Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0237
(664 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 258 4e-69
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 182 3e-46
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 140 1e-33
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 131 4e-31
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 118 4e-27
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 116 2e-26
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 113 1e-25
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 1e-24
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 108 3e-24
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 5e-24
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 3e-23
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 105 4e-23
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 1e-22
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 101 4e-22
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 101 5e-22
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 101 7e-22
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 98 6e-21
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 95 3e-20
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 93 2e-19
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 92 3e-19
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 92 4e-19
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 62 3e-18
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 85 4e-17
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 83 2e-16
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 82 3e-16
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 81 6e-16
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 79 4e-15
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 77 2e-14
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 76 3e-14
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 7e-14
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 73 2e-13
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 69 3e-12
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 69 5e-12
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 68 8e-12
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 66 2e-11
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 64 1e-10
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 63 2e-10
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 5e-10
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 59 4e-09
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 57 1e-08
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 56 3e-08
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 3e-08
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 55 4e-08
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 54 1e-07
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 53 2e-07
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 52 6e-07
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 51 1e-06
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 48 5e-06
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 48 7e-06
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 47 1e-05
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 45 6e-05
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 44 1e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 43 2e-04
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 42 4e-04
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 41 0.001
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 41 0.001
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 40 0.001
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 40 0.002
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 39 0.004
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 39 0.004
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 38 0.007
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 38 0.007
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 38 0.010
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 37 0.013
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 37 0.017
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 37 0.017
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 36 0.022
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 36 0.029
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.029
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 36 0.039
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 35 0.051
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 35 0.068
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 34 0.090
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 33 0.16
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.21
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 32 0.36
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.48
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 31 0.84
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 31 1.1
SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_11465| Best HMM Match : EGF (HMM E-Value=0.13) 30 1.9
SB_3199| Best HMM Match : 7tm_1 (HMM E-Value=0) 29 3.4
SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 5.9
SB_44764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.8
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 258 bits (631), Expect = 4e-69
Identities = 114/135 (84%), Positives = 127/135 (94%)
Frame = +2
Query: 239 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 418
IWDTAGQERFQSLGVAFYRGADCCVLVFDVT PN+FK+L+SWRDEFLIQASPRDP+NFPF
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 419 VILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEA 598
V+LGNK+DL+NRAVS KR Q WC SKNDIPYFETSAKEA+NVE AFQTIA+NALAQET+
Sbjct: 61 VVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNALAQETDV 120
Query: 599 ELYNEFPDQIKLNAN 643
ELYN+FPDQIKL+ +
Sbjct: 121 ELYNDFPDQIKLSGD 135
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 182 bits (442), Expect = 3e-46
Identities = 83/151 (54%), Positives = 105/151 (69%)
Frame = +2
Query: 104 DSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGV 283
D GVGK+SLMN+FV KF Q TIG +FL K+V +D T+QIWDTAGQERF+SL
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRT 278
Query: 284 AFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNRAVS 463
FYRG+D C+LV+ V +F +L W+ EFL A RD DNFPF++LGNKVD++ RAVS
Sbjct: 279 PFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEGRAVS 338
Query: 464 VKRGQQWCQSKNDIPYFETSAKEAVNVELAF 556
+ WC+ +PYFETSAK++ NV AF
Sbjct: 339 QEEADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 140 bits (338), Expect = 1e-33
Identities = 74/177 (41%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
Frame = +2
Query: 59 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 238
M+S L K++++GDSGVGK+SL+ +F + FSN Y +TIG DF + + VD + + +Q
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQ 60
Query: 239 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 418
IWDTAGQERF++L A+YR A VL++DV TF L W +E S +
Sbjct: 61 IWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEE----VSEYACEGVNT 116
Query: 419 VILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQ 586
+++GNK DL D R V +++ + K DI + ETSAK++ NVE F+T+A A+
Sbjct: 117 ILVGNKCDLIDCRQVGYNTAKEFAE-KLDISFIETSAKDSTNVESVFRTMAAELKAK 172
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 131 bits (317), Expect = 4e-31
Identities = 71/178 (39%), Positives = 104/178 (58%), Gaps = 1/178 (0%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ V +DD V +IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 445
+ SL +YRGA ++V+D+T +TF ++W E QASP N + GNK DL
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASP----NIVIALSGNKADL 138
Query: 446 -DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEF 616
R V + Q + + N + + ETSAK A+NV F I + ++ + EF
Sbjct: 139 ASKRMVEYEDAQSYAED-NGLLFMETSAKTAMNVNDIFLAIGKKGKKKKGKTLNLTEF 195
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 120 bits (289), Expect = 1e-27
Identities = 63/164 (38%), Positives = 100/164 (60%), Gaps = 1/164 (0%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K++ LGD GVGK+SL +F+ F +Y+ TIG DF+TK V++DD V +QIWDTAGQER
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD- 442
F+ L ++ R ++ ++VFD+T +F+S+ W + + +I+GNK+D
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDW----VKMVRDERGEKAVIIIVGNKMDE 280
Query: 443 LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARN 574
D R VS ++ + + + Y ETSAK NV+L F ++++
Sbjct: 281 SDRRKVSYDVAEKSAE-RLGLSYVETSAKSGYNVKLLFTKLSKD 323
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 118 bits (284), Expect = 4e-27
Identities = 59/153 (38%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
L K++++GDSGVGK+SL+++F +F + K+TIG +F T+ + V+ +I+ Q+WDTAGQ
Sbjct: 12 LYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQ 71
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 439
ER++++ A+YRGA VLV+D+T TF+ +E W E A P +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADP----TIVVMLVGNKC 127
Query: 440 DLDN-RAVSVKRGQQWCQSKNDIPYFETSAKEA 535
DL + RAV+ +++ ++ + + E SA +A
Sbjct: 128 DLKHLRAVASDDAKKY-GDEHGLAFIEASALDA 159
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 116 bits (278), Expect = 2e-26
Identities = 62/164 (37%), Positives = 101/164 (61%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
+ KV++LGD VGK+SL+ +F + +F+ Q TIG DF + +D + V +Q+WDTAG+
Sbjct: 10 VFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGE 69
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 439
E++++L +F+RGAD +LVFDV+ +F S+ RD +L + + +++GNK
Sbjct: 70 EKYRALSRSFFRGADGALLVFDVSVKESFDSI---RDYWLHEFHKVSGSDTITILVGNKC 126
Query: 440 DLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
D ++ VS + Q N + + ETSAK+ NV AF+ +AR
Sbjct: 127 DKKDKKVSEEDIQNLSSCYN-LSWLETSAKDNTNVNEAFEAMAR 169
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 113 bits (272), Expect = 1e-25
Identities = 59/167 (35%), Positives = 100/167 (59%), Gaps = 4/167 (2%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
+ KV+ +GDSGVGK+S +++F + ++ + ATIG DF K + V+ + + +Q+WDTAGQ
Sbjct: 896 VFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQ 955
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 439
ERF+S+ ++R AD ++ +DVTA ++F +L+ W ++ + ++LGNK
Sbjct: 956 ERFRSITKQYFRKADGILIFYDVTAESSFTNLKKW----MVSVEEGAEEGVAKMVLGNKT 1011
Query: 440 DL----DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIA 568
DL ++R V G+ ++ D Y ETSAK N++ A +A
Sbjct: 1012 DLAEDEESRVVKTIDGKN-LANQYDALYMETSAKTGNNIQEAMYKLA 1057
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 110 bits (264), Expect = 1e-24
Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Frame = +2
Query: 74 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 253
K KV+++GD GVGKTSL+ +F F + +T+G D T+ + + V +Q WDTA
Sbjct: 9 KYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTA 68
Query: 254 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 433
GQE+F+ + ++YR AD +LVFD+T TF S+ W L+ N V++GN
Sbjct: 69 GQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQW----LMNVQKYTNKNILKVLVGN 124
Query: 434 KVDLD--NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELY 607
K DL +R V+ + + + ++ Y ETSAK NVE+ +A L + + ++
Sbjct: 125 KTDLKGASRKVNTRSAANLAEFE-ELLYLETSAKWDDNVEVLIAELAEQ-LRENAKNRVF 182
Query: 608 NE 613
E
Sbjct: 183 EE 184
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 108 bits (260), Expect = 3e-24
Identities = 56/163 (34%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDDRIVTMQIWDTAGQE 262
++I++GDS VGK+SL+ QF +F T+G DF + + + D + +QIWDTAGQE
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWDTAGQE 74
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
RF+S+ ++YR C++++D+T ++F ++ W E + F+++G+K+D
Sbjct: 75 RFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKE---AKQCVEEAEVVFMLVGHKID 131
Query: 443 LDN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIA 568
++ R VS + G+ + ++ N + + ETSAK N+E AF ++A
Sbjct: 132 KESKRVVSTEEGECFAEAHN-MMFIETSAKVLCNIEEAFISVA 173
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 108 bits (259), Expect = 5e-24
Identities = 64/192 (33%), Positives = 106/192 (55%), Gaps = 22/192 (11%)
Frame = +2
Query: 59 MSSRKKLLLKVIILGDSGVGKTSLMNQFV---------------------NKKFSNQYKA 175
M+ L K++++GDSGVGK+ L+ +F + ++ Y +
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYIS 60
Query: 176 TIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL 355
TIG DF + + +D + + +QIWDTAGQERF+++ ++YRGA ++V+DVT +F ++
Sbjct: 61 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV 120
Query: 356 ESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKE 532
+ W E A +N +++GNK DL + V +++ +S +P+ ETSAK
Sbjct: 121 KQWLQEIDRYAC----ENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLG-VPFLETSAKN 175
Query: 533 AVNVELAFQTIA 568
A NVE AF T+A
Sbjct: 176 ATNVEQAFMTMA 187
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 105 bits (252), Expect = 3e-23
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 2/182 (1%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-VDDRIVTMQIWDTAGQE 262
KV+++GD GK S + ++VN + YK TIG DF K + + + +QIW AGQE
Sbjct: 20 KVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQE 79
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
RF S+ +Y+GAD CV++FD+ T W+ + + P +++GNK D
Sbjct: 80 RFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILVGNKSD 139
Query: 443 LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL-YNEFP 619
L +R V + + C+ + + + E S KE +NV+ + + ++ + E + Y
Sbjct: 140 LPDRPVDKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVKHLMEDGKEGSVPYKPVM 199
Query: 620 DQ 625
DQ
Sbjct: 200 DQ 201
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 105 bits (251), Expect = 4e-23
Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 6/170 (3%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
+ K+++ GD+ VGK+S + + +F + +T+G DF K ++VD + +Q+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 439
ERF+S+ +++R AD +L++DVT +F + W + I+ S P P ++ GNK+
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVE--AIEESCSKP--VPIMLCGNKI 557
Query: 440 DL------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
D+ +N+ V ++ + ETS+KE N+ A +AR
Sbjct: 558 DIRQSAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELAR 607
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 105 bits (251), Expect = 4e-23
Identities = 50/120 (41%), Positives = 77/120 (64%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
LK++I+G+SGVGK+SL+ +F + F ATIG DF K + V+ + IWDTAGQE
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
RF++L ++YRGA +LV+D + TF LE W +E + ++ +D +++GNK+D
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKD---IVKMLVGNKID 125
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 103 bits (248), Expect = 1e-22
Identities = 62/170 (36%), Positives = 94/170 (55%), Gaps = 5/170 (2%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K+II+GDS VGKT L + KF + + TIG DF K + ++ V +Q+WDTAGQER
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQER 107
Query: 266 F-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
F +S+ +YR + V ++D+T +F++L +W E+ A D P +++GNK D
Sbjct: 108 FRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGD---VPKILIGNKCD 164
Query: 443 LD-NRAVSVKRGQQWCQSKNDIPYFETSAK---EAVNVELAFQTIARNAL 580
L R VS +++ S N +P +E S K E +E F T+ L
Sbjct: 165 LGLERTVSSNIARKFADSHN-MPLWEISIKNDAELEQIEAIFLTLTHKLL 213
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 101 bits (243), Expect = 4e-22
Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQY-KATIGA-DFLTKEVIVDDRIVTMQIWDTAGQ 259
K +I+G+SGVGK+ L+N+ N F ++ +T+ D + + D++ + + I DTAGQ
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAGQ 411
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 439
ER+ S+ A++RG LVFD+T TF L W D L + + N +++GNK
Sbjct: 412 ERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWID--LARTTSGADSNIQLILVGNKK 469
Query: 440 DL-DNRAVSVKRGQQWCQSKNDIPYFETSAKE 532
D+ DNRAV+ R +++ + N PY ETSAK+
Sbjct: 470 DMEDNRAVTYSRAKEFA-AMNGFPYIETSAKD 500
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 101 bits (242), Expect = 5e-22
Identities = 63/177 (35%), Positives = 96/177 (54%), Gaps = 3/177 (1%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
L KV++LG++GVGKTSL + F+ + TIG D +K V + ++ VT+ +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW---RDEFLIQASPRDPDNFPFVILG 430
ERF+++ +YRGA C+L+F+V P + + L W DEF PD V++
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFC-------PDALK-VLVA 122
Query: 431 NKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAE 601
NK+DLD + V+ + + + S F SAK + A IA+ L + E E
Sbjct: 123 NKIDLDEQ-VTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKALLRENKELE 178
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 101 bits (242), Expect = 5e-22
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
L K+I++GD+ VGKT L+ QF F TIG DF K V VD V +QIWDTAGQ
Sbjct: 7 LFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDTAGQ 66
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKV 439
ERF+S+ ++Y AD ++ +D+T +F+SL W D+ + + I+GNK
Sbjct: 67 ERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDD----TNRYTSKDVLIAIVGNKS 122
Query: 440 DLD-NRAV 460
DL NR V
Sbjct: 123 DLSTNRKV 130
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 101 bits (241), Expect = 7e-22
Identities = 63/161 (39%), Positives = 93/161 (57%), Gaps = 1/161 (0%)
Frame = +2
Query: 125 SLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGAD 304
S FV K+ S+ TIG +F +K V V + V +QIWDTAGQERF+S+ ++YRGA
Sbjct: 113 STTTAFVVKQDSSH---TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAA 169
Query: 305 CCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD-NRAVSVKRGQQ 481
+LV+D+++ TF SL +W + ASP N +++GNK DLD +R V+ +
Sbjct: 170 GALLVYDISSRETFNSLTNWLTDARTLASP----NIVIILVGNKKDLDADREVTFLEASR 225
Query: 482 WCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL 604
+ Q +N++ + ETSA NVE F +R L + EL
Sbjct: 226 FAQ-ENELMFLETSALTGENVEEGFLKCSRTILNKIESGEL 265
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 97.9 bits (233), Expect = 6e-21
Identities = 51/165 (30%), Positives = 86/165 (52%)
Frame = +2
Query: 77 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAG 256
+++ + +GD G GKT+ + + + +F +Y AT+G + + +WDTAG
Sbjct: 31 IVVSFLQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAG 90
Query: 257 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 436
QE+F L +Y C +++FDVT+ T+K++ +W + R +N P V+ GNK
Sbjct: 91 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-----ERVCENIPIVLCGNK 145
Query: 437 VDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
VD+ +R V K K ++ Y++ SAK N E F +AR
Sbjct: 146 VDIKDRKVKAK--AITFHRKKNLQYYDLSAKSNYNFEKPFLWLAR 188
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 95.5 bits (227), Expect = 3e-20
Identities = 50/131 (38%), Positives = 77/131 (58%)
Frame = +2
Query: 155 FSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTA 334
FS Y TIG DF + + +D V +QIWDTAGQERF+++ +YRG ++V+DVT+
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 335 PNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNRAVSVKRGQQWCQSKNDIPYF 514
+TF +++ W E ++ D+ +++GNK D ++ V Q + +I F
Sbjct: 62 ADTFVNVKRWLHEI-----DQNCDDVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVF 116
Query: 515 ETSAKEAVNVE 547
ETSAKE +NVE
Sbjct: 117 ETSAKENINVE 127
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 93.1 bits (221), Expect = 2e-19
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 11/123 (8%)
Frame = +2
Query: 71 KKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-----------VD 217
K+ L+K + LGDSGVGKTSL+ Q+ + F+ ++ TIG DF K V+
Sbjct: 103 KEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTR 162
Query: 218 DRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 397
+ + +Q+WDTAGQERF+SL AF+R A +LVFD+T +F ++ +W + A
Sbjct: 163 GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYCE 222
Query: 398 DPD 406
+PD
Sbjct: 223 NPD 225
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 419 VILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 565
V+LGNK DL++ V + + + YFETSA NV + + +
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKSVEAL 518
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 92.3 bits (219), Expect = 3e-19
Identities = 48/141 (34%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K++++G GVGK++L QF+ F + Y TI D K+ ++D+R+ + I DTAGQE
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTI-EDSYRKQCVIDERVAHLDILDTAGQEE 71
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 445
F ++ + R + +LVF VT ++F+ + + ++ L +D FP +I GNK DL
Sbjct: 72 FSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQIL---RVKDRTEFPMIICGNKSDL 128
Query: 446 D-NRAVSVKRGQQWCQSKNDI 505
+ R VS GQ+ + +I
Sbjct: 129 EYERTVSTAEGQELARQLREI 149
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 91.9 bits (218), Expect = 4e-19
Identities = 37/93 (39%), Positives = 68/93 (73%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V +D+ V +QIWDTAGQ
Sbjct: 21 MFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQ 80
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLE 358
ER++++ A+YRGA +L++D+T +F++++
Sbjct: 81 ERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 62.5 bits (145), Expect(2) = 3e-18
Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +2
Query: 272 SLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN 451
S + +Y+ A +VFDVT +TF +++ W+++ + + P V+L NK D
Sbjct: 705 SFNIVYYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAK 764
Query: 452 RAVSVKRGQ--QWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETE 595
+ Q ++C K I +FETSAKE VNV A + + L E E
Sbjct: 765 EGLVNNSAQMDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKILQNEKE 814
Score = 47.2 bits (107), Expect(2) = 3e-18
Identities = 19/38 (50%), Positives = 31/38 (81%)
Frame = +2
Query: 68 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 181
R++ L KV+++GD GVGKTSL+ ++V++ FS Y+AT+
Sbjct: 667 RREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 85.4 bits (202), Expect = 4e-17
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
KV++LG GVGK++L QFV +F +Y TI DF KE+ VD+ ++I DTAG E+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEILDTAGTEQ 63
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 445
F S+ + + +LV+ + TF L+ R + L + +N P V++GNK D+
Sbjct: 64 FASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENVPIVLVGNKSDI 120
Query: 446 -DNRAVSVKRGQQWCQSKND 502
D R VS + + ++ D
Sbjct: 121 YDEREVSTSNAKTFLETNKD 140
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 83.0 bits (196), Expect = 2e-16
Identities = 43/116 (37%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Frame = +2
Query: 227 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 406
V +QIWDTAGQERF+++ ++YR + ++ +D+T +TFK++ W ++ A P+
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYA----PE 150
Query: 407 NFPFVILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
N +++GNK DL+ R VS++ + ETSAK+A N+E AF +AR
Sbjct: 151 NAIKLLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLAR 206
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 82.2 bits (194), Expect = 3e-16
Identities = 44/119 (36%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = +2
Query: 227 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 406
+ +QIWDTAGQERF ++ A+YRGA +LV+DVT +F ++ W L + +
Sbjct: 5 IKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKW----LKKIDDHANE 60
Query: 407 NFPFVILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNAL 580
+ +++GNK D+ D R +S +G+Q S I + ETSA +NVE +F + + L
Sbjct: 61 DVKRMLVGNKCDMYDKRVISQTKGEQLASSYG-ISFIETSALSNINVEKSFVVLTEDIL 118
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 81.4 bits (192), Expect = 6e-16
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 206 VIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ 385
+IV+D+ IWDTAGQERF+SL +YR A +LV+D+T +TF SL W E L +
Sbjct: 2 MIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRE-LQR 60
Query: 386 ASPRDPDNFPFVILGNKVD-LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQT 562
P+D + GNK D D R V V+ Q + S + I + ETSA + NV F+
Sbjct: 61 YGPQD---IVIAVAGNKCDKADQRDVQVQDAQDFAGSVDAI-FAETSALTSKNVHWLFEE 116
Query: 563 I 565
+
Sbjct: 117 L 117
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 78.6 bits (185), Expect = 4e-15
Identities = 42/111 (37%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Frame = +2
Query: 242 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 421
W+ AGQERF+++ ++YRGA ++V+D+T ++ +L W E AS + +
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYAS----EGVHMI 428
Query: 422 ILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
++GNK+DLD +R V Q+W + +D+P+ ETSAK A NV+ AF ++R
Sbjct: 429 LVGNKIDLDTDREVQPDAAQEWA-ALHDMPFVETSAKGAKNVKEAFLVLSR 478
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 76.6 bits (180), Expect = 2e-14
Identities = 45/141 (31%), Positives = 78/141 (55%), Gaps = 2/141 (1%)
Frame = +2
Query: 74 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 253
++ + VI++GDS GKT+L+N +V +F+ +Y+AT+ + L+ V VD + + +WDT+
Sbjct: 230 QIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERIELTLWDTS 288
Query: 254 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKS-LESWRDEFLIQASPRDPDNFPFVILG 430
G E + + Y D ++ FD++ P T S LE W +I+ P N P +++G
Sbjct: 289 GHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKW----IIEVCDLCP-NKPVLLVG 343
Query: 431 NKVDLDNRA-VSVKRGQQWCQ 490
K DL + + K + CQ
Sbjct: 344 CKQDLRSEVNIVSKLASKVCQ 364
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 75.8 bits (178), Expect = 3e-14
Identities = 55/177 (31%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Frame = +2
Query: 68 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 247
RKK LK +I+GD GVGKTSL+ ++ F N Y T D V V+ ++ ++ D
Sbjct: 14 RKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEFCD 72
Query: 248 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVI 424
TAGQE F +L Y AD ++ F V +P +F ++ S W E + + P+ P ++
Sbjct: 73 TAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPE-IREFQPK----APIIL 127
Query: 425 LGNKVDL-------------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAF 556
+G DL D++ +SVK+ + + + Y ETS+ N++ F
Sbjct: 128 VGTHSDLKDCYKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVF 184
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 74.5 bits (175), Expect = 7e-14
Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K++I+GD GKT L+ F +F Y T+ +++ ++ VD + V + +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVDGKQVELALWDTAGQED 5989
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKVD 442
+ L Y D ++ F + +P++ +++ E W E + P N P +++GNK D
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP----NVPIILVGNKKD 6044
Query: 443 L-------------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNAL 580
L V ++ G+ + Y E SAK V F+T R AL
Sbjct: 6045 LRMDENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFETATRAAL 6103
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 72.9 bits (171), Expect = 2e-13
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 1/163 (0%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
KV++LG GVGK++L QFV +F +Y TI DF + TAG E+
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDF----------------YHTAGTEQ 47
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 445
F S+ + + +LV+ + TF L+ R + L + +N P V++GNK D+
Sbjct: 48 FASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENVPIVLVGNKSDI 104
Query: 446 -DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
D R VSV + ++ P++ETSAK NV+ F + R
Sbjct: 105 YDEREVSVGEAKDLAEAWG-CPFYETSAKTRSNVDKVFAEVVR 146
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 69.7 bits (163), Expect = 2e-12
Identities = 45/169 (26%), Positives = 89/169 (52%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
+K++++GD GVGK++ + F +Y T+ D + +++D + + +WDTAGQE
Sbjct: 6 VKLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLDGKAYNVGLWDTAGQE 64
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
+ L Y D ++ FD+ + +F+++ES ++L + + P+ P +++GNK D
Sbjct: 65 DYDRLRPLSYPMTDVFLVCFDIGSRTSFENIES---KWLPELNHHMPET-PKILVGNKRD 120
Query: 443 LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 589
L R+ +S++ I Y E +A+ L Q + ++L Q+
Sbjct: 121 L--RSAQQNTSLSNHRSRDPITYEE---GKALAKRLGMQYLENSSLTQD 164
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 69.7 bits (163), Expect = 2e-12
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
+K +++GD VGKT L+ + KF ++Y T+ D V++ T+ ++DTAGQE
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTAGQE 62
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDNFPFVILGNKV 439
+ L Y D ++ F V +P++F+++ E W E + P+ PF+++G +V
Sbjct: 63 DYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKT----PFLLVGTQV 117
Query: 440 DLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVEL-AFQTIARNALAQETEAELYNE 613
DL + ++++ SKN A E + EL A + + +AL Q+ +++E
Sbjct: 118 DLRDDQGTIEK-----LSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFDE 171
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 68.9 bits (161), Expect = 3e-12
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 2/124 (1%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD-DRIVTMQIWDTAG 256
+ +V++LG GVGKTSL+ +F++ FS QY T+G D K V + D ++I DTAG
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSVTLSKDFNAFLEIMDTAG 165
Query: 257 QERFQSLGVAFYRGADCCVLVFDVTAPNTF-KSLESWRDEFLIQASPRDPDNFPFVILGN 433
F ++ + AD VLV+ V + ++LE R+ I+ P V++GN
Sbjct: 166 SYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGK-----TVPMVLVGN 220
Query: 434 KVDL 445
K DL
Sbjct: 221 KTDL 224
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 68.5 bits (160), Expect = 5e-12
Identities = 39/111 (35%), Positives = 60/111 (54%)
Frame = +2
Query: 239 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 418
I DTAGQE + ++ + R + + VF V +F+ + +R++ +D + P
Sbjct: 281 ILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQI---KRVKDAEEVPM 337
Query: 419 VILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
V++GNK DL R VS Q+ +S N IP+ ETSAK V+ AF T+ R
Sbjct: 338 VLVGNKCDLPQRTVSTSDAQELAKSYN-IPFQETSAKTRQGVDDAFYTLVR 387
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 67.7 bits (158), Expect = 8e-12
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 257 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 436
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 437 VDLDN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL 604
DL + R + +RG+Q+ +++ + + ETSA ++ NV AF+ I + + + EL
Sbjct: 58 SDLKHLRMIENRRGKQFA-AEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNEL 113
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +2
Query: 287 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNKVDLDNRAVS 463
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NKVD R V
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRKRLVE 69
Query: 464 VKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 565
G+QW ++ + YFETSA+ + FQT+
Sbjct: 70 ESEGRQWAEN-HKFCYFETSAQTGDGIPEVFQTL 102
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/57 (45%), Positives = 43/57 (75%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDT 250
L KV+++GDSGVGK++L+++F +F+ + K+TIG +F T+ + VD + + QIWDT
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 64.1 bits (149), Expect = 1e-10
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Frame = +2
Query: 89 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERF 268
++ G S VGKTSL+ +F+ F++ Y TI DF K V ++ +QI DT+G F
Sbjct: 31 IVFFGASSVGKTSLILRFLGYAFNDDYSPTI-EDFFIKHVFFNNETYELQIIDTSGTYEF 89
Query: 269 QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL- 445
++ D VLV+ P +F L +R E L R P +++ NK DL
Sbjct: 90 PAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNR----HPCIVVCNKNDLP 145
Query: 446 ---------DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAF 556
D+R + + Q Q++ + + SAKE VE F
Sbjct: 146 LATHLGVLTDHRGLRIS-AQHLVQTEWQSLWIDCSAKENSQVEDIF 190
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ-E 262
++ +LGD GVGKT+L+ +F+ +F +Y TI D K + +DD VT++I DTA + +
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTI-EDKYRKSINIDDVTVTLEILDTASRGQ 65
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN 409
L F R D ++V+ +TF +L +RD + P N
Sbjct: 66 NSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLPSN 114
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 61.7 bits (143), Expect = 5e-10
Identities = 47/192 (24%), Positives = 83/192 (43%), Gaps = 4/192 (2%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNK----KFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 253
KV+++GD+GVGK+ ++++ + + S YK T G + + DT+
Sbjct: 15 KVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGH---ASYFTASNSCHLYLLDTS 71
Query: 254 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 433
G E ++ L + + DC V F + P++ SLE W ++FL D +LG
Sbjct: 72 GLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFL-DVFLGDSSRVLKFVLGC 130
Query: 434 KVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNE 613
K+D + A + + + S+ TSA NV F+ IA + E++ +
Sbjct: 131 KIDTQHEADIQPKAEDFA-SRIGAELSITSAITGTNVNDFFERIADKLKQHVSSTEVWVD 189
Query: 614 FPDQIKLNANDN 649
D N +
Sbjct: 190 KTDNFVAEPNSS 201
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +2
Query: 299 ADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKRG 475
A+ +LV+D+T TF ++ W A+ ++ +ILGNK D+D+ R VS +RG
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHAN----EDVEKMILGNKCDMDDRRIVSRERG 180
Query: 476 QQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 589
+Q + ++ I + ETSAK +N+E AFQ +A++ L +E
Sbjct: 181 EQIAR-EHGIRFLETSAKTNINIEQAFQYLAQDILKKE 217
Score = 35.5 bits (78), Expect = 0.039
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 181
L K++++GDSGVGKT ++ +F + F+ + +TI
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 58.8 bits (136), Expect = 4e-09
Identities = 24/58 (41%), Positives = 40/58 (68%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 253
L K++++GDSGVGK++L++++ +F KATIG + + V ++ + V QIWDTA
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 58.8 bits (136), Expect = 4e-09
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Frame = +2
Query: 59 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 238
M+S +KL KV++ GD+ VGKTS + + A + + V + +
Sbjct: 1 MASERKL--KVVLTGDNNVGKTSFLINLTQNELEGTPTAFANYELGLE---VGSQKFLLD 55
Query: 239 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 418
+WDT G + L Y+G+D +L FD++ TF+ +ES ++L + + P +
Sbjct: 56 LWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIES---KWLPETTQVLPGSIR- 111
Query: 419 VILGNKVDL-DNRAVSVKRGQQWCQSKNDIPY 511
V++GNK D+ R +RG+ S N + Y
Sbjct: 112 VLIGNKNDIRKTRQDKDRRGKVLKMSSNSVIY 143
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 57.2 bits (132), Expect = 1e-08
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Frame = +2
Query: 311 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQWC 487
+LV+D+T ++FK + W ASP N V+LGNK+D D R + +RG+
Sbjct: 6 LLVYDITTEDSFKHISQWLQNIEDNASP----NVCKVLLGNKLDAEDERVIDAQRGRS-V 60
Query: 488 QSKNDIPYFETSAKEAVNVELAFQTIARNALAQ 586
N++ ++E SA+ NV+ AF +AR Q
Sbjct: 61 GEDNNLEFYEASARTGENVQQAFMAVARKIKEQ 93
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/123 (29%), Positives = 62/123 (50%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
+++ ++G GKT+ +N + +FS T+G F ++V + VT+++WD GQ
Sbjct: 21 MELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVG--FNMRKVSKGN--VTIKVWDIGGQP 76
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
RF+S+ + RG +C V + D LE+ ++E P ++LGNK D
Sbjct: 77 RFRSMWERYCRGVNCIVYMVDAA---DHDKLEASKNELHNLLEKPQLAGIPILVLGNKKD 133
Query: 443 LDN 451
L N
Sbjct: 134 LPN 136
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = +2
Query: 77 LLLKVIILGDSGVGKTSLMNQFVNK--KFSNQYKATIGADFLTKEVIVDDRIVTMQIWDT 250
L KV++ GDS VGK++L+ F + + Y T+GA+ L K V + + T +W+
Sbjct: 4 LRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIPE--TTDSVWEH 61
Query: 251 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILG 430
+ ++ +DV+ +F + W + ++ + +N P ++
Sbjct: 62 P----------------NLVIVAYDVSNEQSFNACNKWLER--CRSLAKSDNNLPGALIA 103
Query: 431 NKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSA 526
K DL R +S K+G+ + SKN + YFE SA
Sbjct: 104 TKTDLKQRRVISTKQGKDYANSKN-LEYFECSA 135
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 55.6 bits (128), Expect = 3e-08
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
+KV+ +GD VGKTS + F + A+I D +K + +D + T+ + DT G
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEIDGKRYTVLLCDTPGTM 68
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVILGNKV 439
+ +++ A +L FD+ +F ++ES W ++ S + P V++GNK+
Sbjct: 69 HPRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLETS-----DVPKVLVGNKM 123
Query: 440 DLD-NRAVSVKRGQ----------QWCQSKNDIPYFETSAKEAVNVELAFQT 562
+L ++ S GQ + K++IPY E SAKE +E T
Sbjct: 124 ELRCSQQESTDLGQTHDCVPFTEAKALACKSNIPYVENSAKELKGLEDVLMT 175
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 55.2 bits (127), Expect = 4e-08
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 6/178 (3%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K+ ILG GVGKTSL+ F KFS ++ T+ D+ V +D + I DTAG
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTYA 72
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDE-FLIQA-SPRDPDNFPFVILGNKV 439
F + ++VF + + ++F+ DE + I+ + + ++ NK+
Sbjct: 73 FPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANKL 132
Query: 440 DLD--NRAVSVKRGQQWCQSKNDI--PYFETSAKEAVNVELAFQTIARNALAQETEAE 601
D+D R ++ R ++ + Y E S+ VE F +I + + E E
Sbjct: 133 DIDCRERVITAARAHAELSKRSWLTGEYMEISSMLNFRVERTFHSIVKLIVEDFEEKE 190
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD-----FLTKEVIVDDRIVTMQIWD 247
+++ ++GDSGVGKTSL++ +++ + TIG + KE + + ++ WD
Sbjct: 7 VRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWD 66
Query: 248 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFL 379
G ++ FY G + +LV D+T +F +L W E L
Sbjct: 67 IGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVL 110
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 54.0 bits (124), Expect = 1e-07
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 257 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 436
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 437 VDLDN-RAVSVKRGQQWC 487
DL + R + +RG C
Sbjct: 58 SDLKHLRMIENRRGSNSC 75
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/97 (28%), Positives = 58/97 (59%)
Frame = +2
Query: 56 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTM 235
K SS + ++KV+I+G+ GVGK++L +F+ K+F +Y T+ + + ++ V +V +
Sbjct: 853 KASSHQGRIVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAI 911
Query: 236 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTF 346
++ DTAG+ L G + V+++ +T+ ++F
Sbjct: 912 ELTDTAGENSPAKLERCLEIG-EVFVVLYSITSRHSF 947
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/162 (23%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Frame = +2
Query: 89 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERF 268
+++LG +GVGK++L+ +F +F ++Y T+ + +D+ T+ I DTA +
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTY-DVSATIDEDPATLHITDTA--STY 186
Query: 269 QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD 448
+ + ++ G ++V+ + TF++ + + + + + V+ GNK DL
Sbjct: 187 EPVYLSQNEG---FIVVYSINELRTFETAKQ-LVKLIREIKKQKALTTLIVLAGNKCDLK 242
Query: 449 N-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 571
+ RAVS + +++ ++++ + ETSA +N ++ F R
Sbjct: 243 HCRAVSRQEAREFA-AEHECVFHETSAANNINTKVIFHDCVR 283
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 51.6 bits (118), Expect = 6e-07
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 14/126 (11%)
Frame = +2
Query: 245 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 424
DTAG+E++ L + RGA ++ +D+T ++ K L R L+QA+ +P N VI
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLND-RHLHLLQAA--EP-NCLVVI 333
Query: 425 LGNKVDL---DNRAVSVKRGQQWCQSKNDI-----------PYFETSAKEAVNVELAFQT 562
+G K DL D R ++ G + + +N++ P+FETS+K V+ F+
Sbjct: 334 VGCKKDLVTDDTREITEAAGMELAKVQNELKSRSLLSLKRTPFFETSSKTGDGVDNVFEF 393
Query: 563 IARNAL 580
I L
Sbjct: 394 ILSTCL 399
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
Frame = +2
Query: 287 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD-NRAVS 463
+ R + ++++ +T ++F ++D+ R D+ P V++GNK DL+ R V+
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQI---ERVRRTDDIPIVLVGNKDDLEGKREVT 61
Query: 464 VKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPDQIK 631
+ GQ+ + D P+FETSA + V+ AF + R +E + L F ++ K
Sbjct: 62 TQEGQELAH-RFDCPFFETSACQRHFVDDAFHGLVREIRKKEKQ-RLTGHFQEEKK 115
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 48.4 bits (110), Expect = 5e-06
Identities = 35/121 (28%), Positives = 55/121 (45%)
Frame = +2
Query: 89 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERF 268
V++LG GKTS++ + KF +Y T+ E I + + ++WD G+E+
Sbjct: 24 VVMLGLDKSGKTSILYR---NKF-REYVNTVPTTAFNVETIRPFKGIRFKVWDIGGREQN 79
Query: 269 QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLD 448
+ L A+ R D + V D T+ LE RDE + + P +I NK D
Sbjct: 80 RPLWKAYARQTDAVIYVVDSTSAG---KLEEARDELFNLLNSAQLNGAPILIFANKQDCP 136
Query: 449 N 451
N
Sbjct: 137 N 137
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 48.0 bits (109), Expect = 7e-06
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-VDDRIVTMQIWDTAGQ 259
LK+ I+GD VGKT+L F +Y T D ++ VD ++D+AG
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPT-AYDASEQDFFNVDGIKYQAVLFDSAGG 65
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLE-SWRDEFLIQASPRDPDNFPFVILGNK 436
E F L Y D ++ FD+ +F+++ W E L SP P V++GNK
Sbjct: 66 EDFDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPE-LDHFSP----GVPRVLVGNK 120
Query: 437 VDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAEL 604
DL K+ Q+ S + + Y E KEA Q I +AL E E+
Sbjct: 121 KDL-----RPKQDQEDSHSIDFVSYEE--GKEAAQ-NFKMQYIENSALLNENVKEV 168
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 48.0 bits (109), Expect = 7e-06
Identities = 27/83 (32%), Positives = 45/83 (54%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K+ ++G VGK+SL QFV +F + Y TI F TK + + +++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAGQDE 66
Query: 266 FQSLGVAFYRGADCCVLVFDVTA 334
+ ++ G +LV+ VT+
Sbjct: 67 YSIFPQSYSMGIHGYILVYAVTS 89
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Frame = +2
Query: 59 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD-FLTKEVIVDDRIVTM 235
M+ + + K+ + G GVGKTS+ + +F + ++ D V + ++ + +
Sbjct: 1 MAGPEDEVYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKKLKI 60
Query: 236 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFP 415
+WDT G E ++SL Y + ++V+ + P++ ++ + A
Sbjct: 61 HLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAA-----K 115
Query: 416 FVILGNKVDLDN 451
V++ NK+DL N
Sbjct: 116 IVLVANKMDLPN 127
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 46.4 bits (105), Expect = 2e-05
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKK--FSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAG 256
++++ILGDS VGKT L+ Q K S ++ +I +++ +IVD ++ +++ D
Sbjct: 19 IRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVDGKVYKLELCDVDN 77
Query: 257 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVILGN 433
+ S + D L F V ++F+ +E+ W E + SP N P +++G
Sbjct: 78 LDTKISKP---FSDTDVFCLCFSVGDMDSFRHVENKWYAE-VKNCSP----NSPIIVVGT 129
Query: 434 KVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKE 532
K DL + KRG++ +D P S KE
Sbjct: 130 KTDLRENE-NKKRGKK----DDDSPTAIVSVKE 157
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/73 (28%), Positives = 43/73 (58%)
Frame = +2
Query: 59 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 238
M ++ L ++ + G +GVGKTS++ +F KFS +Y+ T+ D +K + + I+ +
Sbjct: 1 MKEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMVLN 59
Query: 239 IWDTAGQERFQSL 277
D++G +F ++
Sbjct: 60 TTDSSGSYQFPAM 72
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/140 (24%), Positives = 70/140 (50%)
Frame = +2
Query: 32 IIV*KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 211
+++ K++ S +++++LG GKT+++ + K+ + TIG + E +
Sbjct: 3 LLLSKVITLFSEFGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIP-TIGFNV---ETL 58
Query: 212 VDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQAS 391
+ VT+ IWD GQ++ + L +++G + L+F V + + + E+ + + S
Sbjct: 59 QPTKNVTLTIWDVGGQDKIRPLWRHYFQGTE--GLLFVVDSSDVLRMPEAKEELHGVLDS 116
Query: 392 PRDPDNFPFVILGNKVDLDN 451
D P V++ NK DL N
Sbjct: 117 DEFRD-VPVVVVANKQDLPN 135
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +2
Query: 59 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI-VDDRIVTM 235
M S ++V++LG GVGK++L +F+ ++F +Y T+ + + ++ +D+ V++
Sbjct: 9 MHSNTTKPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTL--ESTHRHILQIDNEDVSL 66
Query: 236 QIWDTAGQER 265
I DTAG+ R
Sbjct: 67 DISDTAGEVR 76
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +2
Query: 62 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 184
S+ ++L KV+I+GD+ VGKTS + ++V+ +YK TIG
Sbjct: 16 STMSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 41.9 bits (94), Expect = 4e-04
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Frame = +2
Query: 221 RIVTMQIWDTAGQERF-----QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ 385
+ V + I DT G+ R +S YR V+VFDVT +F+ + +W D +
Sbjct: 15 KTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLD----K 70
Query: 386 ASPRDPDNFPFVILGNKVD--LDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQ 559
P V++GNK D L++ + ++ + N Y ETSA N++ F
Sbjct: 71 VQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYA-TNNGFLYIETSALGMCNIDEIF- 128
Query: 560 TIARNALAQETE 595
I L Q+ E
Sbjct: 129 AILLELLMQQAE 140
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 40.7 bits (91), Expect = 0.001
Identities = 33/153 (21%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
+ ++ ++G GVGK+S+ +++ +F+ E+ ++ +++ DTAGQ
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEFT--------------EIDYCGKLYDIEVVDTAGQ 2643
Query: 260 ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD-NFPFVILGNK 436
E + S + D +++F + + +++ L+ R + + + + P VI+GNK
Sbjct: 2644 EEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVGNK 2703
Query: 437 VDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEA 535
+ N S + Q Q N T K A
Sbjct: 2704 MTGLNVRESFQLMMQQIQKINPALLERTIPKNA 2736
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 419 VILGNKVDLD-NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETE 595
V++GNK LD R VSV G+ + +P+FETSA++ +NV F+ + + L + +
Sbjct: 12 VLVGNKCHLDCEREVSVAEGRGLAKELG-LPFFETSAEKNINVTDCFEALVDSILEEIKQ 70
Query: 596 AELY 607
E++
Sbjct: 71 KEIF 74
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Frame = +2
Query: 86 KVIILGD-SGVGKTS--LMNQFVNKKFSNQYKATIGADFLTKEVI------VDDRIVTMQ 238
K++ +GD +G GK L + N+ S K TIG DF + D V +Q
Sbjct: 52 KIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKKKDSTVKLQ 111
Query: 239 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDE 373
WD A ERF + + R ++ + +P+ S W ++
Sbjct: 112 FWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEK 156
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 39.9 bits (89), Expect = 0.002
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Frame = +2
Query: 302 DCCVLVFDVTAPNTFKSLESWRDEFLIQASPR-DPDNFPFVILGNKVDLDNRAVSVKRGQ 478
D ++++DV A N K LE +++ L PFVI+ +K D D + ++
Sbjct: 156 DGFLVLYDVEATNA-KRLEDTQEKVLSAVITYVQKSKRPFVIVASKCD-DTQLSLLQEVY 213
Query: 479 QWCQSKN-DIPYFETSAKEAVNVELAFQTIAR 571
++ Q+K ++P ETS + VNV+LAF +A+
Sbjct: 214 RFAQTKKLNVPIVETSTYQNVNVDLAFVVLAQ 245
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 287 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNK 436
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NK
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANK 55
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +2
Query: 89 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 184
+++LG +GVGKT+L+ +FV +F N+Y T+G
Sbjct: 327 MVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 38.7 bits (86), Expect = 0.004
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFL--TKEVIVD----DRI-VTMQI 241
LK+ ++GD+ VGKT ++ ++ + S Q T+ + +E DR+ +
Sbjct: 9 LKLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTY 68
Query: 242 WDTAGQERFQSLGVA-----FYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDP 403
WDT R + L ++ YR D ++ FD+T P +F+++ + W E L P
Sbjct: 69 WDTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPE-LKHYMPET- 126
Query: 404 DNFPFVILGNKVDL 445
P +++GNK D+
Sbjct: 127 ---PVLVVGNKKDM 137
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/59 (33%), Positives = 35/59 (59%)
Frame = +2
Query: 50 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI 226
L K SS L + +LG+ VGK+SL+ F + F +Y TI +F++K ++ +D++
Sbjct: 17 LGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHLLYNDQL 74
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 37.9 bits (84), Expect = 0.007
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 407 NFPFVILGNKVDLDN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 565
N +++GNK D++ R VS RG+Q + ++ETSAK+ NV+ F+ +
Sbjct: 12 NAQVILVGNKCDMEEERVVSYDRGKQLADQLG-LEFYETSAKDNTNVKKVFERL 64
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 37.9 bits (84), Expect = 0.007
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 184
L+V++LG GVGK++L + + K+F +Y +T+G
Sbjct: 17 LRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 37.5 bits (83), Expect = 0.010
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQ--YKATIGADFLTKEVIVDDRIVTMQIWDTAG 256
+K+++LG+SG GKTS + V + NQ T+G +V D + +Q+ D AG
Sbjct: 261 IKLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVIRNWQVEPDG--LEVQVVDCAG 318
Query: 257 QERFQ 271
Q R+Q
Sbjct: 319 QRRYQ 323
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 37.1 bits (82), Expect = 0.013
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
Frame = +2
Query: 200 KEVIVDDRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFL 379
KE+ + D + + I DTAG ++ D V+V+ +T + S E R
Sbjct: 6 KELRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSIT---DYYSYEMARQLVK 57
Query: 380 IQASPRDPDNF---PFVILGNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVEL 550
+ R D+ P V++GNK DL K + S+ ++ETSA NV +
Sbjct: 58 LVTQVRKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHV 117
Query: 551 AFQTIA 568
F +A
Sbjct: 118 IFYNMA 123
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 37.1 bits (82), Expect = 0.013
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = +2
Query: 62 SSRKKLLLKVIILGDSGVGKTSLMNQFV--NKKFSNQYKATIGAD-FLTKEVIVDDRIVT 232
S+R +K++++G GKT+LM++ + N F N I + F K+ + +
Sbjct: 545 SARGYYSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFI- 603
Query: 233 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDV-TAPNTFKSLESWRDEFLIQASPRDPDN 409
+IWD GQE + + F +LV+++ LE W D S R P +
Sbjct: 604 FKIWDFGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTI----SARAPGS 659
Query: 410 FPFVILGNKVD 442
VI+G +D
Sbjct: 660 -SLVIVGTHLD 669
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +2
Query: 59 MSSRKK--LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGA 187
M RKK LLKV+++GDS VGKT L+ F+ ++ Q T G+
Sbjct: 3 MKPRKKQDYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAGS 47
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 36.7 bits (81), Expect = 0.017
Identities = 29/122 (23%), Positives = 53/122 (43%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
+K++I GD GKT + ++ K F+ QY T E+ DD G
Sbjct: 226 MKIVIKGDRNTGKTCMFHRLHGKPFNEQY-------IPTNEIQEDD----------DGNA 268
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
+ V Y+G +++ D+T P W ++ + P+ P + P ++L N+ D
Sbjct: 269 VLDAGFVDVYKGTHGVLMLLDITKP--------WTFTYVRRELPKVPPHIPVLVLANRRD 320
Query: 443 LD 448
++
Sbjct: 321 ME 322
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Frame = +2
Query: 107 SGVG-KTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGV 283
SG G KT+++ + K+ N T+ E I + +T +WD GQ++ + L
Sbjct: 117 SGRGRKTTILYKLKLKETVN----TVPTVAFNVETISPCKNITFSVWDIGGQDKIRRLWR 172
Query: 284 AFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 445
+++GA+ + V D + R+E + + P V++ NK DL
Sbjct: 173 HYFQGAEGIIFVVDSADKERIFEV---REELTRVLQHSELNGVPVVVVANKQDL 223
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 35.9 bits (79), Expect = 0.029
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +2
Query: 287 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAVS 463
+YRGA +LV+D+ T++++E W E A N +++GNK DL + RAV
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDLRHLRAVP 57
Query: 464 VKRGQQWCQ 490
+ + +
Sbjct: 58 TDEAKAFAE 66
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 181
K+ ILG S VGKTSLM K F+N++ TI
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTI 220
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 35.5 bits (78), Expect = 0.039
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 419 VILGNKVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAF 556
V++GNK DL D R V +GQ + + + ETSAK +NV F
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIF 48
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 35.1 bits (77), Expect = 0.051
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 214
L KV+ G GVGKTSL + ++KF + + D KEV+V
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKFYGKESRDMTPDICVKEVVV 71
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 34.7 bits (76), Expect = 0.068
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2
Query: 311 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRGQQ 481
+LV+D+T +F+ ++W AS +D + ++LGNK D+ D R VS +RG+Q
Sbjct: 89 MLVYDITNDKSFEKHQNWIRNIEEHAS-QDVEK---MVLGNKCDMEDRRQVSKERGEQ 142
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 34.3 bits (75), Expect = 0.090
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 59 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQ 238
M+S +K++ +G G GKT+L+NQ + K S + I D+ ++ R + +
Sbjct: 1105 MNSVPYYRMKLVTVGMGGRGKTTLLNQLLKSKASAPHNELIIRDW----CLMSSRTLYLA 1160
Query: 239 IWDTA-GQERFQSL 277
++D + G + F+SL
Sbjct: 1161 VYDVSKGVQEFESL 1174
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/59 (25%), Positives = 33/59 (55%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQ 259
L V +LG GVGK++ + + ++F +Y + ++ + +D + + + + DTAG+
Sbjct: 182 LSVAVLGKDGVGKSAFTVRALTRRFIGEYDPFLELNY-KHSMEIDGQYLALDVLDTAGK 239
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/119 (21%), Positives = 60/119 (50%)
Frame = +2
Query: 95 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQS 274
++G GKT+++ + ++ + T+G + T V + ++ +WD GQ++ ++
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVP-TLGFNVET----VTYKNISFTVWDIGGQDKIRA 55
Query: 275 LGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN 451
L +Y+G C ++F V + + ++ E+ R+E + + +++ NK D+ N
Sbjct: 56 LWRVYYQG--CQGIIFVVDSADRERAEEA-RNELHKLLAEEELQQVILLVIANKQDMAN 111
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.1 bits (72), Expect = 0.21
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 227 VTMQIWDTAGQERFQSLGVAFYR 295
+ + +WDTAGQE F ++ A+YR
Sbjct: 34 IRLMLWDTAGQEEFDAITKAYYR 56
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 32.3 bits (70), Expect = 0.36
Identities = 27/136 (19%), Positives = 62/136 (45%)
Frame = +2
Query: 44 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDR 223
KL + +K++ +++++G GKT+++ + + TIG + T V+ +
Sbjct: 7 KLFAGLFGKKEM--RILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVET----VEYK 59
Query: 224 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 403
++ +WD GQ++ + L +++ + V D N + + R+E + +
Sbjct: 60 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERVGEAREELNRMLNEDEL 116
Query: 404 DNFPFVILGNKVDLDN 451
+ ++ NK DL N
Sbjct: 117 RDAVLLVFANKQDLPN 132
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 31.9 bits (69), Expect = 0.48
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 497 NDIPYFETSAKEAVNVELAFQTIAR 571
+++ + ETSAK +NV+LAF IAR
Sbjct: 150 HNVAFMETSAKTGLNVDLAFMAIAR 174
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 434 KVDL-DNRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTI 565
++DL R +S K GQ+W +++ D+ Y+ETS+ V F +
Sbjct: 37 QIDLISRRVISSKEGQKWARAQ-DLKYYETSSANGQGVYEMFNDL 80
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/131 (19%), Positives = 61/131 (46%)
Frame = +2
Query: 74 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 253
K ++++++G GKT+++ + + TIG + + V+ + ++ +WD
Sbjct: 15 KKQMRILMVGLDAAGKTTILYKLKLGEIVTTIP-TIGFNVES----VEYKNISFTVWDVG 69
Query: 254 GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGN 433
GQ++ + L +++ + V D N + + ++E + + +++ N
Sbjct: 70 GQDKIRPLWRHYFQNTQGLIYVVD---SNDRERVNESKEELNKMLQEDELKDAVVLVMAN 126
Query: 434 KVDLDNRAVSV 466
K DL N A+SV
Sbjct: 127 KQDLPN-ALSV 136
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 89 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI----VTMQIWDTAG 256
++ILG GKT+L+ Q + +KF Y T + +I V + WD G
Sbjct: 24 ILILGLDNAGKTTLLEQ-IKRKFCKTYNGIPFEKITTTVGLNIGKITISHVKLMFWDLGG 82
Query: 257 QERFQSL 277
Q+ ++L
Sbjct: 83 QQELRTL 89
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/121 (19%), Positives = 53/121 (43%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
L+++++G GKT+++ + N TIG + +V+ + + +WD GQ+
Sbjct: 91 LRLLMVGLDAAGKTTILYHLKLDEPVNTIP-TIGFNV----EVVEYKNIKFTVWDIGGQD 145
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVD 442
+ + L +++ + V D N ++ ++E + ++L NK D
Sbjct: 146 KIRLLWRLYFQETQGLIFVVD---SNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQD 202
Query: 443 L 445
L
Sbjct: 203 L 203
>SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 80 LLKVIILGDSGVGKTSLMNQFVNKK 154
LLKV I+G+ GK++L+NQ V +K
Sbjct: 39 LLKVAIIGEPNSGKSTLINQLVGEK 63
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 89 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDD 220
V +LG +G GKT ++ +NK + NQ + + D K V D+
Sbjct: 2508 VFVLGPAGTGKTQVIRS-LNKTYMNQKRKPMMFDLNPKAVTADE 2550
>SB_38579| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTA 253
K+ ++GD+ GKTSL+N V K + + T+ + +V D + +WD++
Sbjct: 63 KLSVVGDAESGKTSLLNALV--KSDIEVEETVIFEECVTDVTSGDSNLEFMLWDSS 116
>SB_11465| Best HMM Match : EGF (HMM E-Value=0.13)
Length = 695
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 360 LSKDLNVLGAVTSKTNTQQSAPR*KATPSDWNRSWPAVSHICIVTILSSTITSFV 196
L+K LN+ V S N+ + + P + +SH ++TIL S I+ F+
Sbjct: 525 LNKQLNISIGVISTWNSTRDIRKENIDPESRKKDEVHISHAVVITILVSGISGFL 579
>SB_3199| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 399
Score = 29.1 bits (62), Expect = 3.4
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = -2
Query: 351 DLNVLGAVTSKTNTQ-QSAPR*KATPSDWNRSWPAVSHICIV--TILSSTITSFVRKSAP 181
DLN+ G T + Q QS+ W ++ +++ I+ ++L +++T +V
Sbjct: 2 DLNLTGNFTFPNSKQNQSSMCLPYKDEVWVKALKGATYVLIIALSLLGNSLTIYVISKKK 61
Query: 180 IVALYWLENFLLTN*FIRDVFPTPLSPRIIT 88
A+ NFL+ N + D+F T +S I+T
Sbjct: 62 --AMRSTTNFLIANKCVADLFITCVSMPIVT 90
>SB_3591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1585
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
Frame = -3
Query: 527 WHLSQNTGCRSCS----GTIVDHV*QKRHDYPSRLC 432
W+LS N GC+ GT +D + +H+ P +C
Sbjct: 875 WYLSDNNGCKKSKENLVGTTLDQENECQHEIPKDVC 910
>SB_51371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1325
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/86 (22%), Positives = 37/86 (43%)
Frame = +2
Query: 47 LLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRI 226
LL K+ S K +++++LG GKT+++ ++ + T F K V
Sbjct: 6 LLRKLKSEKDREMRILLLGLDNSGKTTILKSLASE---DVLHITPTQGFNIKSVQSKGGF 62
Query: 227 VTMQIWDTAGQERFQSLGVAFYRGAD 304
+ +WD GQ + + ++ D
Sbjct: 63 -RLNVWDIGGQRKIRPYWKNYFENTD 87
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +2
Query: 74 KLLLKVIILGDSGVGKTSLMNQFVNKKFSN 163
K+ +KV++LG GKTSL+ ++++ +F++
Sbjct: 25 KVDVKVVLLGKEYSGKTSLVERYLHHRFND 54
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 89 VIILGDSGVGKTSLMNQFVNKK 154
+++ G G GKTSL+N F++K+
Sbjct: 364 ILLTGPRGCGKTSLINDFLDKQ 385
>SB_44764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +2
Query: 44 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE 205
K++C +SSR+ + + + D G+ + SL+N K ++ ++ + L +E
Sbjct: 205 KIVCSVSSRECCVEESFVGDDRGIDEASLLNALKEKGIVDEVMRSLRFEGLERE 258
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 74 KLLLKVIILGDSGVGKTSLMNQFVNKKF 157
K++ V + GDSGVGKT+L Q V K F
Sbjct: 117 KMIRAVNLFGDSGVGKTTLA-QEVAKSF 143
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,144,258
Number of Sequences: 59808
Number of extensions: 443561
Number of successful extensions: 1408
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 1290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1705624125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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