Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0238
(718 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 25 0.94
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.2
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 23 2.2
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 23 2.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.2
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.2
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.2
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 2.9
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 23 2.9
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 2.9
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.9
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 2.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 2.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 2.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 2.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 2.9
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 23 2.9
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 2.9
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 2.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.8
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 22 5.0
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 22 5.0
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 22 5.0
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 22 5.0
DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein. 21 8.8
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 24.6 bits (51), Expect = 0.94
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNIEK+GN+
Sbjct: 189 IEEHDTVLVVNIEKSGNE 206
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
+ E D + VNIEK+GN+
Sbjct: 189 IKEHDTVLVVNIEKSGNE 206
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
+ E D + VNIEK+GN+
Sbjct: 189 IKEHDTVLVVNIEKSGNE 206
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
+ E D + VNIEK+GN+
Sbjct: 189 IKEHDTVLVVNIEKSGNE 206
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
+ E D + VNIEK+GN+
Sbjct: 194 IKEHDTVLVVNIEKSGNE 211
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
+ E D + VNIEK+GN+
Sbjct: 189 IKEHDTVLVVNIEKSGNE 206
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
+ E D + VNIEK+GN+
Sbjct: 189 IKEHDTVLVVNIEKSGNE 206
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 178 IEEHDTVLVVNIKKSGNE 195
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 178 IEEHDTVLVVNIKKSGNE 195
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 178 IEEHDTVLVVNIKKSGNE 195
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 2.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNI+K+GN+
Sbjct: 189 IEEHDTVLVVNIKKSGNE 206
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 3.8
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 72 VFNWSPVQGSPRCYFRPNSSAW 137
++NW + CYFR N++ W
Sbjct: 530 IYNWFQ---NTFCYFRRNAATW 548
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNIEK+G +
Sbjct: 178 IEEHDTVLVVNIEKSGKE 195
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNIEK+G +
Sbjct: 189 IEEHDTVLVVNIEKSGKE 206
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNIEK+G +
Sbjct: 189 IEEQDTVLVVNIEKSGKE 206
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -3
Query: 659 VDEGDMIQFVNIEKTGNK 606
++E D + VNIEK+G +
Sbjct: 178 IEEHDTVLVVNIEKSGKE 195
>DQ435330-1|ABD92645.1| 132|Apis mellifera OBP13 protein.
Length = 132
Score = 21.4 bits (43), Expect = 8.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 210 TIRFTFAFCLTTVTEV 163
TI F FAFCL + V
Sbjct: 3 TIIFIFAFCLVGILAV 18
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,829
Number of Sequences: 438
Number of extensions: 3752
Number of successful extensions: 30
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22170330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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