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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0230
         (385 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)             43   7e-05
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)              43   1e-04
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)                        42   1e-04
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)              40   0.001
SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)         33   0.080
SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.080
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.14 
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.43 
SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11)         30   0.56 
SB_46360| Best HMM Match : EGF (HMM E-Value=0)                         29   0.98 
SB_6077| Best HMM Match : EGF (HMM E-Value=0)                          29   0.98 
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)            29   1.7  
SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.0  
SB_50709| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.2  
SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.2  
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.2  
SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)               27   5.2  
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   5.2  
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)               27   6.9  
SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)                26   9.2  
SB_36746| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.2  
SB_28664| Best HMM Match : Antimicrobial_1 (HMM E-Value=2.6)           26   9.2  
SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   9.2  

>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
          Length = 151

 Score = 43.2 bits (97), Expect = 7e-05
 Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
 Frame = +2

Query: 50  SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 208
           SG+ V D      + +K  K H+Y +F I DE  + V     ++V     E ++  F + 
Sbjct: 4   SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63

Query: 209 LQKGGTGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSFD 379
           ++K    E  Y L+D ++  +     E      L  +SWC D A ++KKM  +++ D
Sbjct: 64  VEKLSDREPRYILYDMKFPRK----EEKRIFNNLVFISWCSDKAPIEKKMKLASTQD 116


>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 150

 Score = 42.7 bits (96), Expect = 1e-04
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
 Frame = +2

Query: 50  SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 196
           SG+ + D     Y+ ++ K+K H++  F I D+          K++D  T  E  A ++Q
Sbjct: 4   SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63

Query: 197 FLEDLQKGGTGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKML 361
            LE L      E  Y L+D  +  +     +      L  + WC D A +KK+M+
Sbjct: 64  MLEKLSDS---EPRYILYDLNFPRK-----DGRAFHHLVYIFWCSDNAPIKKRMV 110


>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
          Length = 387

 Score = 42.3 bits (95), Expect = 1e-04
 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
 Frame = +2

Query: 44  MASGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQ 214
           M +G+ +       + EIKK     RY++F + ++K+  V    +   E  +E  L+DL 
Sbjct: 247 MEAGLNIKGEVTDGWNEIKKAASGLRYIIFKMDEKKENVVFEKKKMKCECSHEDVLDDLP 306

Query: 215 KGGTGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSF 376
                E  Y   + +Y +      E + + KL L+ WCPD  ++K +M+ + +F
Sbjct: 307 ---ADEPRYIALNLDYKNV-----EGADRSKLVLIFWCPDNCEIKSRMVSAATF 352


>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 140

 Score = 39.5 bits (88), Expect = 0.001
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
 Frame = +2

Query: 50  SGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQKG 220
           +G+ +       + EIK      RY +F + ++K+  V    +   E  ++  L+DL   
Sbjct: 2   AGLNIKSDVTDGWNEIKMVASGLRYTIFKMDEKKENVVMEKKKMITECCHDDVLDDLP-- 59

Query: 221 GTGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSF 376
            T E  Y   + +Y ++     E +++ KL L+ WCPD   +K KM+ + +F
Sbjct: 60  -TDEPRYVALNLDYKNE-----EGAERSKLVLIFWCPDNCGIKNKMVSAATF 105


>SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)
          Length = 193

 Score = 33.1 bits (72), Expect = 0.080
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 155 DVETVGERNAEYEQFLEDLQKGGT---GECXYGLFDFEYTHQCQGTSEASKK 301
           D E  GER   +  +L+DL++        C YG+   E T+   G  +ASKK
Sbjct: 83  DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 134


>SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 311

 Score = 33.1 bits (72), Expect = 0.080
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 155 DVETVGERNAEYEQFLEDLQKGGT---GECXYGLFDFEYTHQCQGTSEASKK 301
           D E  GER   +  +L+DL++        C YG+   E T+   G  +ASKK
Sbjct: 139 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 190


>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1681

 Score = 32.3 bits (70), Expect = 0.14
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = +2

Query: 155 DVETVGERNAEYEQFLEDLQKGGT---GECXYGLFDFEYTHQCQGTSEASKK 301
           D E  GER   +  +L+DL++        C YG  + E T+   G  +ASKK
Sbjct: 422 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGGSEAEVTYSLHGFGDASKK 473


>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 237

 Score = 30.7 bits (66), Expect = 0.43
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 327 HHDIRKSFCFLLASDVPWHWCVYSKSNRPYXHSPVP-PFCRS 205
           H  + + +C+   S V   +C +S  +RPY HSPV  P+C S
Sbjct: 130 HSPVDRPYCY---SPVDHPYC-HSPVDRPYCHSPVDRPYCHS 167



 Score = 30.3 bits (65), Expect = 0.56
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -2

Query: 324 HDIRKSFCFLLASDVPWHWCVYSKSNRPYXHSPVP-PFCRS--SRNCSYSALRSP 169
           H   + +C    S V   +C YS  +RPY HSPV  P+C S   R   YS +  P
Sbjct: 95  HSWSRPYCH---SPVDRPYC-YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145



 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -2

Query: 288 SDVPWHWCVYSKSNRPYXHSPVP-PFCRS 205
           S V   +C +S  +RPY HSPV  P+C S
Sbjct: 149 SPVDRPYC-HSPVDRPYCHSPVDRPYCHS 176


>SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11)
          Length = 597

 Score = 30.3 bits (65), Expect = 0.56
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 143 EKQIDVETVGERNAEYEQFLEDLQKGGT---GECXYGLFDFEYTHQCQGTSEASKK 301
           E ++     GER   +  +L+DL++        C YG+   E T+   G  +ASKK
Sbjct: 222 EVRLGRRLTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 277


>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
          Length = 352

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 335 CPGTTTSGRASVS-C*PPTCPGTGACIQSQTGHXCI 231
           CP   T     VS C    C   G+C+ +Q+G+ C+
Sbjct: 189 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 224


>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
          Length = 1165

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 335  CPGTTTSGRASVS-C*PPTCPGTGACIQSQTGHXCI 231
            CP   T     VS C    C   G+C+ +Q+G+ C+
Sbjct: 1002 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 1037


>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
          Length = 310

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 266 HQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSFDAL 385
           H+ Q    A      FL   C D A +KKKML  ++++ L
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYL 280


>SB_56973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 628

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -3

Query: 338 RCPGTTTSG-RASVSC*PPTCPGTGAC 261
           +CP T + G R  V C P  CP T  C
Sbjct: 484 QCPKTLSCGHRCGVECHPGACPDTLVC 510


>SB_50709| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 953

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 311 RASVSC*PPTCPGTGACIQSQTGHXCI 231
           +A+V C P  C   G C++   G  C+
Sbjct: 652 KATVDCKPGACRNNGKCVEIPGGFQCL 678


>SB_37875| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 544

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 212 QKGGTGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDT 337
           +K GTG    G FDF   H+ +  + A      ++MS   DT
Sbjct: 180 KKDGTGTTITGEFDFPVRHKAEIINIAVASNGKYIMSCSKDT 221


>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 266

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = -2

Query: 303 CFLLASDVPWHWCVYSKSN---RPYXHSPVPPFCRS 205
           C++  + +  H C+ +      RPY H P PPF  S
Sbjct: 28  CYIFCNGLMDHLCLCNALGSPYRPYPHPPHPPFTSS 63


>SB_37321| Best HMM Match : Pkinase (HMM E-Value=2.4e-27)
          Length = 592

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 23/78 (29%), Positives = 32/78 (41%)
 Frame = -2

Query: 234 HSPVPPFCRSSRNCSYSALRSPTVSTSICFSSRM*KTT*RCFLSFLISS*VVLQASETVT 55
           HSP     R +  C Y+   SP V TS  F +R    + R F     S   V + S   T
Sbjct: 392 HSPATTNMRRAIMCPYAPSTSPRV-TSTTFRTRHRTLSARFFSDVPESHVYVHRISCLRT 450

Query: 54  PDAIF*CYSRKNYTTNFT 1
            + +F C   + Y   F+
Sbjct: 451 SNLVFTCIESRVYVHRFS 468


>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 441

 Score = 27.1 bits (57), Expect = 5.2
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = -3

Query: 335 CPGTTTSGRASVSC*PPTCPGTGACIQSQTGHXC 234
           C GT  + +    C    C  +G C QS  G  C
Sbjct: 211 CGGTNCTQKCGKDCQQVVCSASGKCDQSCDGEGC 244


>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
          Length = 478

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 89  EEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 235
           E ++ + KH   V  I +E Q+++ET+     E    LE      T EC
Sbjct: 263 EIVELESKHSAHVEEILEEHQLEIETIKADYEEQRSALETKLFAVTSEC 311


>SB_18760| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1569

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 275 QGTSEASKKQKLFLMSWCPDTAKVKK 352
           QGT   + KQ   L +W PD A++K+
Sbjct: 358 QGTDMLTDKQWERLANWLPDRARIKR 383


>SB_52977| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 929

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +2

Query: 38  QKMASGVTVSDACKTTYEEIKKD--KKHRYVVFYIRDEKQIDVETVG--ERNAEYEQFLE 205
           QK    V   D  + + +E  KD  KK +Y+ +   DE+  D + +   +   EY+ + E
Sbjct: 287 QKKDDSVKDEDEEEESEQEEDKDEEKKVKYLTYESSDEQMYDTDDLNDDDTRGEYDDYEE 346

Query: 206 DLQK 217
            L+K
Sbjct: 347 MLRK 350


>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
          Length = 341

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +2

Query: 155 DVETVGERNAEYEQFLEDLQKGGTGECXYGLFDFEYTHQ 271
           +VET  E++ + E+ +++ ++ G  E    L  FE TH+
Sbjct: 151 EVETTTEQDKQPEEVVKNSEEEGNHEDQEPLLSFEDTHE 189


>SB_36746| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 220

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -2

Query: 348 LTLAVSGHHDIRKSFCFLLASDVPWHWCVYSKSNRPYXHSPVPPFC-RSSRNCSYSA 181
           L   VS  + I  S    LA+D+P  +C+   ++ P       P+C   S +C+ +A
Sbjct: 92  LAAIVSTPYCINYSTDCTLAADIPTPYCINYSTDCPLAADVPTPYCINYSTDCTLAA 148


>SB_28664| Best HMM Match : Antimicrobial_1 (HMM E-Value=2.6)
          Length = 92

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 216 FCRSSRNCSYSALRSPTVSTSICFSSRM 133
           FCR ++ C   ALRS T + +    +RM
Sbjct: 65  FCRFTKGCRQPALRSATTTPATTRQARM 92


>SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 445

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = -2

Query: 267 CVYSKSNRPYXHSPVPPFCRSSRNCSYSALRS 172
           CVY     PY  S +PP   +S   S   LRS
Sbjct: 292 CVYGWVALPYMSSTLPPVAYTSSGLSAGPLRS 323


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,723,083
Number of Sequences: 59808
Number of extensions: 199939
Number of successful extensions: 785
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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