Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0227
(761 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44) 93 2e-19
SB_23948| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_55402| Best HMM Match : Vicilin_N (HMM E-Value=1) 30 2.4
SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6) 29 3.1
SB_44655| Best HMM Match : ATP-synt_E (HMM E-Value=4.4) 29 4.1
SB_52973| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_52952| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 29 5.5
SB_48056| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 29 5.5
SB_47064| Best HMM Match : Vicilin_N (HMM E-Value=2.4) 29 5.5
SB_44140| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 29 5.5
SB_41116| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 29 5.5
SB_19844| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 29 5.5
SB_13286| Best HMM Match : E-MAP-115 (HMM E-Value=4.8) 29 5.5
SB_10496| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 29 5.5
SB_819| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_59783| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 29 5.5
SB_59627| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 29 5.5
SB_59182| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_58568| Best HMM Match : Vicilin_N (HMM E-Value=3.4) 29 5.5
SB_50838| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 29 5.5
SB_44260| Best HMM Match : E-MAP-115 (HMM E-Value=5.5) 29 5.5
SB_43978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_36109| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 29 5.5
SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098) 29 5.5
SB_24905| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_22506| Best HMM Match : Vicilin_N (HMM E-Value=3.8) 29 5.5
SB_20026| Best HMM Match : Vicilin_N (HMM E-Value=1.2) 29 5.5
SB_19668| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_8541| Best HMM Match : Vicilin_N (HMM E-Value=1.7) 29 5.5
SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15) 29 5.5
SB_2780| Best HMM Match : Vicilin_N (HMM E-Value=1) 29 5.5
SB_623| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_19656| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 7.2
SB_30868| Best HMM Match : Vicilin_N (HMM E-Value=3.8) 28 7.2
SB_3722| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 28 7.2
SB_18269| Best HMM Match : CUB (HMM E-Value=7.4e-37) 28 9.5
SB_21670| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-17) 28 9.5
>SB_54838| Best HMM Match : Vitellogenin_N (HMM E-Value=4.76441e-44)
Length = 2581
Score = 93.1 bits (221), Expect = 2e-19
Identities = 65/232 (28%), Positives = 110/232 (47%), Gaps = 9/232 (3%)
Frame = -3
Query: 672 EMSYNIDALGAGGSVDEPVIYSQDSYLPRSVNFNLTVSLFGHDFNVLEFGGRQGNLDRVL 493
E S+ D L AGGSV +IY +S+ PRS + N+T+ + G N+ + R + ++
Sbjct: 1051 EGSFYSDILRAGGSVQGHLIYHPNSFFPRSTHLNITMDVLGASINLFDAAARFEGFELLM 1110
Query: 492 EHFLGPKSFLRTESPQAIYDSLVKRFEEAKKKV--EDGLTRGRRSVKT-EIDSFDKNLKA 322
E G ++ + A+++ + ++V G+ RGRRS+ T +I+ + NLK+
Sbjct: 1111 EQIFGADGYIPDDRVMAMFNLKPHEERDKTERVVQTPGILRGRRSILTDDINRVESNLKS 1170
Query: 321 EAAPYNNELDLD---IFVKLFGTDAVFLSFGDDKGFDF---NKILDDILGTCSSGISKLK 160
+ + VK+FG + SF D N D L T + G SK
Sbjct: 1171 LNKKMDTRKHAPSGAVSVKVFGNEMRLASFDDISWLQSEADNINFVDFLMTLAKGGSK-- 1228
Query: 159 HFQTDFRTHLLFLDAELAYPTSTGLPLHLNLVGSATAKLDLATNIDVRQIIY 4
F ++FLDAE PT GLPL L++ G++ +++ D+R + +
Sbjct: 1229 ----TFTKSMVFLDAETTVPTGLGLPLKLDVKGTSVVSVEMNGKFDIRNMFW 1276
>SB_23948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +2
Query: 203 SRILLKSNPLSSPKDKKTASVPNSFTKMSRSNSLLYGAASALRFLSNESISVLTDLRPL 379
SR ++ +N ++ D A++ + TK + ++LY A FLSNE SV TDL PL
Sbjct: 2 SRAVITANYINDLFDYYAAALEKNDTK---AMAMLY--ALPCTFLSNEGSSVYTDLAPL 55
>SB_55402| Best HMM Match : Vicilin_N (HMM E-Value=1)
Length = 174
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KVED LTR R ID D N A N E D
Sbjct: 118 QEAQQKVED-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_22009| Best HMM Match : Vicilin_N (HMM E-Value=0.6)
Length = 208
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N +A N E D
Sbjct: 157 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEEAPVGAENGEGD 196
>SB_44655| Best HMM Match : ATP-synt_E (HMM E-Value=4.4)
Length = 110
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 54 QEAQQKVDD-LTRQNRQQDVNIDEQDNNKDAPVGAENGEGD 93
>SB_52973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 973
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -3
Query: 354 EIDSFDKNLKAEAAPYNNELDLDIFVKLFGTDAVFLSFGDDKG---FDFNKILDDILGTC 184
+ID + + E AP+N+E D++ +V F D F + G N + D+ T
Sbjct: 773 DIDEVSQVRELEDAPFNDEYDIN-YVTTFDDDTTFFTSGASVSVVQLKLNNLETDVDNTL 831
Query: 183 SSGISKLKHFQTDF 142
+ ISK F F
Sbjct: 832 NQ-ISKYIRFSGSF 844
>SB_52952| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_48056| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_47064| Best HMM Match : Vicilin_N (HMM E-Value=2.4)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAAVGAENGEGD 157
>SB_44140| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_41116| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_19844| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 174
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_13286| Best HMM Match : E-MAP-115 (HMM E-Value=4.8)
Length = 176
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 119 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 158
>SB_10496| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_59783| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_59627| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_59182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 54 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 93
>SB_58568| Best HMM Match : Vicilin_N (HMM E-Value=3.4)
Length = 185
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_50838| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 174
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_44260| Best HMM Match : E-MAP-115 (HMM E-Value=5.5)
Length = 175
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVSIDEQDNNEDAPVGAENGEGD 157
>SB_43978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 54 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 93
>SB_36109| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 174
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_26181| Best HMM Match : DUF963 (HMM E-Value=0.00098)
Length = 620
Score = 28.7 bits (61), Expect = 5.5
Identities = 30/82 (36%), Positives = 40/82 (48%)
Frame = +2
Query: 191 PRISSRILLKSNPLSSPKDKKTASVPNSFTKMSRSNSLLYGAASALRFLSNESISVLTDL 370
P SS L S+PL+SP + S S + ++ S+ L ++S L S S LT
Sbjct: 172 PLTSSSPLTSSSPLTSPSPLTSPSPLTSSSPLTSSSPLT--SSSPL-----TSSSPLTSS 224
Query: 371 RPLVSPSSTFFLASSNLLTRLS 436
PL SPS L SS+ LT S
Sbjct: 225 SPLTSPSP---LTSSSPLTSSS 243
>SB_24905| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 108
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 52 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 91
>SB_22506| Best HMM Match : Vicilin_N (HMM E-Value=3.8)
Length = 174
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 157
>SB_20026| Best HMM Match : Vicilin_N (HMM E-Value=1.2)
Length = 167
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 111 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 150
>SB_19668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 160
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 105 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 144
>SB_8541| Best HMM Match : Vicilin_N (HMM E-Value=1.7)
Length = 165
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 108 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 147
>SB_8269| Best HMM Match : Involucrin (HMM E-Value=0.15)
Length = 334
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 260 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 299
>SB_2780| Best HMM Match : Vicilin_N (HMM E-Value=1)
Length = 228
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 172 QEAQQKVDD-LTRQNRQQDVNIDEQDNNEDAPVGAENGEGD 211
>SB_623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 42 QEAQQKVDD-LTRQNRQQDVNIDKQDNNEDAPVGAENGEGD 81
>SB_19656| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 168
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 112 QEAQQKVDD-LTRQNRQQDLNIDEQDNNEDAPVGAENGEGD 151
>SB_30868| Best HMM Match : Vicilin_N (HMM E-Value=3.8)
Length = 174
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 118 QEAQQKVDD-LTRQNRQQDLNIDEQDNNEDAPVGAENGEGD 157
>SB_3722| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 168
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 414 EEAKKKVEDGLTRGRRSVKTEIDSFDKNLKAEAAPYNNELD 292
+EA++KV+D LTR R ID D N A N E D
Sbjct: 112 QEAQQKVDD-LTRQNRQQDLNIDEQDNNEDAPVGAENGEGD 151
>SB_18269| Best HMM Match : CUB (HMM E-Value=7.4e-37)
Length = 1655
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 278 TKMSRSNSLLYGAASALRFLSNESISVLTDLRPLVSPSSTF 400
+ + ++++++ + + L+ L + S LTDL L SP STF
Sbjct: 824 SSLPQTSTIIDLSENLLKVLPPDQFSALTDLTTLESPHSTF 864
>SB_21670| Best HMM Match : Gal_Lectin (HMM E-Value=2.5e-17)
Length = 237
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 456 ESPQAIYDSLVKRFEEAKKKVEDGLTRGRRSVKTEIDSFDKN 331
E+P + + + E+ + EDG R R + TE++ D+N
Sbjct: 157 ETPTEMTEDIPTEVEDDDENEEDGDDRRRNHIPTEVEDDDEN 198
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,016,898
Number of Sequences: 59808
Number of extensions: 463300
Number of successful extensions: 1458
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2082369341
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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