Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0237
(664 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein. 137 3e-34
AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small... 68 3e-13
CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein ... 27 0.70
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 24 3.7
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 24 3.7
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 24 3.7
AJ439060-5|CAD27756.1| 245|Anopheles gambiae putative deoxynucl... 24 4.9
AF488801-1|AAO49462.1| 246|Anopheles gambiae multisubstrate deo... 24 4.9
AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione S-tran... 23 8.6
AF316635-1|AAG45163.1| 224|Anopheles gambiae glutathione S-tran... 23 8.6
>EF127647-1|ABL74413.1| 213|Anopheles gambiae Rab5 protein.
Length = 213
Score = 137 bits (331), Expect = 3e-34
Identities = 75/190 (39%), Positives = 109/190 (57%), Gaps = 1/190 (0%)
Frame = +2
Query: 86 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQER 265
K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ + +DD V +IWDTAGQER
Sbjct: 26 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDTAGQER 85
Query: 266 FQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL 445
+ SL +YRGA ++V+D+ ++F ++W E QASP N + GNK DL
Sbjct: 86 YHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQASP----NIVIALAGNKADL 141
Query: 446 DN-RAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPD 622
N R V + +Q+ N + + ETSAK AVNV F IA+ E N P
Sbjct: 142 ANSRVVDYEEAKQYADD-NRLLFMETSAKTAVNVNDIFLAIAKKLPKNEGAGPQQNIRPT 200
Query: 623 QIKLNANDNG 652
Q + N ++G
Sbjct: 201 QNETNRQNSG 210
>AJ438610-3|CAD27475.1| 190|Anopheles gambiae putative RHO small
GTPase protein.
Length = 190
Score = 67.7 bits (158), Expect = 3e-13
Identities = 40/135 (29%), Positives = 70/135 (51%), Gaps = 3/135 (2%)
Frame = +2
Query: 83 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQE 262
+K +++GD VGKT ++ + F +Y T D + ++VD V++ +WDTAGQE
Sbjct: 7 IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPT-SFDNYSAPMVVDGVQVSLGLWDTAGQE 65
Query: 263 RFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPRDPDNFPFVILGNKV 439
+ L Y D ++ + V +P++F+++ S W E PD P +++G K+
Sbjct: 66 DYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI----KHHCPD-APIILVGTKI 120
Query: 440 DL--DNRAVSVKRGQ 478
DL D +S+ Q
Sbjct: 121 DLREDRETISLLADQ 135
>CR954257-5|CAJ14156.1| 227|Anopheles gambiae predicted protein
protein.
Length = 227
Score = 26.6 bits (56), Expect = 0.70
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 428 GNKVDLDNRAVSVKRGQQWCQSKNDIPYFETSAK 529
G VDL ++ VK + C +N++PY E K
Sbjct: 109 GEYVDLARPSMIVKCTRNVCTGRNEVPYREQCVK 142
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 24.2 bits (50), Expect = 3.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 95 ILGDSGVGKTSLMN 136
++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 24.2 bits (50), Expect = 3.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 95 ILGDSGVGKTSLMN 136
++G SG GKT+L+N
Sbjct: 131 VMGSSGAGKTTLLN 144
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 24.2 bits (50), Expect = 3.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 95 ILGDSGVGKTSLMN 136
++G SG GKT+L+N
Sbjct: 109 VMGSSGAGKTTLLN 122
>AJ439060-5|CAD27756.1| 245|Anopheles gambiae putative
deoxynucleoside kinase protein.
Length = 245
Score = 23.8 bits (49), Expect = 4.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 56 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 163
K+ + K V + G+ G GKT+ +N F +KF++
Sbjct: 8 KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41
>AF488801-1|AAO49462.1| 246|Anopheles gambiae multisubstrate
deoxyribonucleoside kinaseprotein.
Length = 246
Score = 23.8 bits (49), Expect = 4.9
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 56 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 163
K+ + K V + G+ G GKT+ +N F +KF++
Sbjct: 8 KLGASGKKPFTVFVEGNIGSGKTTFLNHF--QKFND 41
>AY063776-1|AAL59658.1| 224|Anopheles gambiae glutathione
S-transferase E1 protein.
Length = 224
Score = 23.0 bits (47), Expect = 8.6
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = -3
Query: 377 GIRLSNSLRT*TCWGQLRQKLIRSNPPHDRKLLQAIGTVLGQQYPI 240
G+ L L L + ++ NP H +L GT++ + + I
Sbjct: 26 GLELERKLVNLLAGQNLTPEFLKLNPKHTIPVLDDNGTIISESHAI 71
>AF316635-1|AAG45163.1| 224|Anopheles gambiae glutathione
S-transferase E1 protein.
Length = 224
Score = 23.0 bits (47), Expect = 8.6
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = -3
Query: 377 GIRLSNSLRT*TCWGQLRQKLIRSNPPHDRKLLQAIGTVLGQQYPI 240
G+ L L L + ++ NP H +L GT++ + + I
Sbjct: 26 GLELERKLVNLLAGENLTPEFLKLNPKHTIPVLDDNGTIISESHAI 71
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 719,265
Number of Sequences: 2352
Number of extensions: 14977
Number of successful extensions: 38
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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