S
Sbjct: 33 TDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNA--KLQPADIGALILSPSR 90
Query: 345 E 347
E
Sbjct: 91 E 91
>Z95559-15|CAB63361.1| 917|Caenorhabditis elegans Hypothetical
protein Y41E3.11 protein.
Length = 917
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +3
Query: 495 VTDEGLCRVGWS-TQAAKLDLGTDRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGCFLN 671
+ D G R+G+S A L LG + +GK++ F D+G+ + + DV+ C +
Sbjct: 271 MADGGDVRIGFSLASTASLILGESPGSWCISASGKRAANNHFSDFGKLFDIGDVVTCIFD 330
Query: 672 LN 677
L+
Sbjct: 331 LS 332
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 531 TQAAKLDLGTDRLGYGFGGTGKKSNCKQFDDYGEAYGMNDVIGC 662
T LD DRLGY G + + FD + EA G + +I C
Sbjct: 74 TMIEMLDRLGDRLGYDIDGRDSLDDDELFDTFKEASGFSPIIYC 117
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 210 DVLMAAETGSGKTGAFCLPILQIV 281
DV +AA TGSGKT + LP+L V
Sbjct: 158 DVAIAAPTGSGKTICYVLPVLAAV 181
>Z82096-3|CAD45613.1| 548|Caenorhabditis elegans Hypothetical
protein ZK909.2c protein.
Length = 548
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = -1
Query: 406 RNPSGVTASASVRSKNDIVHSEDVCVITLPVFPSCISFKVSQTICNIGKQNAPVFPL--- 236
RN + + V+ + ED+C +P S V + + G Q AP L
Sbjct: 105 RNTTSSITTGLVKKRRSSSSPEDICREKIPHILLKTSSGVVVPLASRG-QRAPAITLQNP 163
Query: 235 PVSAAISTSPPP 200
P SAAI T PPP
Sbjct: 164 PPSAAIRTVPPP 175
>AL009246-3|CAA15837.1| 248|Caenorhabditis elegans Hypothetical
protein C47F8.4 protein.
Length = 248
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1
Query: 337 RLLSVLCHFSIALTHWLLLLTGYGVNPEIKK 429
RL + L H + HWL++ GYG+ PE+++
Sbjct: 20 RLANTLAH--VENLHWLVVEDGYGIVPEVRQ 48
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -1
Query: 271 NIGKQNAPVFPLPVSAAISTSPPPKIRGIASAWTSVGRVQSISSIALPISGSTPNSSKAV 92
N + N P P P A+ P P AS ++ S S P S S+ S K
Sbjct: 65 NNDENNKPFDPPPTFVAVKKKPTPLATSSASTTAPAAKIASASDSKKPASSSSTISVKPT 124
Query: 91 I 89
+
Sbjct: 125 V 125
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = -1
Query: 271 NIGKQNAPVFPLPVSAAISTSPPPKIRGIASAWTSVGRVQSISSIALPISGSTPNSSKAV 92
N + N P P P A+ P P AS ++ S S P S S+ S K
Sbjct: 93 NNDENNKPFDPPPTFVAVKKKPTPLATSSASTTAPAAKIASASDSKKPASSSSTISVKPT 152
Query: 91 I 89
+
Sbjct: 153 V 153
>AF067220-1|AAK84500.1| 1014|Caenorhabditis elegans Hypothetical
protein C33E10.6 protein.
Length = 1014
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 594 KKSNCKQFDDYGEAYGMNDVI 656
KK NCK DY + Y +NDV+
Sbjct: 505 KKMNCKNIGDYTDIYMLNDVL 525
>U80033-3|AAC48199.1| 1847|Caenorhabditis elegans Nuclear pore complex
protein protein12 protein.
Length = 1847
Score = 29.5 bits (63), Expect = 2.3
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = -1
Query: 415 D*HRNPSGVTASASVRSKNDIVHSEDVCVITLPVFPSCI-SFKVSQTI-CNIGKQNAPVF 242
D H +G SA++ +N V+S D + +PV S + S V TI +N+P+
Sbjct: 1250 DGHLITNGKEGSAAITVRN--VNSPDNETVLIPVTVSRVASLDVHPTIELKSAFENSPLI 1307
Query: 241 PLPVSAAISTSPPPK-IRG--IASAWTSV 164
LPV A I + P+ RG +A+A S+
Sbjct: 1308 HLPVGAQIQLNVVPRDARGRRLAAASNSI 1336
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +3
Query: 123 EIGKAIEEMDWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPILQ 275
E+ + I + P+ +Q A+ G DV + ++ GSGKT + ILQ
Sbjct: 6 ELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQ 56
>AC024842-7|AAF59620.1| 457|Caenorhabditis elegans Hypothetical
protein Y59H11AR.4 protein.
Length = 457
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -2
Query: 471 LSYEHLWLPYTRASLFDFWI 412
LSY L+L YT SLF FWI
Sbjct: 232 LSYIALFLLYTPVSLFGFWI 251
>AL021497-17|CAD56613.1| 138|Caenorhabditis elegans Hypothetical
protein Y51A2D.20 protein.
Length = 138
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 250 PVFPLPVSAAISTSPPPKIRGIASAWTSVGRVQSISSIALPISGSTPNSS 101
P+ P+++++ + PPP + A +++ SS PI+ STPNSS
Sbjct: 30 PIRNSPMTSSLRSRPPPPPYNRSPAH----KIEQNSSFFEPIAHSTPNSS 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,367,037
Number of Sequences: 27780
Number of extensions: 365674
Number of successful extensions: 1099
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1096
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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