Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0230
(385 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24676-1|AAC46963.1| 148|Drosophila melanogaster twinstar protein. 226 7e-60
U24490-1|AAC46962.1| 148|Drosophila melanogaster twinstar protein. 226 7e-60
U08217-1|AAA19856.1| 148|Drosophila melanogaster protein ( Dros... 226 7e-60
AE013599-3787|AAF47146.1| 148|Drosophila melanogaster CG4254-PA... 226 7e-60
AE014298-2759|AAF48877.1| 148|Drosophila melanogaster CG6873-PA... 140 7e-34
AY069613-1|AAL39758.1| 343|Drosophila melanogaster LD37470p pro... 31 0.39
AJ430055-1|CAD22537.1| 343|Drosophila melanogaster twinfilin pr... 31 0.39
AE014297-1802|AAF55022.1| 343|Drosophila melanogaster CG3172-PA... 31 0.39
AY069123-1|AAL39268.1| 267|Drosophila melanogaster GH13245p pro... 31 0.51
AE013599-3029|AAF57457.3| 267|Drosophila melanogaster CG13430-P... 31 0.51
AE013599-3028|AAF57458.1| 267|Drosophila melanogaster CG13430-P... 31 0.51
AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin... 27 8.4
AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA... 27 8.4
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA... 27 8.4
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ... 27 8.4
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ... 27 8.4
AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymera... 27 8.4
>U24676-1|AAC46963.1| 148|Drosophila melanogaster twinstar protein.
Length = 148
Score = 226 bits (553), Expect = 7e-60
Identities = 102/114 (89%), Positives = 108/114 (94%)
Frame = +2
Query: 44 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 223
MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1 MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60
Query: 224 TGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSFDAL 385
GEC YGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDTAKVKKKMLYS+SFDAL
Sbjct: 61 PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDAL 114
>U24490-1|AAC46962.1| 148|Drosophila melanogaster twinstar protein.
Length = 148
Score = 226 bits (553), Expect = 7e-60
Identities = 102/114 (89%), Positives = 108/114 (94%)
Frame = +2
Query: 44 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 223
MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1 MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60
Query: 224 TGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSFDAL 385
GEC YGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDTAKVKKKMLYS+SFDAL
Sbjct: 61 PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDAL 114
>U08217-1|AAA19856.1| 148|Drosophila melanogaster protein (
Drosophila melanogastercofilin/actin depolymerizing
factor homolog mRNA, completecds. ).
Length = 148
Score = 226 bits (553), Expect = 7e-60
Identities = 102/114 (89%), Positives = 108/114 (94%)
Frame = +2
Query: 44 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 223
MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1 MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60
Query: 224 TGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSFDAL 385
GEC YGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDTAKVKKKMLYS+SFDAL
Sbjct: 61 PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDAL 114
>AE013599-3787|AAF47146.1| 148|Drosophila melanogaster CG4254-PA
protein.
Length = 148
Score = 226 bits (553), Expect = 7e-60
Identities = 102/114 (89%), Positives = 108/114 (94%)
Frame = +2
Query: 44 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 223
MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1 MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60
Query: 224 TGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSFDAL 385
GEC YGLFDFEY HQCQGTSE+SKKQKLFLMSWCPDTAKVKKKMLYS+SFDAL
Sbjct: 61 PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDAL 114
>AE014298-2759|AAF48877.1| 148|Drosophila melanogaster CG6873-PA
protein.
Length = 148
Score = 140 bits (338), Expect = 7e-34
Identities = 58/114 (50%), Positives = 82/114 (71%)
Frame = +2
Query: 44 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 223
MASG+ +S C+ +E+I+K K+HRY VF I+DE++I VE +G R A Y+ FL DLQ+ G
Sbjct: 1 MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYDDFLADLQRAG 60
Query: 224 TGECXYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSNSFDAL 385
+ +C + ++D+EY HQCQGT K+KL LM WCP A++K KMLYS++F L
Sbjct: 61 SNQCRFAVYDYEYQHQCQGTLSTCLKEKLILMLWCPTLARIKDKMLYSSTFAVL 114
>AY069613-1|AAL39758.1| 343|Drosophila melanogaster LD37470p
protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.39
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +2
Query: 314 LMSWCPDTAKVKKKMLYSNS 373
L+SW PDTA +++KM+Y+++
Sbjct: 85 LISWTPDTASIRQKMVYAST 104
>AJ430055-1|CAD22537.1| 343|Drosophila melanogaster twinfilin
protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.39
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +2
Query: 314 LMSWCPDTAKVKKKMLYSNS 373
L+SW PDTA +++KM+Y+++
Sbjct: 85 LISWTPDTASIRQKMVYAST 104
>AE014297-1802|AAF55022.1| 343|Drosophila melanogaster CG3172-PA
protein.
Length = 343
Score = 31.5 bits (68), Expect = 0.39
Identities = 10/20 (50%), Positives = 18/20 (90%)
Frame = +2
Query: 314 LMSWCPDTAKVKKKMLYSNS 373
L+SW PDTA +++KM+Y+++
Sbjct: 85 LISWTPDTASIRQKMVYAST 104
>AY069123-1|AAL39268.1| 267|Drosophila melanogaster GH13245p
protein.
Length = 267
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 62 VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 235
VS T+ +++ +K+ RY V ++RD+ Q G F Q GG C
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSC 212
>AE013599-3029|AAF57457.3| 267|Drosophila melanogaster CG13430-PB,
isoform B protein.
Length = 267
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 62 VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 235
VS T+ +++ +K+ RY V ++RD+ Q G F Q GG C
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSC 212
>AE013599-3028|AAF57458.1| 267|Drosophila melanogaster CG13430-PA,
isoform A protein.
Length = 267
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +2
Query: 62 VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 235
VS T+ +++ +K+ RY V ++RD+ Q G F Q GG C
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSC 212
>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
protein rhinoceros protein.
Length = 3241
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 65 SDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQ 196
++AC TT E+ ++ K HR + Q + + E AE+++
Sbjct: 522 NNACGTTGEDPRRRKNHRKTELTSEERNQARAQRLQEVEAEFDK 565
>AE014297-3316|AAF56126.3| 2236|Drosophila melanogaster CG6768-PA
protein.
Length = 2236
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 86 YEEIKKDKKHRYVVFYIRDEKQIDVETVG 172
Y E++KDK++ + IRDE I E G
Sbjct: 908 YHELRKDKENNLPKYDIRDENSIFFEVDG 936
>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
protein.
Length = 1489
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 55 CDSFGRLQDHLRGDQEGQEASLRCLLHP 138
CD ++ + L+GD G E S R L+P
Sbjct: 783 CDGMDQMNELLQGDNSGAEISFRDELNP 810
>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
isoform B protein.
Length = 3241
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 65 SDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQ 196
++AC TT E+ ++ K HR + Q + + E AE+++
Sbjct: 522 NNACGTTGEDPRRRKNHRKTELTSEERNQARAQRLQEVEAEFDK 565
>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
isoform A protein.
Length = 3201
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 65 SDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQ 196
++AC TT E+ ++ K HR + Q + + E AE+++
Sbjct: 482 NNACGTTGEDPRRRKNHRKTELTSEERNQARAQRLQEVEAEFDK 525
>AB035512-1|BAB17608.1| 2220|Drosophila melanogaster DNA polymerase
epsilon protein.
Length = 2220
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 86 YEEIKKDKKHRYVVFYIRDEKQIDVETVG 172
Y E++KDK++ + IRDE I E G
Sbjct: 908 YHELRKDKENNLPKYDIRDENSIFFEVDG 936
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,525,559
Number of Sequences: 53049
Number of extensions: 284229
Number of successful extensions: 862
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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