Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0229
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical ... 155 4e-38
AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical ... 148 3e-36
Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical p... 126 1e-29
Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical p... 126 1e-29
U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein. 126 1e-29
Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical pr... 31 0.63
U53139-9|AAW88402.1| 379|Caenorhabditis elegans Serpentine rece... 31 0.63
U53139-8|AAK18938.3| 338|Caenorhabditis elegans Serpentine rece... 31 0.63
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 30 1.9
U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81147-2|CAB03532.1| 372|Caenorhabditis elegans Hypothetical pr... 29 4.4
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 28 7.7
AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical ... 28 7.7
AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical ... 28 7.7
>AC091125-7|AAK27890.1| 510|Caenorhabditis elegans Hypothetical
protein Y67D2.1a protein.
Length = 510
Score = 155 bits (375), Expect = 4e-38
Identities = 83/236 (35%), Positives = 132/236 (55%), Gaps = 8/236 (3%)
Frame = +2
Query: 8 AAEYRKFNIDTTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQ-----LMPVP 172
A++ R+F+ID PK+L S+G +V+ L S ++ YAEF+ V R L L PVP
Sbjct: 118 ASQMRRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVP 177
Query: 173 CSRADVFATEAVGIVEKRMLMKMLTSIVGYSE---EEMNNEFKDWNNKTLKEYLTHKGLT 343
CS+ ++F + A+ I+EKR LMK +T +S EE + ++ E+L G+
Sbjct: 178 CSKGEIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVG 237
Query: 344 PNLIHYILYAIAGGNNSLPCLEGVKECKKFLMSLGRYGNTPFLWPMYGSGELPQCFCRLC 523
L +I+ I + G+ +F+ S+G +G +PFL+P+YG GEL QCFCRL
Sbjct: 238 KTLQSFIINTIGILQQRPTAMTGMLASCQFMDSVGHFGPSPFLFPLYGCGELSQCFCRLA 297
Query: 524 AVFGGVYCLNRPIDKVETKTVDEGKTVVTIDSKSKKLNCDHLVIGVHECPEELMSS 691
AVFG +YCL RP+ + K +GK + + + ++NC ++V+ PE + +S
Sbjct: 298 AVFGSLYCLGRPVQAIVKK---DGK-ITAVIANGDRVNCRYIVMSPRFVPETVPAS 349
>AC091125-8|AAP46267.1| 353|Caenorhabditis elegans Hypothetical
protein Y67D2.1b protein.
Length = 353
Score = 148 bits (359), Expect = 3e-36
Identities = 79/219 (36%), Positives = 123/219 (56%), Gaps = 8/219 (3%)
Frame = +2
Query: 8 AAEYRKFNIDTTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQ-----LMPVP 172
A++ R+F+ID PK+L S+G +V+ L S ++ YAEF+ V R L L PVP
Sbjct: 118 ASQMRRFSIDLVPKILLSKGAMVQTLCDSQVSHYAEFKLVNRQLCPTETPEAGITLNPVP 177
Query: 173 CSRADVFATEAVGIVEKRMLMKMLTSIVGYSE---EEMNNEFKDWNNKTLKEYLTHKGLT 343
CS+ ++F + A+ I+EKR LMK +T +S EE + ++ E+L G+
Sbjct: 178 CSKGEIFQSNALSILEKRALMKFITFCTQWSTKDTEEGRKLLAEHADRPFSEFLEQMGVG 237
Query: 344 PNLIHYILYAIAGGNNSLPCLEGVKECKKFLMSLGRYGNTPFLWPMYGSGELPQCFCRLC 523
L +I+ I + G+ +F+ S+G +G +PFL+P+YG GEL QCFCRL
Sbjct: 238 KTLQSFIINTIGILQQRPTAMTGMLASCQFMDSVGHFGPSPFLFPLYGCGELSQCFCRLA 297
Query: 524 AVFGGVYCLNRPIDKVETKTVDEGKTVVTIDSKSKKLNC 640
AVFG +YCL RP+ + K +GK + + + ++NC
Sbjct: 298 AVFGSLYCLGRPVQAIVKK---DGK-ITAVIANGDRVNC 332
>Z99281-33|CAJ44242.1| 459|Caenorhabditis elegans Hypothetical
protein Y57G11C.10b protein.
Length = 459
Score = 126 bits (305), Expect = 1e-29
Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 5/200 (2%)
Frame = +2
Query: 20 RKFNIDTTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCSRADVFAT 199
R +N+D PK L + GPLV+LLI + + RY EF+ + ++ VP + AT
Sbjct: 71 RDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKVPADEMEALAT 130
Query: 200 EAVGIVEKRMLMKMLTSIVGYSEEEMNN-EFKDWNNKTLKEYLTHKGLTPNLIHYILYAI 376
+G+ EKR K L + + E + + + D +N T+++ GL N + +A+
Sbjct: 131 SLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDENTADFTGHAL 190
Query: 377 A----GGNNSLPCLEGVKECKKFLMSLGRYGNTPFLWPMYGSGELPQCFCRLCAVFGGVY 544
A + + P V++ + + SL RYG +P+L+P+YG GELPQ F RL A++GG Y
Sbjct: 191 ALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTY 250
Query: 545 CLNRPIDKVETKTVDEGKTV 604
L++P+D++ ++ GK +
Sbjct: 251 MLDKPVDEI---VMENGKAI 267
>Z99281-32|CAB16511.1| 444|Caenorhabditis elegans Hypothetical
protein Y57G11C.10a protein.
Length = 444
Score = 126 bits (305), Expect = 1e-29
Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 5/200 (2%)
Frame = +2
Query: 20 RKFNIDTTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCSRADVFAT 199
R +N+D PK L + GPLV+LLI + + RY EF+ + ++ VP + AT
Sbjct: 71 RDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKVPADEMEALAT 130
Query: 200 EAVGIVEKRMLMKMLTSIVGYSEEEMNN-EFKDWNNKTLKEYLTHKGLTPNLIHYILYAI 376
+G+ EKR K L + + E + + + D +N T+++ GL N + +A+
Sbjct: 131 SLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDENTADFTGHAL 190
Query: 377 A----GGNNSLPCLEGVKECKKFLMSLGRYGNTPFLWPMYGSGELPQCFCRLCAVFGGVY 544
A + + P V++ + + SL RYG +P+L+P+YG GELPQ F RL A++GG Y
Sbjct: 191 ALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTY 250
Query: 545 CLNRPIDKVETKTVDEGKTV 604
L++P+D++ ++ GK +
Sbjct: 251 MLDKPVDEI---VMENGKAI 267
>U00002-1|AAA17051.1| 444|Caenorhabditis elegans rabGDI protein.
Length = 444
Score = 126 bits (305), Expect = 1e-29
Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 5/200 (2%)
Frame = +2
Query: 20 RKFNIDTTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCSRADVFAT 199
R +N+D PK L + GPLV+LLI + + RY EF+ + ++ VP + AT
Sbjct: 71 RDWNVDLIPKFLMANGPLVKLLIHTGVTRYLEFKSIEASFVVKGGKIYKVPADEMEALAT 130
Query: 200 EAVGIVEKRMLMKMLTSIVGYSEEEMNN-EFKDWNNKTLKEYLTHKGLTPNLIHYILYAI 376
+G+ EKR K L + + E + + + D +N T+++ GL N + +A+
Sbjct: 131 SLMGMFEKRRFKKFLVWVQQFDENKEDTWQGLDPHNSTMQQVYEKFGLDENTADFTGHAL 190
Query: 377 A----GGNNSLPCLEGVKECKKFLMSLGRYGNTPFLWPMYGSGELPQCFCRLCAVFGGVY 544
A + + P V++ + + SL RYG +P+L+P+YG GELPQ F RL A++GG Y
Sbjct: 191 ALYRDDEHKNQPYAPAVEKIRLYSDSLARYGKSPYLYPLYGLGELPQGFARLSAIYGGTY 250
Query: 545 CLNRPIDKVETKTVDEGKTV 604
L++P+D++ ++ GK +
Sbjct: 251 MLDKPVDEI---VMENGKAI 267
>Z48230-4|CAO78721.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 38 TTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCS---RADVFATEAV 208
TT +++ P L++SN+ A +C R + L D P S DV + V
Sbjct: 330 TTHEIMHRVYPYGNFLMNSNVTT-AALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVV 388
Query: 209 GIVEKRMLMKMLT 247
I+ RM+MKM T
Sbjct: 389 NIMAMRMIMKMAT 401
>Z48230-3|CAA88263.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 38 TTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCS---RADVFATEAV 208
TT +++ P L++SN+ A +C R + L D P S DV + V
Sbjct: 330 TTHEIMHRVYPYGNFLMNSNVTT-AALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVV 388
Query: 209 GIVEKRMLMKMLT 247
I+ RM+MKM T
Sbjct: 389 NIMAMRMIMKMAT 401
>Z48006-7|CAO78729.1| 484|Caenorhabditis elegans Hypothetical
protein F19C6.4b protein.
Length = 484
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 38 TTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCS---RADVFATEAV 208
TT +++ P L++SN+ A +C R + L D P S DV + V
Sbjct: 330 TTHEIMHRVYPYGNFLMNSNVTT-AALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVV 388
Query: 209 GIVEKRMLMKMLT 247
I+ RM+MKM T
Sbjct: 389 NIMAMRMIMKMAT 401
>Z48006-6|CAA88051.1| 515|Caenorhabditis elegans Hypothetical
protein F19C6.4a protein.
Length = 515
Score = 31.5 bits (68), Expect = 0.63
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = +2
Query: 38 TTPKLLFSRGPLVELLISSNIARYAEFRCVTRVLTWLNDQLMPVPCS---RADVFATEAV 208
TT +++ P L++SN+ A +C R + L D P S DV + V
Sbjct: 330 TTHEIMHRVYPYGNFLMNSNVTT-AALQCARREVQMLGDTDAVKPISGWFNKDVAHEDVV 388
Query: 209 GIVEKRMLMKMLT 247
I+ RM+MKM T
Sbjct: 389 NIMAMRMIMKMAT 401
>U53139-9|AAW88402.1| 379|Caenorhabditis elegans Serpentine
receptor, class w protein68, isoform b protein.
Length = 379
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 335 GLTPNLIH-YILYAIAGGNNSLPCLE-GVKECKKFLMSLGRYGNTPFL 472
G+ N+ H +IL + NNS+ + G+ C LMSLG YG+ FL
Sbjct: 45 GVVVNIFHLFILTRKSMVNNSIHVMMIGISVCDLLLMSLGVYGHFDFL 92
>U53139-8|AAK18938.3| 338|Caenorhabditis elegans Serpentine
receptor, class w protein68, isoform a protein.
Length = 338
Score = 31.5 bits (68), Expect = 0.63
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 335 GLTPNLIH-YILYAIAGGNNSLPCLE-GVKECKKFLMSLGRYGNTPFL 472
G+ N+ H +IL + NNS+ + G+ C LMSLG YG+ FL
Sbjct: 45 GVVVNIFHLFILTRKSMVNNSIHVMMIGISVCDLLLMSLGVYGHFDFL 92
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 250 RCQHFHEHPFLDDTDRFGGEYVGSGARNRHQLIVEPGQDA 131
RC FH F+D+ ++ E V R H+++++P Q A
Sbjct: 49 RCLMFHPDRFVDNDEKKDAERVFVKLRRAHEVLLDPKQRA 88
>U00048-7|AAB53831.2| 752|Caenorhabditis elegans Hypothetical
protein C05D11.9 protein.
Length = 752
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = -3
Query: 142 GQDAGHASELSVARDVRRDQKLDKGSAREQQLWSCINVKFP 20
G +AG SEL++ +++ ++ L K R + WS ++VK+P
Sbjct: 450 GSEAGRESELAMKKELI-EKYLGKPHNRRCKHWSAVSVKYP 489
>Z81147-2|CAB03532.1| 372|Caenorhabditis elegans Hypothetical
protein T09E11.2 protein.
Length = 372
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +1
Query: 385 EQQLALP--RRCQGMQEVPNEPRKIWQHSILMAHVW 486
+Q+LAL R C GM + E RK+ Q + ++VW
Sbjct: 215 QQELALEACRTCPGMDLLDKEDRKVVQKYFVFSNVW 250
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 551 NRPIDKVETKTVDEGKTVVTIDSKSKKL 634
NRP+ K E K V+EG T++ S++ KL
Sbjct: 1338 NRPLIKKEEKVVEEGYTLMKCVSEAVKL 1365
>AL032644-5|CAA21669.2| 517|Caenorhabditis elegans Hypothetical
protein Y51H1A.5 protein.
Length = 517
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +2
Query: 368 YAIAGGNNSLPCLEGVKECKKFLMSLGRYGNTPFLWP 478
Y + GN + C+E + E L+S+ RY N F WP
Sbjct: 172 YDVHAGNGTQECVEQMGEGNVQLISIHRYENGHF-WP 207
>AC024696-9|AAK84508.1| 1900|Caenorhabditis elegans Hypothetical
protein F07B7.12 protein.
Length = 1900
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 551 NRPIDKVETKTVDEGKTVVTIDSKSKKL 634
NRP+ K E K V+EG T++ S++ KL
Sbjct: 1298 NRPLIKKEEKVVEEGYTLMKCVSEAVKL 1325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,627,387
Number of Sequences: 27780
Number of extensions: 331033
Number of successful extensions: 1321
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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