Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0235
         (704 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    24   5.4  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   7.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   7.1  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   9.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   9.4  

>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 205 LLYNCMRLSPLCRAGFLTNSCNFKVSWC 122
           L+YN + L PL    ++  +  + + WC
Sbjct: 552 LIYNLVTLEPLMYRQYVYPTVAYGIGWC 579


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 6/18 (33%), Positives = 14/18 (77%)
 Frame = +1

Query: 241 YHWLRSLLISWNSMSTRE 294
           Y+WL  LL+ W++++ ++
Sbjct: 4   YYWLALLLLGWSTVTAQK 21


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 581 PPVGAPNVPKRCAVVTASG 525
           PP G PN P   + VT  G
Sbjct: 496 PPGGRPNAPNPSSAVTPGG 514


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 619  RRYQHVQWQVGPHPPSAHPTYRSAAR 542
            R Y+    +  P PP+  PT R AAR
Sbjct: 1120 RAYRQRNRRSQPTPPAPPPTPREAAR 1145


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 406 MMQPRK*LNI*KVHSKMLMV*LQFTDDF 489
           +  P +  NI ++  KML++  +F++DF
Sbjct: 326 LSDPNELTNINRIKGKMLLLQRRFSEDF 353


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,649
Number of Sequences: 2352
Number of extensions: 15273
Number of successful extensions: 59
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)