Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0238
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.3  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    24   4.1  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   7.2  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   9.5  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 11  RDTTPRSGGVPSHAIPIGSPGLQLVPCPG 97
           RD  P + G+P      G PGL +V  PG
Sbjct: 79  RDGMPGAPGLPGSKGVKGDPGLSMVGPPG 107


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -1

Query: 214 YDYTVHIRFLFDYRHGSCALKHCLDVQAEEFGLK*HRGDPWTG 86
           + Y  +  FLF +  G    +H  D+  E +     RG+ + G
Sbjct: 34  FPYAPNPHFLFGHAKGQAQTRHGADIHQELYRYFKQRGERYGG 76


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +1

Query: 103 LGATSDQTLQLGRPNNALKHNFRDGSQTKSECE 201
           L  T ++ ++L   NNAL  NF + ++ K   E
Sbjct: 102 LEKTENEIVELSENNNALLQNFMELTELKHVLE 134


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = +1

Query: 31  WWGALTCDPYRIPWSSTGP 87
           WW      P+R PW    P
Sbjct: 83  WWSVPGIPPFRPPWHPRPP 101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,930
Number of Sequences: 2352
Number of extensions: 14453
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)